RNA–Protein interactions for RNA: ENST00000483904.5

NCOA1-208, Transcript of nuclear receptor coactivator 1, humanhuman

TSL 3

Gene NCOA1, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA1-208ENST00000483904 AEBP2Q6ZN18 517 aaPredicted RBP21.43■■□□□ 1.02
NCOA1-208ENST00000483904 CHIC1Q5VXU3 224 aa20.06■□□□□ 0.8
NCOA1-208ENST00000483904 SENP3Q9H4L4 574 aaPredicted RBP18.39■□□□□ 0.53
NCOA1-208ENST00000483904 PHF23Q9BUL5 403 aaPredicted RBP18.08■□□□□ 0.48
NCOA1-208ENST00000483904 FOXD1Q16676 465 aa17.16■□□□□ 0.34
NCOA1-208ENST00000483904 POTEDQ86YR6 584 aa16.47■□□□□ 0.23
NCOA1-208ENST00000483904 MSH5O43196 834 aa16.23■□□□□ 0.19
NCOA1-208ENST00000483904 PIAS4Q8N2W9 510 aaPredicted RBP15.93■□□□□ 0.14
NCOA1-208ENST00000483904 PLPPR3Q6T4P5 718 aa15.82■□□□□ 0.12
NCOA1-208ENST00000483904 PPP6R1Q9UPN7 881 aa15.73■□□□□ 0.11
NCOA1-208ENST00000483904 ADRA2BP18089 450 aa15.66■□□□□ 0.1
NCOA1-208ENST00000483904 DMRT2Q9Y5R5 561 aa14.51□□□□□ -0.09
NCOA1-208ENST00000483904 MAPK8IP2Q13387 824 aaPredicted RBP14.5□□□□□ -0.09
NCOA1-208ENST00000483904 SCAF1Q9H7N4 1312 aaKnown RBP14.4□□□□□ -0.1
NCOA1-208ENST00000483904 CACNB1Q02641 598 aaPredicted RBP14.15□□□□□ -0.14
NCOA1-208ENST00000483904 DCAF8L1A6NGE4 600 aa13.9□□□□□ -0.18
NCOA1-208ENST00000483904 KCNA4P22459 653 aa13.87□□□□□ -0.19
NCOA1-208ENST00000483904 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
NCOA1-208ENST00000483904 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
NCOA1-208ENST00000483904 RNF39Q9H2S5 420 aa13.8□□□□□ -0.2
NCOA1-208ENST00000483904 CNKSR2Q8WXI2 1034 aa13.65□□□□□ -0.22
NCOA1-208ENST00000483904 RNF216Q9NWF9 866 aaPredicted RBP13.63□□□□□ -0.23
NCOA1-208ENST00000483904 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
NCOA1-208ENST00000483904 EHMT2Q96KQ7 1210 aa13.52□□□□□ -0.25
NCOA1-208ENST00000483904 DNAJC5BQ9UF47 199 aa13.49□□□□□ -0.25
NCOA1-208ENST00000483904 NCBP3Q53F19 620 aaKnown RBP13.39□□□□□ -0.27
NCOA1-208ENST00000483904 NPM3O75607 178 aaKnown RBP13.28□□□□□ -0.28
NCOA1-208ENST00000483904 SLC4A1APQ9BWU0 796 aaKnown RBP13.22□□□□□ -0.29
NCOA1-208ENST00000483904 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
NCOA1-208ENST00000483904 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
NCOA1-208ENST00000483904 POTEHQ6S545 545 aa12.83□□□□□ -0.36
NCOA1-208ENST00000483904 U3KPZ7 1027 aaPredicted RBP12.83□□□□□ -0.36
NCOA1-208ENST00000483904 ZBTB22O15209 634 aa12.82□□□□□ -0.36
NCOA1-208ENST00000483904 DSG3P32926 999 aa12.79□□□□□ -0.36
NCOA1-208ENST00000483904 CAPN15O75808 1086 aa12.76□□□□□ -0.37
NCOA1-208ENST00000483904 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
NCOA1-208ENST00000483904 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
NCOA1-208ENST00000483904 FOXD4L1Q9NU39 408 aa12.59□□□□□ -0.39
NCOA1-208ENST00000483904 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
NCOA1-208ENST00000483904 APLP2Q06481 763 aa12.49□□□□□ -0.41
NCOA1-208ENST00000483904 TRHP20396 242 aaPredicted RBP12.46□□□□□ -0.41
NCOA1-208ENST00000483904 ZNF219Q9P2Y4 722 aaPredicted RBP12.44□□□□□ -0.42
NCOA1-208ENST00000483904 ABCB7O75027 752 aa12.4□□□□□ -0.42
NCOA1-208ENST00000483904 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
NCOA1-208ENST00000483904 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
NCOA1-208ENST00000483904 AMER1Q5JTC6 1135 aaPredicted RBP12.34□□□□□ -0.43
NCOA1-208ENST00000483904 SAMD1Q6SPF0 538 aaPredicted RBP12.29□□□□□ -0.44
NCOA1-208ENST00000483904 RTN4Q9NQC3 1192 aaKnown RBP12.25□□□□□ -0.45
NCOA1-208ENST00000483904 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
NCOA1-208ENST00000483904 MYCNP04198 464 aaPredicted RBP12.21□□□□□ -0.45
NCOA1-208ENST00000483904 ATXN8OSP0DMR3 200 aa12.1□□□□□ -0.47
NCOA1-208ENST00000483904 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
NCOA1-208ENST00000483904 POLA2Q14181 598 aa12.05□□□□□ -0.48
NCOA1-208ENST00000483904 ATF5Q9Y2D1 282 aaPredicted RBP11.97□□□□□ -0.49
NCOA1-208ENST00000483904 AKT1S1Q96B36 256 aa11.88□□□□□ -0.51
NCOA1-208ENST00000483904 SP7Q8TDD2 431 aaPredicted RBP11.85□□□□□ -0.51
NCOA1-208ENST00000483904 ZBTB12Q9Y330 459 aaPredicted RBP11.81□□□□□ -0.52
NCOA1-208ENST00000483904 REM2Q8IYK8 340 aaPredicted RBP11.75□□□□□ -0.53
NCOA1-208ENST00000483904 PIP4P2Q8N4L2 257 aa11.72□□□□□ -0.53
NCOA1-208ENST00000483904 FKBP8Q14318 412 aa11.7□□□□□ -0.54
NCOA1-208ENST00000483904 OSCARQ8IYS5 282 aa11.65□□□□□ -0.54
NCOA1-208ENST00000483904 HAX1O00165 279 aa11.63□□□□□ -0.55
NCOA1-208ENST00000483904 FXR2P51116 673 aaKnown RBP eCLIP11.61□□□□□ -0.55
NCOA1-208ENST00000483904 PITPNM1O00562 1244 aa11.6□□□□□ -0.55
NCOA1-208ENST00000483904 MKRN4PQ13434 485 aaPredicted RBP11.45□□□□□ -0.58
NCOA1-208ENST00000483904 EVX2Q03828 476 aa11.43□□□□□ -0.58
NCOA1-208ENST00000483904 SPDYE2BA6NHP3 402 aa11.41□□□□□ -0.58
NCOA1-208ENST00000483904 SPDYE6P0CI01 402 aa11.41□□□□□ -0.58
NCOA1-208ENST00000483904 SPDYE2Q495Y8 402 aa11.41□□□□□ -0.58
NCOA1-208ENST00000483904 FBLN2P98095 1184 aa11.34□□□□□ -0.59
NCOA1-208ENST00000483904 SPDYE4A6NLX3 237 aa11.31□□□□□ -0.6
NCOA1-208ENST00000483904 PRKAR2AP13861 404 aaKnown RBP11.31□□□□□ -0.6
NCOA1-208ENST00000483904 PLCB2Q00722 1185 aa11.3□□□□□ -0.6
NCOA1-208ENST00000483904 SPDYE1Q8NFV5 336 aaPredicted RBP11.3□□□□□ -0.6
NCOA1-208ENST00000483904 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
NCOA1-208ENST00000483904 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
NCOA1-208ENST00000483904 PROM2Q8N271 834 aa11.22□□□□□ -0.61
NCOA1-208ENST00000483904 ZNF692Q9BU19 519 aaPredicted RBP11.19□□□□□ -0.62
NCOA1-208ENST00000483904 SSUH2Q9Y2M2 353 aa11.19□□□□□ -0.62
NCOA1-208ENST00000483904 GABBR2O75899 941 aa11.17□□□□□ -0.62
NCOA1-208ENST00000483904 BCANQ96GW7 911 aa11.17□□□□□ -0.62
NCOA1-208ENST00000483904 LHX8Q68G74 356 aa11.12□□□□□ -0.63
NCOA1-208ENST00000483904 FBXO3Q9UK99 471 aa11.11□□□□□ -0.63
NCOA1-208ENST00000483904 HAP1P54257 671 aaPredicted RBP11.08□□□□□ -0.64
NCOA1-208ENST00000483904 CHADLQ6NUI6 762 aa11.07□□□□□ -0.64
NCOA1-208ENST00000483904 PRR29P0C7W0 189 aa11.05□□□□□ -0.64
NCOA1-208ENST00000483904 VSIG10Q8N0Z9 540 aa11.03□□□□□ -0.64
NCOA1-208ENST00000483904 TAOK2Q9UL54 1235 aa11.03□□□□□ -0.64
NCOA1-208ENST00000483904 VASPP50552 380 aaPredicted RBP11.01□□□□□ -0.65
NCOA1-208ENST00000483904 PABPN1Q86U42 306 aaKnown RBP eCLIP11□□□□□ -0.65
NCOA1-208ENST00000483904 PRKCSHP14314 528 aaPredicted RBP10.97□□□□□ -0.65
NCOA1-208ENST00000483904 CLCN6P51797 869 aa10.94□□□□□ -0.66
NCOA1-208ENST00000483904 IFNLR1Q8IU57 520 aaPredicted RBP10.94□□□□□ -0.66
NCOA1-208ENST00000483904 CD44P16070 742 aaKnown RBP10.93□□□□□ -0.66
NCOA1-208ENST00000483904 POTEIP0CG38 1075 aa10.92□□□□□ -0.66
NCOA1-208ENST00000483904 FARP1Q9Y4F1 1045 aaPredicted RBP10.91□□□□□ -0.66
NCOA1-208ENST00000483904 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
NCOA1-208ENST00000483904 TPRNQ4KMQ1 711 aa10.81□□□□□ -0.68
NCOA1-208ENST00000483904 DCBLD2Q96PD2 775 aa10.79□□□□□ -0.68
NCOA1-208ENST00000483904 PKD2Q13563 968 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms