RNA–Protein interactions for RNA: ENST00000484259.1

FXN-204, Transcript of frataxin, humanhuman

TSL 3

Gene FXN, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-204ENST00000484259 SPRYD3Q8NCJ5 442 aa5.41□□□□□ -1.54
FXN-204ENST00000484259 TSHZ2Q9NRE2 1034 aa5.41□□□□□ -1.54
FXN-204ENST00000484259 MIER1Q8N108 512 aa5.38□□□□□ -1.55
FXN-204ENST00000484259 L3MBTL3Q96JM7 780 aaPredicted RBP5.38□□□□□ -1.55
FXN-204ENST00000484259 ERBB3P21860 1342 aa5.38□□□□□ -1.55
FXN-204ENST00000484259 BRD2P25440 801 aaKnown RBP5.37□□□□□ -1.55
FXN-204ENST00000484259 PTGER2P43116 358 aa5.37□□□□□ -1.55
FXN-204ENST00000484259 PUS7Q96PZ0 661 aaKnown RBP5.37□□□□□ -1.55
FXN-204ENST00000484259 DNAJC5Q9H3Z4 198 aa5.37□□□□□ -1.55
FXN-204ENST00000484259 PKD2Q13563 968 aa5.36□□□□□ -1.55
FXN-204ENST00000484259 CHMP4AQ9BY43 222 aa5.36□□□□□ -1.55
FXN-204ENST00000484259 HOXB1P14653 301 aaPredicted RBP5.35□□□□□ -1.55
FXN-204ENST00000484259 ZNF710Q8N1W2 664 aa5.35□□□□□ -1.55
FXN-204ENST00000484259 UBE2Q2Q8WVN8 375 aa5.35□□□□□ -1.55
FXN-204ENST00000484259 PDCD7Q8N8D1 485 aaKnown RBP5.34□□□□□ -1.55
FXN-204ENST00000484259 ZMYND15Q9H091 742 aa5.34□□□□□ -1.55
FXN-204ENST00000484259 RSPH6AQ9H0K4 717 aa5.33□□□□□ -1.56
FXN-204ENST00000484259 PLA2G2EQ9NZK7 142 aa5.33□□□□□ -1.56
FXN-204ENST00000484259 IGSF3O75054 1194 aa5.32□□□□□ -1.56
FXN-204ENST00000484259 VARS2Q5ST30 1063 aaKnown RBP5.32□□□□□ -1.56
FXN-204ENST00000484259 HOXB3P14651 431 aaPredicted RBP5.31□□□□□ -1.56
FXN-204ENST00000484259 FAM212AQ96EL1 285 aa5.31□□□□□ -1.56
FXN-204ENST00000484259 GOLGA2Q08379 1002 aa5.3□□□□□ -1.56
FXN-204ENST00000484259 NUBP1P53384 320 aa5.29□□□□□ -1.56
FXN-204ENST00000484259 MKRN3Q13064 507 aaKnown RBP5.29□□□□□ -1.56
FXN-204ENST00000484259 DOK7Q18PE1 504 aa5.29□□□□□ -1.56
FXN-204ENST00000484259 TAF7LQ5H9L4 462 aa5.29□□□□□ -1.56
FXN-204ENST00000484259 PROM2Q8N271 834 aa5.29□□□□□ -1.56
FXN-204ENST00000484259 BRPF1P55201 1214 aaPredicted RBP5.28□□□□□ -1.56
FXN-204ENST00000484259 ZNF687Q8N1G0 1237 aa5.28□□□□□ -1.56
FXN-204ENST00000484259 PLCD3Q8N3E9 789 aa5.28□□□□□ -1.56
FXN-204ENST00000484259 BCL11AQ9H165 835 aa5.28□□□□□ -1.56
FXN-204ENST00000484259 ZBTB47Q9UFB7 747 aaPredicted RBP5.28□□□□□ -1.56
FXN-204ENST00000484259 RIMBP2O15034 1052 aa5.27□□□□□ -1.57
FXN-204ENST00000484259 ARID3AQ99856 593 aa5.27□□□□□ -1.57
FXN-204ENST00000484259 VASPP50552 380 aaPredicted RBP5.26□□□□□ -1.57
FXN-204ENST00000484259 ANKRD13DQ6ZTN6 518 aa5.26□□□□□ -1.57
FXN-204ENST00000484259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP5.26□□□□□ -1.57
FXN-204ENST00000484259 G3V3G9 751 aa5.25□□□□□ -1.57
FXN-204ENST00000484259 NEFLP07196 543 aa5.25□□□□□ -1.57
FXN-204ENST00000484259 DCAF8Q5TAQ9 597 aa5.25□□□□□ -1.57
FXN-204ENST00000484259 PCDHB8Q9UN66 801 aa5.25□□□□□ -1.57
FXN-204ENST00000484259 IFNLR1Q8IU57 520 aaPredicted RBP5.24□□□□□ -1.57
FXN-204ENST00000484259 PYGBP11216 843 aa5.23□□□□□ -1.57
FXN-204ENST00000484259 PDE4CQ08493 712 aa5.23□□□□□ -1.57
FXN-204ENST00000484259 NECTIN2Q92692 538 aa5.23□□□□□ -1.57
FXN-204ENST00000484259 POLR3GLQ9BT43 218 aa5.22□□□□□ -1.57
FXN-204ENST00000484259 HCSTQ9UBK5 93 aa5.22□□□□□ -1.57
FXN-204ENST00000484259 RAD21O60216 631 aa5.21□□□□□ -1.58
FXN-204ENST00000484259 ECM2O94769 699 aaPredicted RBP5.21□□□□□ -1.58
FXN-204ENST00000484259 NEUROD2Q15784 382 aa5.21□□□□□ -1.58
FXN-204ENST00000484259 KCTD17Q8N5Z5 321 aa5.21□□□□□ -1.58
FXN-204ENST00000484259 FAM9AQ8IZU1 332 aaPredicted RBP5.2□□□□□ -1.58
FXN-204ENST00000484259 BOLA1Q9Y3E2 137 aa5.2□□□□□ -1.58
FXN-204ENST00000484259 IRX2Q9BZI1 471 aaPredicted RBP5.19□□□□□ -1.58
FXN-204ENST00000484259 ZSWIM6Q9HCJ5 1215 aa5.19□□□□□ -1.58
FXN-204ENST00000484259 BCCIPQ9P287 314 aaKnown RBP eCLIP5.19□□□□□ -1.58
FXN-204ENST00000484259 NISCHQ9Y2I1 1504 aa5.18□□□□□ -1.58
FXN-204ENST00000484259 LSM11P83369 360 aaKnown RBP eCLIP5.18□□□□□ -1.58
FXN-204ENST00000484259 DPY19L2Q6NUT2 758 aa5.18□□□□□ -1.58
FXN-204ENST00000484259 DHX37Q8IY37 1157 aaKnown RBP5.18□□□□□ -1.58
FXN-204ENST00000484259 RGS22Q8NE09 1264 aa5.18□□□□□ -1.58
FXN-204ENST00000484259 ZNF467Q7Z7K2 595 aaPredicted RBP5.16□□□□□ -1.58
FXN-204ENST00000484259 ILDR1Q86SU0 546 aaPredicted RBP5.16□□□□□ -1.58
FXN-204ENST00000484259 C1orf115Q9H7X2 142 aa5.16□□□□□ -1.58
FXN-204ENST00000484259 E9PSI1 815 aa5.14□□□□□ -1.59
FXN-204ENST00000484259 APBB1O00213 710 aa5.14□□□□□ -1.59
FXN-204ENST00000484259 RGS20O76081 388 aa5.14□□□□□ -1.59
FXN-204ENST00000484259 ZNF326Q5BKZ1 582 aaKnown RBP5.14□□□□□ -1.59
FXN-204ENST00000484259 GPR153Q6NV75 609 aa5.14□□□□□ -1.59
FXN-204ENST00000484259 LMOD2Q6P5Q4 547 aa5.14□□□□□ -1.59
FXN-204ENST00000484259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.14□□□□□ -1.59
FXN-204ENST00000484259 CLSTN1O94985 981 aa5.13□□□□□ -1.59
FXN-204ENST00000484259 RBM25P49756 843 aaKnown RBP5.13□□□□□ -1.59
FXN-204ENST00000484259 TRAIPQ9BWF2 469 aa5.13□□□□□ -1.59
FXN-204ENST00000484259 MTMR7Q9Y216 660 aa5.13□□□□□ -1.59
FXN-204ENST00000484259 CHGAP10645 457 aaKnown RBP5.12□□□□□ -1.59
FXN-204ENST00000484259 RSPH4AQ5TD94 716 aa5.12□□□□□ -1.59
FXN-204ENST00000484259 TMCO4Q5TGY1 634 aa5.12□□□□□ -1.59
FXN-204ENST00000484259 PSEN1P49768 467 aa5.11□□□□□ -1.59
FXN-204ENST00000484259 ZNF316A6NFI3 1004 aaPredicted RBP5.1□□□□□ -1.59
FXN-204ENST00000484259 RGL2O15211 777 aa5.1□□□□□ -1.59
FXN-204ENST00000484259 P3H3Q8IVL6 736 aa5.1□□□□□ -1.59
FXN-204ENST00000484259 USP35Q9P2H5 1018 aa5.1□□□□□ -1.59
FXN-204ENST00000484259 ARID3CA6NKF2 412 aa5.09□□□□□ -1.59
FXN-204ENST00000484259 PBX2P40425 430 aa5.09□□□□□ -1.59
FXN-204ENST00000484259 MFAP1P55081 439 aaKnown RBP5.09□□□□□ -1.59
FXN-204ENST00000484259 PSMD1Q99460 953 aa5.09□□□□□ -1.59
FXN-204ENST00000484259 ARSIQ5FYB1 569 aa5.08□□□□□ -1.6
FXN-204ENST00000484259 TICAM2Q86XR7 235 aa5.08□□□□□ -1.6
FXN-204ENST00000484259 AEBP1Q8IUX7 1158 aa5.08□□□□□ -1.6
FXN-204ENST00000484259 SPOCK2Q92563 424 aa5.08□□□□□ -1.6
FXN-204ENST00000484259 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.08□□□□□ -1.6
FXN-204ENST00000484259 FAM177A1Q8N128 213 aaPredicted RBP5.07□□□□□ -1.6
FXN-204ENST00000484259 PKNOX2Q96KN3 472 aa5.07□□□□□ -1.6
FXN-204ENST00000484259 CABP2Q9NPB3 220 aa5.07□□□□□ -1.6
FXN-204ENST00000484259 ARID4BQ4LE39 1312 aaPredicted RBP5.06□□□□□ -1.6
FXN-204ENST00000484259 FOXD4L5Q5VV16 416 aaPredicted RBP5.06□□□□□ -1.6
FXN-204ENST00000484259 CC2D2BQ6DHV5 1058 aa5.06□□□□□ -1.6
FXN-204ENST00000484259 FOXD4L4Q8WXT5 416 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms