RNA–Protein interactions for RNA: ENST00000483921.1

VSNL1-206, Transcript of visinin like 1, humanhuman

TSL 4

Gene VSNL1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-206ENST00000483921 NISCHQ9Y2I1 1504 aa39.79■■■■□ 3.96
VSNL1-206ENST00000483921 ABCC9O60706 1549 aa35.81■■■■□ 3.32
VSNL1-206ENST00000483921 CCDC180Q9P1Z9 1646 aa35.65■■■■□ 3.3
VSNL1-206ENST00000483921 RB1CC1Q8TDY2 1594 aa33.98■■■■□ 3.03
VSNL1-206ENST00000483921 NACADO15069 1562 aa33.73■■■□□ 2.99
VSNL1-206ENST00000483921 DCAF8L2P0C7V8 631 aa33.68■■■□□ 2.98
VSNL1-206ENST00000483921 DNAJC5BQ9UF47 199 aa33.66■■■□□ 2.98
VSNL1-206ENST00000483921 PABPN1Q86U42 306 aaKnown RBP eCLIP33.37■■■□□ 2.93
VSNL1-206ENST00000483921 UNC13AQ9UPW8 1703 aa33.23■■■□□ 2.91
VSNL1-206ENST00000483921 MYO15BQ96JP2 1530 aa33.22■■■□□ 2.91
VSNL1-206ENST00000483921 BICRAQ9NZM4 1560 aa33.04■■■□□ 2.88
VSNL1-206ENST00000483921 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
VSNL1-206ENST00000483921 DCAF1Q9Y4B6 1507 aa32.81■■■□□ 2.84
VSNL1-206ENST00000483921 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
VSNL1-206ENST00000483921 SHROOM4Q9ULL8 1493 aa32.49■■■□□ 2.79
VSNL1-206ENST00000483921 CC2D2AQ9P2K1 1620 aa32.3■■■□□ 2.76
VSNL1-206ENST00000483921 CECR2Q9BXF3 1484 aa32.23■■■□□ 2.75
VSNL1-206ENST00000483921 EIF4G1Q04637 1599 aaKnown RBP32.22■■■□□ 2.75
VSNL1-206ENST00000483921 NCAPD3P42695 1498 aa31.17■■■□□ 2.58
VSNL1-206ENST00000483921 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
VSNL1-206ENST00000483921 SMARCA4P51532 1647 aa31.04■■■□□ 2.56
VSNL1-206ENST00000483921 SMARCA2P51531 1590 aa30.96■■■□□ 2.55
VSNL1-206ENST00000483921 HMGXB3Q12766 1538 aa30.91■■■□□ 2.54
VSNL1-206ENST00000483921 ERCC6Q03468 1493 aa30.88■■■□□ 2.53
VSNL1-206ENST00000483921 DNAJC5Q9H3Z4 198 aa30.86■■■□□ 2.53
VSNL1-206ENST00000483921 BAZ1AQ9NRL2 1556 aaPredicted RBP30.86■■■□□ 2.53
VSNL1-206ENST00000483921 CUX2O14529 1486 aa30.79■■■□□ 2.52
VSNL1-206ENST00000483921 BAZ1BQ9UIG0 1483 aaKnown RBP30.78■■■□□ 2.52
VSNL1-206ENST00000483921 NESP48681 1621 aa30.77■■■□□ 2.52
VSNL1-206ENST00000483921 PEG3Q9GZU2 1588 aa30.71■■■□□ 2.51
VSNL1-206ENST00000483921 MROH2BQ7Z745 1585 aa30.7■■■□□ 2.5
VSNL1-206ENST00000483921 LAMC3Q9Y6N6 1575 aa30.45■■■□□ 2.46
VSNL1-206ENST00000483921 THOC2Q8NI27 1593 aaKnown RBP30.41■■■□□ 2.46
VSNL1-206ENST00000483921 WIZO95785 1651 aa30.32■■■□□ 2.44
VSNL1-206ENST00000483921 KIF21AQ7Z4S6 1674 aa30.31■■■□□ 2.44
VSNL1-206ENST00000483921 PDS5BQ9NTI5 1447 aa30.29■■■□□ 2.44
VSNL1-206ENST00000483921 CADPSQ9ULU8 1353 aa30.24■■■□□ 2.43
VSNL1-206ENST00000483921 MRC2Q9UBG0 1479 aa30.06■■■□□ 2.4
VSNL1-206ENST00000483921 RSF1Q96T23 1441 aaPredicted RBP30.05■■■□□ 2.4
VSNL1-206ENST00000483921 WDR62O43379 1518 aa29.97■■■□□ 2.39
VSNL1-206ENST00000483921 CEP164Q9UPV0 1460 aa29.93■■■□□ 2.38
VSNL1-206ENST00000483921 FANCD2Q9BXW9 1451 aa29.91■■■□□ 2.38
VSNL1-206ENST00000483921 TOP2AP11388 1531 aaKnown RBP29.9■■■□□ 2.38
VSNL1-206ENST00000483921 CFTRP13569 1480 aa29.88■■■□□ 2.37
VSNL1-206ENST00000483921 URB2Q14146 1524 aaKnown RBP29.68■■■□□ 2.34
VSNL1-206ENST00000483921 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
VSNL1-206ENST00000483921 TRIM41Q8WV44 630 aa29.56■■■□□ 2.32
VSNL1-206ENST00000483921 PRDM2Q13029 1718 aa29.51■■■□□ 2.31
VSNL1-206ENST00000483921 AEBP2Q6ZN18 517 aaPredicted RBP29.47■■■□□ 2.31
VSNL1-206ENST00000483921 OSCARQ8IYS5 282 aa29.41■■■□□ 2.3
VSNL1-206ENST00000483921 TOPBP1Q92547 1522 aa29.34■■■□□ 2.29
VSNL1-206ENST00000483921 ZNF608Q9ULD9 1512 aaPredicted RBP29.34■■■□□ 2.29
VSNL1-206ENST00000483921 IFT140Q96RY7 1462 aa29.32■■■□□ 2.28
VSNL1-206ENST00000483921 DNMBPQ6XZF7 1577 aa29.2■■■□□ 2.26
VSNL1-206ENST00000483921 ABCC8Q09428 1581 aa29.19■■■□□ 2.26
VSNL1-206ENST00000483921 EIF4G3O43432 1585 aaKnown RBP29.13■■■□□ 2.25
VSNL1-206ENST00000483921 TARBP1Q13395 1621 aaKnown RBP29.06■■■□□ 2.24
VSNL1-206ENST00000483921 AQRO60306 1485 aaKnown RBP eCLIP29.06■■■□□ 2.24
VSNL1-206ENST00000483921 RIMBP3CA6NJZ7 1639 aa29.05■■■□□ 2.24
VSNL1-206ENST00000483921 RIMBP3BA6NNM3 1639 aa29.05■■■□□ 2.24
VSNL1-206ENST00000483921 RIMBP3Q9UFD9 1639 aa29.05■■■□□ 2.24
VSNL1-206ENST00000483921 POLA1P09884 1462 aaPredicted RBP29.04■■■□□ 2.24
VSNL1-206ENST00000483921 RAD54L2Q9Y4B4 1467 aa28.97■■■□□ 2.23
VSNL1-206ENST00000483921 ARHGEF11O15085 1522 aa28.96■■■□□ 2.23
VSNL1-206ENST00000483921 CHD1O14646 1710 aa28.91■■■□□ 2.22
VSNL1-206ENST00000483921 SOGA1O94964 1423 aa28.9■■■□□ 2.22
VSNL1-206ENST00000483921 TDRD9Q8NDG6 1382 aaKnown RBP28.89■■■□□ 2.22
VSNL1-206ENST00000483921 FBLN2P98095 1184 aa28.89■■■□□ 2.22
VSNL1-206ENST00000483921 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
VSNL1-206ENST00000483921 CUX1P39880 1505 aa28.84■■■□□ 2.21
VSNL1-206ENST00000483921 CYB5RLQ6IPT4 315 aa28.78■■■□□ 2.2
VSNL1-206ENST00000483921 SNAPC4Q5SXM2 1469 aa28.76■■■□□ 2.19
VSNL1-206ENST00000483921 SUPT5HO00267 1087 aaKnown RBP28.74■■■□□ 2.19
VSNL1-206ENST00000483921 ARAP1Q96P48 1450 aa28.7■■■□□ 2.18
VSNL1-206ENST00000483921 WDR97A6NE52 1622 aa28.69■■■□□ 2.18
VSNL1-206ENST00000483921 GRIN2BQ13224 1484 aa28.64■■■□□ 2.17
VSNL1-206ENST00000483921 CHMP7Q8WUX9 453 aaPredicted RBP28.63■■■□□ 2.17
VSNL1-206ENST00000483921 MAGI1Q96QZ7 1491 aaPredicted RBP28.62■■■□□ 2.17
VSNL1-206ENST00000483921 CLASP1Q7Z460 1538 aa28.59■■■□□ 2.17
VSNL1-206ENST00000483921 SYNJ2O15056 1496 aa28.54■■■□□ 2.16
VSNL1-206ENST00000483921 GAPVD1Q14C86 1478 aa28.54■■■□□ 2.16
VSNL1-206ENST00000483921 SYNJ1O43426 1573 aa28.54■■■□□ 2.16
VSNL1-206ENST00000483921 PBRM1Q86U86 1689 aa28.51■■■□□ 2.16
VSNL1-206ENST00000483921 ABCA10Q8WWZ4 1543 aa28.5■■■□□ 2.15
VSNL1-206ENST00000483921 ABCA5Q8WWZ7 1642 aa28.47■■■□□ 2.15
VSNL1-206ENST00000483921 TRHP20396 242 aaPredicted RBP28.46■■■□□ 2.15
VSNL1-206ENST00000483921 WRNQ14191 1432 aaPredicted RBP eCLIP28.37■■■□□ 2.13
VSNL1-206ENST00000483921 TOP2BQ02880 1626 aa28.32■■■□□ 2.12
VSNL1-206ENST00000483921 BIVM-ERCC5R4GMW8 1640 aa28.32■■■□□ 2.12
VSNL1-206ENST00000483921 GRIN2AQ12879 1464 aa28.28■■■□□ 2.12
VSNL1-206ENST00000483921 ADAMTS12P58397 1594 aa28.26■■■□□ 2.11
VSNL1-206ENST00000483921 ERCC6L2Q5T890 1561 aa28.2■■■□□ 2.11
VSNL1-206ENST00000483921 CEP170Q5SW79 1584 aa28.2■■■□□ 2.1
VSNL1-206ENST00000483921 NUP160Q12769 1436 aa28.18■■■□□ 2.1
VSNL1-206ENST00000483921 FHAD1B1AJZ9 1412 aa28.17■■■□□ 2.1
VSNL1-206ENST00000483921 ERICH3Q5RHP9 1530 aa28.12■■■□□ 2.09
VSNL1-206ENST00000483921 SHROOM2Q13796 1616 aa28.04■■■□□ 2.08
VSNL1-206ENST00000483921 CHIC1Q5VXU3 224 aa28■■■□□ 2.07
VSNL1-206ENST00000483921 PRG4Q92954 1404 aaPredicted RBP27.93■■■□□ 2.06
VSNL1-206ENST00000483921 JPH4Q96JJ6 628 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms