RNA–Protein interactions for RNA: ENST00000483561.2

DENND4B-209, Transcript of DENN domain containing 4B, humanhuman

TSL 4

Gene DENND4B, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-209ENST00000483561 ARHGAP5Q13017 1502 aa37.15■■■■□ 3.54
DENND4B-209ENST00000483561 ARHGEF40Q8TER5 1519 aa37.15■■■■□ 3.54
DENND4B-209ENST00000483561 ZMYM4Q5VZL5 1548 aa37.12■■■■□ 3.53
DENND4B-209ENST00000483561 PREX2Q70Z35 1606 aa37.1■■■■□ 3.53
DENND4B-209ENST00000483561 POGZQ7Z3K3 1410 aa37.1■■■■□ 3.53
DENND4B-209ENST00000483561 CDC42BPAQ5VT25 1732 aa37.08■■■■□ 3.53
DENND4B-209ENST00000483561 ZFYVE16Q7Z3T8 1539 aa37.05■■■■□ 3.52
DENND4B-209ENST00000483561 YEATS2Q9ULM3 1422 aa37.05■■■■□ 3.52
DENND4B-209ENST00000483561 ADAMTSL3P82987 1691 aa37.03■■■■□ 3.52
DENND4B-209ENST00000483561 BCORL1Q5H9F3 1711 aa37.02■■■■□ 3.52
DENND4B-209ENST00000483561 ARID4BQ4LE39 1312 aaPredicted RBP37.02■■■■□ 3.52
DENND4B-209ENST00000483561 SIGLEC1Q9BZZ2 1709 aa37.01■■■■□ 3.51
DENND4B-209ENST00000483561 MAGI2Q86UL8 1455 aa36.98■■■■□ 3.51
DENND4B-209ENST00000483561 AFAP1Q8N556 730 aa36.93■■■■□ 3.5
DENND4B-209ENST00000483561 ITSN2Q9NZM3 1697 aa36.93■■■■□ 3.5
DENND4B-209ENST00000483561 MTUS2Q5JR59 1369 aa36.92■■■■□ 3.5
DENND4B-209ENST00000483561 ABCC1P33527 1531 aa36.92■■■■□ 3.5
DENND4B-209ENST00000483561 ZNF518AQ6AHZ1 1483 aa36.92■■■■□ 3.5
DENND4B-209ENST00000483561 MADDQ8WXG6 1647 aa36.92■■■■□ 3.5
DENND4B-209ENST00000483561 ARHGEF12Q9NZN5 1544 aa36.91■■■■□ 3.5
DENND4B-209ENST00000483561 KDM5CP41229 1560 aa36.9■■■■□ 3.5
DENND4B-209ENST00000483561 GPATCH8Q9UKJ3 1502 aaKnown RBP36.9■■■■□ 3.5
DENND4B-209ENST00000483561 SAMD9LQ8IVG5 1584 aa36.86■■■■□ 3.49
DENND4B-209ENST00000483561 TRAPPC8Q9Y2L5 1435 aa36.85■■■■□ 3.49
DENND4B-209ENST00000483561 ZNF777Q9ULD5 760 aaPredicted RBP36.85■■■■□ 3.49
DENND4B-209ENST00000483561 PTPRMP28827 1452 aa36.84■■■■□ 3.49
DENND4B-209ENST00000483561 EHBP1L1Q8N3D4 1523 aa36.84■■■■□ 3.49
DENND4B-209ENST00000483561 HECW2Q9P2P5 1572 aa36.83■■■■□ 3.49
DENND4B-209ENST00000483561 ATP10AO60312 1499 aa36.83■■■■□ 3.49
DENND4B-209ENST00000483561 RIMS1Q86UR5 1692 aaKnown RBP36.83■■■■□ 3.49
DENND4B-209ENST00000483561 CCNB3Q8WWL7 1395 aa36.8■■■■□ 3.48
DENND4B-209ENST00000483561 MYT1LQ9UL68 1186 aa36.8■■■■□ 3.48
DENND4B-209ENST00000483561 C9orf84Q5VXU9 1444 aa36.78■■■■□ 3.48
DENND4B-209ENST00000483561 VPS8Q8N3P4 1428 aa36.78■■■■□ 3.48
DENND4B-209ENST00000483561 TIAM1Q13009 1591 aa36.77■■■■□ 3.48
DENND4B-209ENST00000483561 DIP2CQ9Y2E4 1556 aa36.77■■■■□ 3.48
DENND4B-209ENST00000483561 SYCP2Q9BX26 1530 aa36.76■■■■□ 3.48
DENND4B-209ENST00000483561 MLECQ14165 292 aa36.76■■■■□ 3.48
DENND4B-209ENST00000483561 ABCA6Q8N139 1617 aa36.76■■■■□ 3.48
DENND4B-209ENST00000483561 CFDP1Q9UEE9 299 aaPredicted RBP36.74■■■■□ 3.47
DENND4B-209ENST00000483561 MLH3Q9UHC1 1453 aa36.74■■■■□ 3.47
DENND4B-209ENST00000483561 KIDINS220Q9ULH0 1771 aa36.72■■■■□ 3.47
DENND4B-209ENST00000483561 FER1L4A9Z1Z3 1794 aa36.71■■■■□ 3.47
DENND4B-209ENST00000483561 HNRNPMP52272 730 aaKnown RBP eCLIP36.7■■■■□ 3.47
DENND4B-209ENST00000483561 SUPT6HQ7KZ85 1726 aaKnown RBP36.68■■■■□ 3.46
DENND4B-209ENST00000483561 NCOA2Q15596 1464 aa36.63■■■■□ 3.45
DENND4B-209ENST00000483561 ZNF644Q9H582 1327 aaPredicted RBP36.62■■■■□ 3.45
DENND4B-209ENST00000483561 REREQ9P2R6 1566 aa36.62■■■■□ 3.45
DENND4B-209ENST00000483561 PLPPR3Q6T4P5 718 aa36.62■■■■□ 3.45
DENND4B-209ENST00000483561 PLEKHH2Q8IVE3 1493 aa36.62■■■■□ 3.45
DENND4B-209ENST00000483561 KIAA1107Q9UPP5 1409 aa36.61■■■■□ 3.45
DENND4B-209ENST00000483561 LRRC9Q6ZRR7 1453 aa36.56■■■■□ 3.44
DENND4B-209ENST00000483561 SPAG9O60271 1321 aaKnown RBP36.56■■■■□ 3.44
DENND4B-209ENST00000483561 ATP7AQ04656 1500 aa36.53■■■■□ 3.44
DENND4B-209ENST00000483561 INO80Q9ULG1 1556 aaPredicted RBP36.53■■■■□ 3.44
DENND4B-209ENST00000483561 KANK4Q5T7N3 995 aaPredicted RBP36.51■■■■□ 3.44
DENND4B-209ENST00000483561 AGLP35573 1532 aa36.5■■■■□ 3.43
DENND4B-209ENST00000483561 MAP3K1Q13233 1512 aa36.49■■■■□ 3.43
DENND4B-209ENST00000483561 MBD5Q9P267 1494 aa36.49■■■■□ 3.43
DENND4B-209ENST00000483561 CAMSAP2Q08AD1 1489 aa36.45■■■■□ 3.43
DENND4B-209ENST00000483561 LMTK3Q96Q04 1460 aa36.43■■■■□ 3.42
DENND4B-209ENST00000483561 CEBPAP49715 358 aaPredicted RBP36.41■■■■□ 3.42
DENND4B-209ENST00000483561 ADGBQ8N7X0 1667 aa36.36■■■■□ 3.41
DENND4B-209ENST00000483561 A2MP01023 1474 aa36.36■■■■□ 3.41
DENND4B-209ENST00000483561 PLXNC1O60486 1568 aa36.36■■■■□ 3.41
DENND4B-209ENST00000483561 C3P01024 1663 aa36.33■■■■□ 3.41
DENND4B-209ENST00000483561 CCDC141Q6ZP82 1450 aa36.33■■■■□ 3.41
DENND4B-209ENST00000483561 APLP2Q06481 763 aa36.29■■■■□ 3.4
DENND4B-209ENST00000483561 RTEL1-TNFRSF6BF6WH68 1400 aa36.28■■■■□ 3.4
DENND4B-209ENST00000483561 HSPA2P54652 639 aa36.28■■■■□ 3.4
DENND4B-209ENST00000483561 ARHGEF5Q12774 1597 aa36.27■■■■□ 3.4
DENND4B-209ENST00000483561 ESF1Q9H501 851 aaKnown RBP36.27■■■■□ 3.4
DENND4B-209ENST00000483561 PREX1Q8TCU6 1659 aa36.26■■■■□ 3.4
DENND4B-209ENST00000483561 MYOM3Q5VTT5 1437 aa36.25■■■■□ 3.39
DENND4B-209ENST00000483561 SETD1BQ9UPS6 1966 aaKnown RBP36.23■■■■□ 3.39
DENND4B-209ENST00000483561 CLTCQ00610 1675 aaKnown RBP36.21■■■■□ 3.39
DENND4B-209ENST00000483561 RSPH4AQ5TD94 716 aa36.21■■■■□ 3.39
DENND4B-209ENST00000483561 CNTLNQ9NXG0 1405 aa36.19■■■■□ 3.38
DENND4B-209ENST00000483561 MROH2AA6NES4 1674 aa36.19■■■■□ 3.38
DENND4B-209ENST00000483561 MIA2Q96PC5 1412 aa36.18■■■■□ 3.38
DENND4B-209ENST00000483561 GGT6Q6P531 493 aa36.18■■■■□ 3.38
DENND4B-209ENST00000483561 DHX29Q7Z478 1369 aaKnown RBP36.15■■■■□ 3.38
DENND4B-209ENST00000483561 TSPY4P0CV99 314 aa36.12■■■■□ 3.37
DENND4B-209ENST00000483561 TSPY10P0CW01 314 aa36.12■■■■□ 3.37
DENND4B-209ENST00000483561 MAST1Q9Y2H9 1570 aa36.1■■■■□ 3.37
DENND4B-209ENST00000483561 PTPN23Q9H3S7 1636 aa36.09■■■■□ 3.37
DENND4B-209ENST00000483561 ZMYM3Q14202 1370 aa36.09■■■■□ 3.37
DENND4B-209ENST00000483561 UHRF1BP1Q6BDS2 1440 aa36.08■■■■□ 3.37
DENND4B-209ENST00000483561 KIF3BO15066 747 aa36.05■■■■□ 3.36
DENND4B-209ENST00000483561 FGD6Q6ZV73 1430 aa36■■■■□ 3.35
DENND4B-209ENST00000483561 CROCC2H7BZ55 1655 aa36■■■■□ 3.35
DENND4B-209ENST00000483561 STRCQ7RTU9 1775 aa35.97■■■■□ 3.35
DENND4B-209ENST00000483561 PPP6R1Q9UPN7 881 aa35.97■■■■□ 3.35
DENND4B-209ENST00000483561 NPATQ14207 1427 aa35.97■■■■□ 3.35
DENND4B-209ENST00000483561 TCOF1Q13428 1488 aaKnown RBP35.95■■■■□ 3.35
DENND4B-209ENST00000483561 ABCC5O15440 1437 aa35.95■■■■□ 3.35
DENND4B-209ENST00000483561 PTPRKQ15262 1439 aa35.93■■■■□ 3.34
DENND4B-209ENST00000483561 DNMT1P26358 1616 aaKnown RBP35.92■■■■□ 3.34
DENND4B-209ENST00000483561 ILDR1Q86SU0 546 aaPredicted RBP35.91■■■■□ 3.34
DENND4B-209ENST00000483561 KDM5DQ9BY66 1539 aa35.89■■■■□ 3.34
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms