RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 CAMSAP2Q08AD1 1489 aa15.2■□□□□ 0.02
HDAC6-226ENST00000483656 PREX2Q70Z35 1606 aa15.2■□□□□ 0.02
HDAC6-226ENST00000483656 CDC42BPBQ9Y5S2 1711 aa15.2■□□□□ 0.02
HDAC6-226ENST00000483656 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-226ENST00000483656 ABCC5O15440 1437 aa15.17■□□□□ 0.02
HDAC6-226ENST00000483656 PLCH2O75038 1416 aa15.17■□□□□ 0.02
HDAC6-226ENST00000483656 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
HDAC6-226ENST00000483656 DNMT1P26358 1616 aaKnown RBP15.16■□□□□ 0.02
HDAC6-226ENST00000483656 DAPK1P53355 1430 aa15.16■□□□□ 0.02
HDAC6-226ENST00000483656 MYO5CQ9NQX4 1742 aa15.15■□□□□ 0.02
HDAC6-226ENST00000483656 ABCA9Q8IUA7 1624 aa15.15■□□□□ 0.02
HDAC6-226ENST00000483656 SAMD9LQ8IVG5 1584 aa15.15■□□□□ 0.02
HDAC6-226ENST00000483656 MAPKBP1O60336 1514 aa15.14■□□□□ 0.01
HDAC6-226ENST00000483656 SETD5Q9C0A6 1442 aa15.14■□□□□ 0.01
HDAC6-226ENST00000483656 ARHGAP5Q13017 1502 aa15.13■□□□□ 0.01
HDAC6-226ENST00000483656 MBD5Q9P267 1494 aa15.13■□□□□ 0.01
HDAC6-226ENST00000483656 RAB3GAP2Q9H2M9 1393 aa15.12■□□□□ 0.01
HDAC6-226ENST00000483656 HRCP23327 699 aa15.12■□□□□ 0.01
HDAC6-226ENST00000483656 CHIC2Q9UKJ5 165 aa15.12■□□□□ 0.01
HDAC6-226ENST00000483656 ARAP3Q8WWN8 1544 aa15.12■□□□□ 0.01
HDAC6-226ENST00000483656 HFM1A2PYH4 1435 aa15.11■□□□□ 0.01
HDAC6-226ENST00000483656 AKNAQ7Z591 1439 aa15.11■□□□□ 0.01
HDAC6-226ENST00000483656 NAIPQ13075 1403 aa15.1■□□□□ 0.01
HDAC6-226ENST00000483656 HNRNPMP52272 730 aaKnown RBP eCLIP15.1■□□□□ 0.01
HDAC6-226ENST00000483656 EFCAB2Q5VUJ9 269 aa15.1■□□□□ 0.01
HDAC6-226ENST00000483656 ARHGEF5Q12774 1597 aa15.1■□□□□ 0.01
HDAC6-226ENST00000483656 ROCK1Q13464 1354 aa15.09■□□□□ 0.01
HDAC6-226ENST00000483656 KIAA1107Q9UPP5 1409 aa15.09■□□□□ 0.01
HDAC6-226ENST00000483656 ARHGEF12Q9NZN5 1544 aa15.08■□□□□ 0.01
HDAC6-226ENST00000483656 RRP7BPQ9NSQ0 103 aa15.08■□□□□ 0
HDAC6-226ENST00000483656 CROCC2H7BZ55 1655 aa15.07■□□□□ 0
HDAC6-226ENST00000483656 CCER1Q8TC90 406 aaPredicted RBP15.07■□□□□ 0
HDAC6-226ENST00000483656 PLEKHH2Q8IVE3 1493 aa15.07■□□□□ 0
HDAC6-226ENST00000483656 SYCP2Q9BX26 1530 aa15.07■□□□□ 0
HDAC6-226ENST00000483656 ADGRL2O95490 1459 aa15.06■□□□□ 0
HDAC6-226ENST00000483656 DHX57Q6P158 1386 aaKnown RBP15.05■□□□□ -0
HDAC6-226ENST00000483656 CD109Q6YHK3 1445 aa15.05■□□□□ -0
HDAC6-226ENST00000483656 CCDC141Q6ZP82 1450 aa15.05■□□□□ -0
HDAC6-226ENST00000483656 SHANK2Q9UPX8 1470 aa15.05■□□□□ -0
HDAC6-226ENST00000483656 ABCC1P33527 1531 aa15.05■□□□□ -0
HDAC6-226ENST00000483656 GCC2Q8IWJ2 1684 aa15.04■□□□□ -0
HDAC6-226ENST00000483656 GLI2P10070 1586 aa15.04■□□□□ -0
HDAC6-226ENST00000483656 FANCAO15360 1455 aa15.04■□□□□ -0
HDAC6-226ENST00000483656 NCOA1Q15788 1441 aa15.04■□□□□ -0
HDAC6-226ENST00000483656 RSPH4AQ5TD94 716 aa15.04■□□□□ -0
HDAC6-226ENST00000483656 C9orf84Q5VXU9 1444 aa15.03■□□□□ -0
HDAC6-226ENST00000483656 KDM6BO15054 1643 aa15.03■□□□□ -0
HDAC6-226ENST00000483656 TRAPPC8Q9Y2L5 1435 aa15.02■□□□□ -0
HDAC6-226ENST00000483656 ADGBQ8N7X0 1667 aa15.02□□□□□ -0.01
HDAC6-226ENST00000483656 DIP2BQ9P265 1576 aa15.01□□□□□ -0.01
HDAC6-226ENST00000483656 MAP3K4Q9Y6R4 1608 aa15□□□□□ -0.01
HDAC6-226ENST00000483656 MAST1Q9Y2H9 1570 aa15□□□□□ -0.01
HDAC6-226ENST00000483656 TSPY4P0CV99 314 aa15□□□□□ -0.01
HDAC6-226ENST00000483656 TSPY10P0CW01 314 aa15□□□□□ -0.01
HDAC6-226ENST00000483656 ANKRD30AQ9BXX3 1397 aa14.99□□□□□ -0.01
HDAC6-226ENST00000483656 ADGRL1O94910 1474 aa14.97□□□□□ -0.01
HDAC6-226ENST00000483656 ZEB1P37275 1124 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-226ENST00000483656 FAM69CQ0P6D2 419 aa14.97□□□□□ -0.01
HDAC6-226ENST00000483656 SCAPERQ9BY12 1400 aa14.97□□□□□ -0.01
HDAC6-226ENST00000483656 AFAP1Q8N556 730 aa14.96□□□□□ -0.01
HDAC6-226ENST00000483656 NEO1Q92859 1461 aa14.95□□□□□ -0.02
HDAC6-226ENST00000483656 CFAP74Q9C0B2 1584 aa14.94□□□□□ -0.02
HDAC6-226ENST00000483656 KIF15Q9NS87 1388 aa14.94□□□□□ -0.02
HDAC6-226ENST00000483656 CLSPNQ9HAW4 1339 aa14.92□□□□□ -0.02
HDAC6-226ENST00000483656 ANKRD50Q9ULJ7 1429 aa14.92□□□□□ -0.02
HDAC6-226ENST00000483656 PLXNC1O60486 1568 aa14.92□□□□□ -0.02
HDAC6-226ENST00000483656 RTEL1-TNFRSF6BF6WH68 1400 aa14.92□□□□□ -0.02
HDAC6-226ENST00000483656 SPAG9O60271 1321 aaKnown RBP14.92□□□□□ -0.02
HDAC6-226ENST00000483656 PPRC1Q5VV67 1664 aaKnown RBP14.91□□□□□ -0.02
HDAC6-226ENST00000483656 KIF13AQ9H1H9 1805 aa14.91□□□□□ -0.02
HDAC6-226ENST00000483656 DENND4BO75064 1496 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-226ENST00000483656 ZFYVE16Q7Z3T8 1539 aa14.9□□□□□ -0.02
HDAC6-226ENST00000483656 POGZQ7Z3K3 1410 aa14.89□□□□□ -0.03
HDAC6-226ENST00000483656 INO80Q9ULG1 1556 aaPredicted RBP14.89□□□□□ -0.03
HDAC6-226ENST00000483656 TRIM52Q96A61 297 aa14.88□□□□□ -0.03
HDAC6-226ENST00000483656 ACIN1Q9UKV3 1341 aaKnown RBP14.88□□□□□ -0.03
HDAC6-226ENST00000483656 KDM5CP41229 1560 aa14.87□□□□□ -0.03
HDAC6-226ENST00000483656 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
HDAC6-226ENST00000483656 ATP7AQ04656 1500 aa14.87□□□□□ -0.03
HDAC6-226ENST00000483656 DUOX2Q9NRD8 1548 aa14.87□□□□□ -0.03
HDAC6-226ENST00000483656 MPHOSPH9Q99550 1183 aa14.86□□□□□ -0.03
HDAC6-226ENST00000483656 TSPOAP1O95153 1857 aa14.85□□□□□ -0.03
HDAC6-226ENST00000483656 PZPP20742 1482 aa14.85□□□□□ -0.03
HDAC6-226ENST00000483656 KIDINS220Q9ULH0 1771 aa14.85□□□□□ -0.03
HDAC6-226ENST00000483656 MLH3Q9UHC1 1453 aa14.84□□□□□ -0.03
HDAC6-226ENST00000483656 RAPGEF3O95398 923 aa14.84□□□□□ -0.03
HDAC6-226ENST00000483656 TEX14Q8IWB6 1497 aa14.83□□□□□ -0.03
HDAC6-226ENST00000483656 ERBINQ96RT1 1412 aa14.83□□□□□ -0.04
HDAC6-226ENST00000483656 KDM5DQ9BY66 1539 aa14.82□□□□□ -0.04
HDAC6-226ENST00000483656 RICTORQ6R327 1708 aa14.82□□□□□ -0.04
HDAC6-226ENST00000483656 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
HDAC6-226ENST00000483656 SIN3AQ96ST3 1273 aa14.81□□□□□ -0.04
HDAC6-226ENST00000483656 NUP155O75694 1391 aa14.8□□□□□ -0.04
HDAC6-226ENST00000483656 DHX29Q7Z478 1369 aaKnown RBP14.8□□□□□ -0.04
HDAC6-226ENST00000483656 UNC13BO14795 1591 aa14.8□□□□□ -0.04
HDAC6-226ENST00000483656 HECW2Q9P2P5 1572 aa14.8□□□□□ -0.04
HDAC6-226ENST00000483656 SLC4A1APQ9BWU0 796 aaKnown RBP14.79□□□□□ -0.04
HDAC6-226ENST00000483656 COL17A1Q9UMD9 1497 aaPredicted RBP14.78□□□□□ -0.04
HDAC6-226ENST00000483656 FOXD1Q16676 465 aa14.78□□□□□ -0.04
HDAC6-226ENST00000483656 MYT1LQ9UL68 1186 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms