RNA–Protein interactions for RNA: ENST00000483974.5

C4A-255, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-255	ENST00000483974	PTPRM	P28827	1452 aa		33.5	■■■□□ 2.95
C4A-255	ENST00000483974	ZFYVE16	Q7Z3T8	1539 aa		33.49	■■■□□ 2.95
C4A-255	ENST00000483974	LRRIQ1	Q96JM4	1722 aa		33.49	■■■□□ 2.95
C4A-255	ENST00000483974	CCDC18	Q5T9S5	1454 aa		33.49	■■■□□ 2.95
C4A-255	ENST00000483974	SCAPER	Q9BY12	1400 aa		33.48	■■■□□ 2.95
C4A-255	ENST00000483974	POGZ	Q7Z3K3	1410 aa		33.47	■■■□□ 2.95
C4A-255	ENST00000483974	CASKIN1	Q8WXD9	1431 aa		33.47	■■■□□ 2.95
C4A-255	ENST00000483974	MADD	Q8WXG6	1647 aa		33.43	■■■□□ 2.94
C4A-255	ENST00000483974	PCF11	O94913	1555 aa	Known RBP	33.41	■■■□□ 2.94
C4A-255	ENST00000483974	ARHGAP5	Q13017	1502 aa		33.38	■■■□□ 2.93
C4A-255	ENST00000483974	YEATS2	Q9ULM3	1422 aa		33.37	■■■□□ 2.93
C4A-255	ENST00000483974	FYCO1	Q9BQS8	1478 aa		33.37	■■■□□ 2.93
C4A-255	ENST00000483974	ZNF518A	Q6AHZ1	1483 aa		33.36	■■■□□ 2.93
C4A-255	ENST00000483974	RIMS1	Q86UR5	1692 aa	Known RBP	33.33	■■■□□ 2.93
C4A-255	ENST00000483974	CDC42BPB	Q9Y5S2	1711 aa		33.32	■■■□□ 2.92
C4A-255	ENST00000483974	ATP10A	O60312	1499 aa		33.31	■■■□□ 2.92
C4A-255	ENST00000483974	PREX2	Q70Z35	1606 aa		33.29	■■■□□ 2.92
C4A-255	ENST00000483974	C9orf84	Q5VXU9	1444 aa		33.28	■■■□□ 2.92
C4A-255	ENST00000483974	KDM5C	P41229	1560 aa		33.27	■■■□□ 2.92
C4A-255	ENST00000483974	SIGLEC1	Q9BZZ2	1709 aa		33.26	■■■□□ 2.92
C4A-255	ENST00000483974	FER1L4	A9Z1Z3	1794 aa		33.24	■■■□□ 2.91
C4A-255	ENST00000483974	CDC42BPA	Q5VT25	1732 aa		33.19	■■■□□ 2.9
C4A-255	ENST00000483974	AFAP1	Q8N556	730 aa		33.18	■■■□□ 2.9
C4A-255	ENST00000483974	ABCC1	P33527	1531 aa		33.18	■■■□□ 2.9
C4A-255	ENST00000483974	MLH3	Q9UHC1	1453 aa		33.16	■■■□□ 2.9
C4A-255	ENST00000483974	LMTK3	Q96Q04	1460 aa		33.15	■■■□□ 2.9
C4A-255	ENST00000483974	ITSN2	Q9NZM3	1697 aa		33.15	■■■□□ 2.9
C4A-255	ENST00000483974	ARHGEF12	Q9NZN5	1544 aa		33.15	■■■□□ 2.9
C4A-255	ENST00000483974	RERE	Q9P2R6	1566 aa		33.14	■■■□□ 2.9
C4A-255	ENST00000483974	MLEC	Q14165	292 aa		33.14	■■■□□ 2.9
C4A-255	ENST00000483974	ILDR1	Q86SU0	546 aa	Predicted RBP	33.14	■■■□□ 2.9
C4A-255	ENST00000483974	MYT1L	Q9UL68	1186 aa		33.14	■■■□□ 2.9
C4A-255	ENST00000483974	DIP2C	Q9Y2E4	1556 aa		33.1	■■■□□ 2.89
C4A-255	ENST00000483974	TRAPPC8	Q9Y2L5	1435 aa		33.06	■■■□□ 2.88
C4A-255	ENST00000483974	ABCA6	Q8N139	1617 aa		33.05	■■■□□ 2.88
C4A-255	ENST00000483974	SETD1B	Q9UPS6	1966 aa	Known RBP	33.05	■■■□□ 2.88
C4A-255	ENST00000483974	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.03	■■■□□ 2.88
C4A-255	ENST00000483974	VPS8	Q8N3P4	1428 aa		33.02	■■■□□ 2.88
C4A-255	ENST00000483974	AGL	P35573	1532 aa		33.02	■■■□□ 2.88
C4A-255	ENST00000483974	MTUS2	Q5JR59	1369 aa		33.01	■■■□□ 2.88
C4A-255	ENST00000483974	PLPPR3	Q6T4P5	718 aa		33.01	■■■□□ 2.87
C4A-255	ENST00000483974	KIDINS220	Q9ULH0	1771 aa		33	■■■□□ 2.87
C4A-255	ENST00000483974	PLEKHH2	Q8IVE3	1493 aa		32.99	■■■□□ 2.87
C4A-255	ENST00000483974	SAMD9L	Q8IVG5	1584 aa		32.99	■■■□□ 2.87
C4A-255	ENST00000483974	CCNB3	Q8WWL7	1395 aa		32.97	■■■□□ 2.87
C4A-255	ENST00000483974	ZNF777	Q9ULD5	760 aa	Predicted RBP	32.97	■■■□□ 2.87
C4A-255	ENST00000483974	KIAA1107	Q9UPP5	1409 aa		32.96	■■■□□ 2.87
C4A-255	ENST00000483974	PREX1	Q8TCU6	1659 aa		32.96	■■■□□ 2.87
C4A-255	ENST00000483974	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.95	■■■□□ 2.87
C4A-255	ENST00000483974	SYCP2	Q9BX26	1530 aa		32.94	■■■□□ 2.86
C4A-255	ENST00000483974	EHBP1L1	Q8N3D4	1523 aa		32.92	■■■□□ 2.86
C4A-255	ENST00000483974	ESF1	Q9H501	851 aa	Known RBP	32.91	■■■□□ 2.86
C4A-255	ENST00000483974	SPAG9	O60271	1321 aa	Known RBP	32.89	■■■□□ 2.86
C4A-255	ENST00000483974	HSPA2	P54652	639 aa		32.88	■■■□□ 2.85
C4A-255	ENST00000483974	CNTLN	Q9NXG0	1405 aa		32.85	■■■□□ 2.85
C4A-255	ENST00000483974	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.85	■■■□□ 2.85
C4A-255	ENST00000483974	ATP7A	Q04656	1500 aa		32.83	■■■□□ 2.85
C4A-255	ENST00000483974	CEBPA	P49715	358 aa	Predicted RBP	32.83	■■■□□ 2.85
C4A-255	ENST00000483974	C3	P01024	1663 aa		32.82	■■■□□ 2.84
C4A-255	ENST00000483974	FBXO41	Q8TF61	875 aa		32.82	■■■□□ 2.84
C4A-255	ENST00000483974	TIAM1	Q13009	1591 aa		32.82	■■■□□ 2.84
C4A-255	ENST00000483974	UHRF1BP1	Q6BDS2	1440 aa		32.81	■■■□□ 2.84
C4A-255	ENST00000483974	INO80	Q9ULG1	1556 aa	Predicted RBP	32.8	■■■□□ 2.84
C4A-255	ENST00000483974	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.76	■■■□□ 2.83
C4A-255	ENST00000483974	MROH2A	A6NES4	1674 aa		32.75	■■■□□ 2.83
C4A-255	ENST00000483974	ADGB	Q8N7X0	1667 aa		32.73	■■■□□ 2.83
C4A-255	ENST00000483974	PLXNC1	O60486	1568 aa		32.73	■■■□□ 2.83
C4A-255	ENST00000483974	A2M	P01023	1474 aa		32.72	■■■□□ 2.83
C4A-255	ENST00000483974	DMRT2	Q9Y5R5	561 aa		32.71	■■■□□ 2.83
C4A-255	ENST00000483974	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.68	■■■□□ 2.82
C4A-255	ENST00000483974	MBD5	Q9P267	1494 aa		32.67	■■■□□ 2.82
C4A-255	ENST00000483974	NCOA2	Q15596	1464 aa		32.67	■■■□□ 2.82
C4A-255	ENST00000483974	NPAT	Q14207	1427 aa		32.66	■■■□□ 2.82
C4A-255	ENST00000483974	RSPH4A	Q5TD94	716 aa		32.65	■■■□□ 2.82
C4A-255	ENST00000483974	PPP6R1	Q9UPN7	881 aa		32.65	■■■□□ 2.82
C4A-255	ENST00000483974	STRC	Q7RTU9	1775 aa		32.64	■■■□□ 2.82
C4A-255	ENST00000483974	ZNF644	Q9H582	1327 aa	Predicted RBP	32.64	■■■□□ 2.82
C4A-255	ENST00000483974	MAP3K1	Q13233	1512 aa		32.62	■■■□□ 2.81
C4A-255	ENST00000483974	ZMYM3	Q14202	1370 aa		32.61	■■■□□ 2.81
C4A-255	ENST00000483974	KANK4	Q5T7N3	995 aa	Predicted RBP	32.61	■■■□□ 2.81
C4A-255	ENST00000483974	CCDC141	Q6ZP82	1450 aa		32.59	■■■□□ 2.81
C4A-255	ENST00000483974	CLTC	Q00610	1675 aa	Known RBP	32.59	■■■□□ 2.81
C4A-255	ENST00000483974	CAMSAP2	Q08AD1	1489 aa		32.57	■■■□□ 2.8
C4A-255	ENST00000483974	LRRC9	Q6ZRR7	1453 aa		32.54	■■■□□ 2.8
C4A-255	ENST00000483974	GGT6	Q6P531	493 aa		32.54	■■■□□ 2.8
C4A-255	ENST00000483974	CERK	Q8TCT0	537 aa		32.54	■■■□□ 2.8
C4A-255	ENST00000483974	DHX29	Q7Z478	1369 aa	Known RBP	32.53	■■■□□ 2.8
C4A-255	ENST00000483974	PTPRT	O14522	1441 aa		32.51	■■■□□ 2.8
C4A-255	ENST00000483974	ARHGEF5	Q12774	1597 aa		32.51	■■■□□ 2.79
C4A-255	ENST00000483974	FAM135A	Q9P2D6	1515 aa		32.47	■■■□□ 2.79
C4A-255	ENST00000483974	TSPY4	P0CV99	314 aa		32.46	■■■□□ 2.79
C4A-255	ENST00000483974	TSPY10	P0CW01	314 aa		32.46	■■■□□ 2.79
C4A-255	ENST00000483974	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.46	■■■□□ 2.79
C4A-255	ENST00000483974	NCOA1	Q15788	1441 aa		32.45	■■■□□ 2.79
C4A-255	ENST00000483974	ZNF142	P52746	1687 aa	Predicted RBP	32.45	■■■□□ 2.79
C4A-255	ENST00000483974	PTPRK	Q15262	1439 aa		32.43	■■■□□ 2.78
C4A-255	ENST00000483974	MYO3A	Q8NEV4	1616 aa		32.42	■■■□□ 2.78
C4A-255	ENST00000483974	CAMSAP1	Q5T5Y3	1602 aa		32.41	■■■□□ 2.78
C4A-255	ENST00000483974	KIF3B	O15066	747 aa		32.39	■■■□□ 2.78
C4A-255	ENST00000483974	MIA2	Q96PC5	1412 aa		32.39	■■■□□ 2.78

Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms