RNA–Protein interactions for RNA: ENST00000483921.1

VSNL1-206, Transcript of visinin like 1, humanhuman

TSL 4

Gene VSNL1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-206ENST00000483921 KIF14Q15058 1648 aa26.09■■□□□ 1.77
VSNL1-206ENST00000483921 CDK11AQ9UQ88 783 aaPredicted RBP26.07■■□□□ 1.76
VSNL1-206ENST00000483921 MAGI2Q86UL8 1455 aa26.06■■□□□ 1.76
VSNL1-206ENST00000483921 EFCAB2Q5VUJ9 269 aa26.05■■□□□ 1.76
VSNL1-206ENST00000483921 PLPPR3Q6T4P5 718 aa26.05■■□□□ 1.76
VSNL1-206ENST00000483921 MYO5CQ9NQX4 1742 aa26.05■■□□□ 1.76
VSNL1-206ENST00000483921 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
VSNL1-206ENST00000483921 MLECQ14165 292 aa26.04■■□□□ 1.76
VSNL1-206ENST00000483921 LRRIQ1Q96JM4 1722 aa26.04■■□□□ 1.76
VSNL1-206ENST00000483921 PCF11O94913 1555 aaKnown RBP26.03■■□□□ 1.76
VSNL1-206ENST00000483921 LMTK3Q96Q04 1460 aa26.03■■□□□ 1.76
VSNL1-206ENST00000483921 CLIP1P30622 1438 aa25.98■■□□□ 1.75
VSNL1-206ENST00000483921 ARHGAP5Q13017 1502 aa25.98■■□□□ 1.75
VSNL1-206ENST00000483921 ATP10AO60312 1499 aa25.96■■□□□ 1.75
VSNL1-206ENST00000483921 AFAP1Q8N556 730 aa25.94■■□□□ 1.74
VSNL1-206ENST00000483921 HSPA2P54652 639 aa25.93■■□□□ 1.74
VSNL1-206ENST00000483921 C9orf84Q5VXU9 1444 aa25.93■■□□□ 1.74
VSNL1-206ENST00000483921 CASKIN1Q8WXD9 1431 aa25.93■■□□□ 1.74
VSNL1-206ENST00000483921 ZNF518AQ6AHZ1 1483 aa25.91■■□□□ 1.74
VSNL1-206ENST00000483921 FER1L4A9Z1Z3 1794 aa25.91■■□□□ 1.74
VSNL1-206ENST00000483921 ARHGEF12Q9NZN5 1544 aa25.88■■□□□ 1.73
VSNL1-206ENST00000483921 CDC42BPBQ9Y5S2 1711 aa25.88■■□□□ 1.73
VSNL1-206ENST00000483921 KDM5CP41229 1560 aa25.88■■□□□ 1.73
VSNL1-206ENST00000483921 CCDC18Q5T9S5 1454 aa25.87■■□□□ 1.73
VSNL1-206ENST00000483921 MYT1LQ9UL68 1186 aa25.87■■□□□ 1.73
VSNL1-206ENST00000483921 FBXO41Q8TF61 875 aa25.84■■□□□ 1.73
VSNL1-206ENST00000483921 PREX2Q70Z35 1606 aa25.84■■□□□ 1.73
VSNL1-206ENST00000483921 DIP2CQ9Y2E4 1556 aa25.82■■□□□ 1.72
VSNL1-206ENST00000483921 TRAPPC8Q9Y2L5 1435 aa25.82■■□□□ 1.72
VSNL1-206ENST00000483921 CEBPAP49715 358 aaPredicted RBP25.82■■□□□ 1.72
VSNL1-206ENST00000483921 ABCC1P33527 1531 aa25.81■■□□□ 1.72
VSNL1-206ENST00000483921 FYCO1Q9BQS8 1478 aa25.8■■□□□ 1.72
VSNL1-206ENST00000483921 ABCA6Q8N139 1617 aa25.79■■□□□ 1.72
VSNL1-206ENST00000483921 MLH3Q9UHC1 1453 aa25.78■■□□□ 1.72
VSNL1-206ENST00000483921 ITSN2Q9NZM3 1697 aa25.76■■□□□ 1.71
VSNL1-206ENST00000483921 CDC42BPAQ5VT25 1732 aa25.76■■□□□ 1.71
VSNL1-206ENST00000483921 REREQ9P2R6 1566 aa25.73■■□□□ 1.71
VSNL1-206ENST00000483921 ZNF777Q9ULD5 760 aaPredicted RBP25.72■■□□□ 1.71
VSNL1-206ENST00000483921 PREX1Q8TCU6 1659 aa25.7■■□□□ 1.7
VSNL1-206ENST00000483921 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
VSNL1-206ENST00000483921 GPATCH8Q9UKJ3 1502 aaKnown RBP25.68■■□□□ 1.7
VSNL1-206ENST00000483921 SAMD9LQ8IVG5 1584 aa25.68■■□□□ 1.7
VSNL1-206ENST00000483921 AGLP35573 1532 aa25.67■■□□□ 1.7
VSNL1-206ENST00000483921 SYCP2Q9BX26 1530 aa25.65■■□□□ 1.7
VSNL1-206ENST00000483921 HNRNPMP52272 730 aaKnown RBP eCLIP25.64■■□□□ 1.77e-6■■□□□ 11.4
VSNL1-206ENST00000483921 UHRF1BP1Q6BDS2 1440 aa25.63■■□□□ 1.69
VSNL1-206ENST00000483921 C3P01024 1663 aa25.61■■□□□ 1.69
VSNL1-206ENST00000483921 ESF1Q9H501 851 aaKnown RBP25.6■■□□□ 1.69
VSNL1-206ENST00000483921 SPAG9O60271 1321 aaKnown RBP25.6■■□□□ 1.69
VSNL1-206ENST00000483921 CERKQ8TCT0 537 aa25.59■■□□□ 1.69
VSNL1-206ENST00000483921 CFDP1Q9UEE9 299 aaPredicted RBP25.59■■□□□ 1.69
VSNL1-206ENST00000483921 MTUS2Q5JR59 1369 aa25.58■■□□□ 1.69
VSNL1-206ENST00000483921 CCNB3Q8WWL7 1395 aa25.58■■□□□ 1.69
VSNL1-206ENST00000483921 SETD1BQ9UPS6 1966 aaKnown RBP25.56■■□□□ 1.68
VSNL1-206ENST00000483921 STRCQ7RTU9 1775 aa25.56■■□□□ 1.68
VSNL1-206ENST00000483921 KIAA1107Q9UPP5 1409 aa25.54■■□□□ 1.68
VSNL1-206ENST00000483921 ATP7AQ04656 1500 aa25.53■■□□□ 1.68
VSNL1-206ENST00000483921 CNTLNQ9NXG0 1405 aa25.52■■□□□ 1.68
VSNL1-206ENST00000483921 PLEKHH2Q8IVE3 1493 aa25.52■■□□□ 1.68
VSNL1-206ENST00000483921 ZNF644Q9H582 1327 aaPredicted RBP25.51■■□□□ 1.67
VSNL1-206ENST00000483921 SUPT6HQ7KZ85 1726 aaKnown RBP25.51■■□□□ 1.67
VSNL1-206ENST00000483921 INO80Q9ULG1 1556 aaPredicted RBP25.5■■□□□ 1.67
VSNL1-206ENST00000483921 TIAM1Q13009 1591 aa25.49■■□□□ 1.67
VSNL1-206ENST00000483921 CEP162Q5TB80 1403 aa25.49■■□□□ 1.67
VSNL1-206ENST00000483921 DMRT2Q9Y5R5 561 aa25.48■■□□□ 1.67
VSNL1-206ENST00000483921 EHBP1L1Q8N3D4 1523 aa25.47■■□□□ 1.67
VSNL1-206ENST00000483921 A2MP01023 1474 aa25.47■■□□□ 1.67
VSNL1-206ENST00000483921 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
VSNL1-206ENST00000483921 ZMYM3Q14202 1370 aa25.45■■□□□ 1.67
VSNL1-206ENST00000483921 MROH2AA6NES4 1674 aa25.42■■□□□ 1.66
VSNL1-206ENST00000483921 MBD5Q9P267 1494 aa25.42■■□□□ 1.66
VSNL1-206ENST00000483921 GGT6Q6P531 493 aa25.42■■□□□ 1.66
VSNL1-206ENST00000483921 PTPRTO14522 1441 aa25.41■■□□□ 1.66
VSNL1-206ENST00000483921 CLTCQ00610 1675 aaKnown RBP25.41■■□□□ 1.66
VSNL1-206ENST00000483921 NPATQ14207 1427 aa25.4■■□□□ 1.66
VSNL1-206ENST00000483921 NCOA1Q15788 1441 aa25.39■■□□□ 1.66
VSNL1-206ENST00000483921 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
VSNL1-206ENST00000483921 CAMSAP1Q5T5Y3 1602 aa25.35■■□□□ 1.65
VSNL1-206ENST00000483921 NCOA2Q15596 1464 aa25.34■■□□□ 1.65
VSNL1-206ENST00000483921 PTPRKQ15262 1439 aa25.33■■□□□ 1.65
VSNL1-206ENST00000483921 RTEL1-TNFRSF6BF6WH68 1400 aa25.31■■□□□ 1.64
VSNL1-206ENST00000483921 NCKAP5LQ9HCH0 1330 aa25.31■■□□□ 1.64
VSNL1-206ENST00000483921 CAMSAP2Q08AD1 1489 aa25.3■■□□□ 1.64
VSNL1-206ENST00000483921 LTBP4Q8N2S1 1624 aa25.3■■□□□ 1.64
VSNL1-206ENST00000483921 MYO3AQ8NEV4 1616 aa25.3■■□□□ 1.64
VSNL1-206ENST00000483921 LOC105371045A0A1W2PR82 267 aa25.29■■□□□ 1.64
VSNL1-206ENST00000483921 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
VSNL1-206ENST00000483921 CCDC141Q6ZP82 1450 aa25.28■■□□□ 1.64
VSNL1-206ENST00000483921 PPP6R1Q9UPN7 881 aa25.26■■□□□ 1.63
VSNL1-206ENST00000483921 CEP170BQ9Y4F5 1589 aaPredicted RBP25.26■■□□□ 1.63
VSNL1-206ENST00000483921 ZNF142P52746 1687 aaPredicted RBP25.25■■□□□ 1.63
VSNL1-206ENST00000483921 KIF3BO15066 747 aa25.24■■□□□ 1.63
VSNL1-206ENST00000483921 VPS8Q8N3P4 1428 aa25.21■■□□□ 1.63
VSNL1-206ENST00000483921 PLA2R1Q13018 1463 aa25.2■■□□□ 1.62
VSNL1-206ENST00000483921 LRRC9Q6ZRR7 1453 aa25.2■■□□□ 1.62
VSNL1-206ENST00000483921 ZNF335Q9H4Z2 1342 aaPredicted RBP25.19■■□□□ 1.62
VSNL1-206ENST00000483921 RSPH4AQ5TD94 716 aa25.19■■□□□ 1.62
VSNL1-206ENST00000483921 FBXO31Q5XUX0 539 aaPredicted RBP25.19■■□□□ 1.62
VSNL1-206ENST00000483921 SENP3Q9H4L4 574 aaPredicted RBP25.19■■□□□ 1.62
VSNL1-206ENST00000483921 TCOF1Q13428 1488 aaKnown RBP25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms