RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-208ENST00000483904 PSEN1P49768 467 aa9.88□□□□□ -0.83
NCOA1-208ENST00000483904 TMEM106CQ9BVX2 250 aa9.88□□□□□ -0.83
NCOA1-208ENST00000483904 LMOD2Q6P5Q4 547 aa9.87□□□□□ -0.83
NCOA1-208ENST00000483904 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.86□□□□□ -0.83
NCOA1-208ENST00000483904 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
NCOA1-208ENST00000483904 IRX5P78411 483 aaPredicted RBP9.84□□□□□ -0.83
NCOA1-208ENST00000483904 TMEM121BQ9BXQ6 578 aaPredicted RBP9.83□□□□□ -0.84
NCOA1-208ENST00000483904 MFRPQ9BY79 579 aa9.81□□□□□ -0.84
NCOA1-208ENST00000483904 SNPHO15079 494 aa9.8□□□□□ -0.84
NCOA1-208ENST00000483904 OCEL1Q9H607 264 aa9.8□□□□□ -0.84
NCOA1-208ENST00000483904 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
NCOA1-208ENST00000483904 SPNS2Q8IVW8 549 aa9.79□□□□□ -0.84
NCOA1-208ENST00000483904 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
NCOA1-208ENST00000483904 KCNV2Q8TDN2 545 aa9.77□□□□□ -0.85
NCOA1-208ENST00000483904 WDR70Q9NW82 654 aa9.77□□□□□ -0.85
NCOA1-208ENST00000483904 EFCAB3Q8N7B9 438 aa9.76□□□□□ -0.85
NCOA1-208ENST00000483904 CABP2Q9NPB3 220 aa9.75□□□□□ -0.85
NCOA1-208ENST00000483904 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.75□□□□□ -0.85
NCOA1-208ENST00000483904 FBXO22Q8NEZ5 403 aa9.74□□□□□ -0.85
NCOA1-208ENST00000483904 PPP1R37O75864 691 aa9.73□□□□□ -0.85
NCOA1-208ENST00000483904 SUPT5HO00267 1087 aaKnown RBP9.72□□□□□ -0.85
NCOA1-208ENST00000483904 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
NCOA1-208ENST00000483904 NEUROD2Q15784 382 aa9.71□□□□□ -0.86
NCOA1-208ENST00000483904 SOX12O15370 315 aa9.7□□□□□ -0.86
NCOA1-208ENST00000483904 ZC3H15Q8WU90 426 aaKnown RBP9.69□□□□□ -0.86
NCOA1-208ENST00000483904 MARVELD3Q96A59 401 aa9.69□□□□□ -0.86
NCOA1-208ENST00000483904 PODXL2Q9NZ53 605 aa9.69□□□□□ -0.86
NCOA1-208ENST00000483904 RANGAP1P46060 587 aaPredicted RBP9.68□□□□□ -0.86
NCOA1-208ENST00000483904 NLRP6P59044 892 aa9.68□□□□□ -0.86
NCOA1-208ENST00000483904 ARHGEF1Q92888 912 aaKnown RBP9.67□□□□□ -0.86
NCOA1-208ENST00000483904 MS4A4AQ96JQ5 239 aa9.65□□□□□ -0.86
NCOA1-208ENST00000483904 L3MBTL3Q96JM7 780 aaPredicted RBP9.63□□□□□ -0.87
NCOA1-208ENST00000483904 PDCD7Q8N8D1 485 aaKnown RBP9.62□□□□□ -0.87
NCOA1-208ENST00000483904 EMP3P54852 163 aa9.61□□□□□ -0.87
NCOA1-208ENST00000483904 C3orf67Q6ZVT6 689 aa9.61□□□□□ -0.87
NCOA1-208ENST00000483904 SLC24A3Q9HC58 644 aa9.61□□□□□ -0.87
NCOA1-208ENST00000483904 TESPA1A2RU30 521 aaPredicted RBP9.59□□□□□ -0.87
NCOA1-208ENST00000483904 MKRN3Q13064 507 aaKnown RBP9.58□□□□□ -0.88
NCOA1-208ENST00000483904 GOLGA2Q08379 1002 aa9.57□□□□□ -0.88
NCOA1-208ENST00000483904 ZMYND10O75800 440 aa9.56□□□□□ -0.88
NCOA1-208ENST00000483904 KRTAP3-3Q9BYR6 98 aa9.56□□□□□ -0.88
NCOA1-208ENST00000483904 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
NCOA1-208ENST00000483904 NCKAP5LQ9HCH0 1330 aa9.56□□□□□ -0.88
NCOA1-208ENST00000483904 POTEB3A0JP26 581 aa9.55□□□□□ -0.88
NCOA1-208ENST00000483904 POTEBQ6S5H4 581 aa9.55□□□□□ -0.88
NCOA1-208ENST00000483904 HS3ST6Q96QI5 342 aa9.55□□□□□ -0.88
NCOA1-208ENST00000483904 FAM205CA6NFA0 338 aa9.54□□□□□ -0.88
NCOA1-208ENST00000483904 E2F4Q16254 413 aa9.54□□□□□ -0.88
NCOA1-208ENST00000483904 ILDR1Q86SU0 546 aaPredicted RBP9.54□□□□□ -0.88
NCOA1-208ENST00000483904 UBTFP17480 764 aaKnown RBP9.53□□□□□ -0.88
NCOA1-208ENST00000483904 SMYD5Q6GMV2 418 aa9.53□□□□□ -0.88
NCOA1-208ENST00000483904 ZMYND15Q9H091 742 aa9.53□□□□□ -0.88
NCOA1-208ENST00000483904 RSPH6AQ9H0K4 717 aa9.53□□□□□ -0.88
NCOA1-208ENST00000483904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.53□□□□□ -0.88
NCOA1-208ENST00000483904 SEMA3EO15041 775 aa9.5□□□□□ -0.89
NCOA1-208ENST00000483904 BARGINQ6ZT62 677 aa9.49□□□□□ -0.89
NCOA1-208ENST00000483904 LARP6Q9BRS8 491 aaKnown RBP9.49□□□□□ -0.89
NCOA1-208ENST00000483904 CRISPLD2Q9H0B8 497 aa9.49□□□□□ -0.89
NCOA1-208ENST00000483904 PDE4AP27815 886 aa9.47□□□□□ -0.89
NCOA1-208ENST00000483904 MFSD10Q14728 455 aa9.47□□□□□ -0.89
NCOA1-208ENST00000483904 DPY19L2Q6NUT2 758 aa9.47□□□□□ -0.89
NCOA1-208ENST00000483904 TRIM26Q12899 539 aaPredicted RBP9.45□□□□□ -0.9
NCOA1-208ENST00000483904 AK7Q96M32 723 aa9.45□□□□□ -0.9
NCOA1-208ENST00000483904 ARIH1Q9Y4X5 557 aaPredicted RBP9.44□□□□□ -0.9
NCOA1-208ENST00000483904 HOXB3P14651 431 aaPredicted RBP9.43□□□□□ -0.9
NCOA1-208ENST00000483904 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
NCOA1-208ENST00000483904 HOXB1P14653 301 aaPredicted RBP9.41□□□□□ -0.9
NCOA1-208ENST00000483904 G3V3G9 751 aa9.4□□□□□ -0.9
NCOA1-208ENST00000483904 BOLA1Q9Y3E2 137 aa9.4□□□□□ -0.9
NCOA1-208ENST00000483904 CAMK2BQ13554 666 aa9.39□□□□□ -0.91
NCOA1-208ENST00000483904 NPM2Q86SE8 214 aaKnown RBP9.38□□□□□ -0.91
NCOA1-208ENST00000483904 MICALL2Q8IY33 904 aa9.38□□□□□ -0.91
NCOA1-208ENST00000483904 ZNF710Q8N1W2 664 aa9.38□□□□□ -0.91
NCOA1-208ENST00000483904 GPHNQ9NQX3 736 aaPredicted RBP9.37□□□□□ -0.91
NCOA1-208ENST00000483904 ERBB3P21860 1342 aa9.36□□□□□ -0.91
NCOA1-208ENST00000483904 HRCP23327 699 aa9.36□□□□□ -0.91
NCOA1-208ENST00000483904 DOK7Q18PE1 504 aa9.36□□□□□ -0.91
NCOA1-208ENST00000483904 KDM4CQ9H3R0 1056 aa9.36□□□□□ -0.91
NCOA1-208ENST00000483904 GPBP1L1Q9HC44 474 aaPredicted RBP9.36□□□□□ -0.91
NCOA1-208ENST00000483904 PPP1R15BQ5SWA1 713 aa9.35□□□□□ -0.91
NCOA1-208ENST00000483904 IL27Q8NEV9 243 aa9.34□□□□□ -0.91
NCOA1-208ENST00000483904 DSG2Q14126 1118 aa9.33□□□□□ -0.92
NCOA1-208ENST00000483904 RNF166Q96A37 237 aaPredicted RBP9.33□□□□□ -0.92
NCOA1-208ENST00000483904 GPIHBP1Q8IV16 184 aa9.32□□□□□ -0.92
NCOA1-208ENST00000483904 RIMBP2O15034 1052 aa9.31□□□□□ -0.92
NCOA1-208ENST00000483904 KRI1Q8N9T8 703 aaKnown RBP9.31□□□□□ -0.92
NCOA1-208ENST00000483904 EMILIN3Q9NT22 766 aa9.31□□□□□ -0.92
NCOA1-208ENST00000483904 TRIM66O15016 1216 aa9.29□□□□□ -0.92
NCOA1-208ENST00000483904 PDE4DQ08499 809 aa9.29□□□□□ -0.92
NCOA1-208ENST00000483904 KIF3CO14782 793 aa9.28□□□□□ -0.92
NCOA1-208ENST00000483904 FOXK1P85037 733 aa9.28□□□□□ -0.92
NCOA1-208ENST00000483904 VARS2Q5ST30 1063 aaKnown RBP9.28□□□□□ -0.92
NCOA1-208ENST00000483904 TMC2Q8TDI7 906 aa9.28□□□□□ -0.92
NCOA1-208ENST00000483904 C1orf115Q9H7X2 142 aa9.28□□□□□ -0.92
NCOA1-208ENST00000483904 MYT1LQ9UL68 1186 aa9.28□□□□□ -0.92
NCOA1-208ENST00000483904 C2orf72A6NCS6 295 aa9.27□□□□□ -0.93
NCOA1-208ENST00000483904 FLIIQ13045 1269 aa9.27□□□□□ -0.93
NCOA1-208ENST00000483904 DPYSL4O14531 572 aa9.26□□□□□ -0.93
NCOA1-208ENST00000483904 ARID3AQ99856 593 aa9.26□□□□□ -0.93
NCOA1-208ENST00000483904 ZSWIM6Q9HCJ5 1215 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms