RNA–Protein interactions for RNA: ENST00000483558.5

PKD1-215, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 577 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-215ENST00000483558 NUP153P49790 1475 aaKnown RBP28.97■■■□□ 2.23
PKD1-215ENST00000483558 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
PKD1-215ENST00000483558 CFAP74Q9C0B2 1584 aa28.97■■■□□ 2.23
PKD1-215ENST00000483558 SETD1BQ9UPS6 1966 aaKnown RBP28.96■■■□□ 2.23
PKD1-215ENST00000483558 RANGAP1P46060 587 aaPredicted RBP28.96■■■□□ 2.23
PKD1-215ENST00000483558 MAGI2Q86UL8 1455 aa28.96■■■□□ 2.23
PKD1-215ENST00000483558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.95■■■□□ 2.23
PKD1-215ENST00000483558 UHRF1BP1Q6BDS2 1440 aa28.94■■■□□ 2.22
PKD1-215ENST00000483558 LTBP4Q8N2S1 1624 aa28.94■■■□□ 2.22
PKD1-215ENST00000483558 PTPRTO14522 1441 aa28.92■■■□□ 2.22
PKD1-215ENST00000483558 ATP10AO60312 1499 aa28.91■■■□□ 2.22
PKD1-215ENST00000483558 SCAPERQ9BY12 1400 aa28.91■■■□□ 2.22
PKD1-215ENST00000483558 SAMD9Q5K651 1589 aa28.9■■■□□ 2.22
PKD1-215ENST00000483558 C9orf84Q5VXU9 1444 aa28.86■■■□□ 2.21
PKD1-215ENST00000483558 UBAP1LF5GYI3 381 aa28.83■■■□□ 2.21
PKD1-215ENST00000483558 IQSEC2Q5JU85 1478 aa28.78■■■□□ 2.2
PKD1-215ENST00000483558 MYT1LQ9UL68 1186 aa28.77■■■□□ 2.2
PKD1-215ENST00000483558 C3P01024 1663 aa28.75■■■□□ 2.19
PKD1-215ENST00000483558 PLCH2O75038 1416 aa28.74■■■□□ 2.19
PKD1-215ENST00000483558 AFAP1Q8N556 730 aa28.71■■■□□ 2.19
PKD1-215ENST00000483558 ZNF335Q9H4Z2 1342 aaPredicted RBP28.7■■■□□ 2.19
PKD1-215ENST00000483558 NCOA1Q15788 1441 aa28.69■■■□□ 2.18
PKD1-215ENST00000483558 EFCAB2Q5VUJ9 269 aa28.68■■■□□ 2.18
PKD1-215ENST00000483558 NCKAP5LQ9HCH0 1330 aa28.68■■■□□ 2.18
PKD1-215ENST00000483558 ESF1Q9H501 851 aaKnown RBP28.67■■■□□ 2.18
PKD1-215ENST00000483558 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
PKD1-215ENST00000483558 TRAPPC8Q9Y2L5 1435 aa28.65■■■□□ 2.18
PKD1-215ENST00000483558 HSPA1LP34931 641 aa28.61■■■□□ 2.17
PKD1-215ENST00000483558 CAMSAP1Q5T5Y3 1602 aa28.61■■■□□ 2.17
PKD1-215ENST00000483558 SCAF1Q9H7N4 1312 aaKnown RBP28.6■■■□□ 2.17
PKD1-215ENST00000483558 MED1Q15648 1581 aaPredicted RBP28.58■■■□□ 2.17
PKD1-215ENST00000483558 MYO5CQ9NQX4 1742 aa28.58■■■□□ 2.17
PKD1-215ENST00000483558 CSRNP3Q8WYN3 585 aa28.58■■■□□ 2.17
PKD1-215ENST00000483558 DIP2CQ9Y2E4 1556 aa28.58■■■□□ 2.17
PKD1-215ENST00000483558 ATP1B4Q9UN42 357 aaPredicted RBP28.57■■■□□ 2.16
PKD1-215ENST00000483558 ZNF518AQ6AHZ1 1483 aa28.56■■■□□ 2.16
PKD1-215ENST00000483558 PIP4K2BP78356 416 aa28.55■■■□□ 2.16
PKD1-215ENST00000483558 ABCA6Q8N139 1617 aa28.51■■■□□ 2.15
PKD1-215ENST00000483558 KDM5CP41229 1560 aa28.51■■■□□ 2.15
PKD1-215ENST00000483558 PHF23Q9BUL5 403 aaPredicted RBP28.47■■■□□ 2.15
PKD1-215ENST00000483558 ARHGAP5Q13017 1502 aa28.47■■■□□ 2.15
PKD1-215ENST00000483558 KIF14Q15058 1648 aa28.46■■■□□ 2.15
PKD1-215ENST00000483558 REREQ9P2R6 1566 aa28.45■■■□□ 2.15
PKD1-215ENST00000483558 AGLP35573 1532 aa28.43■■■□□ 2.14
PKD1-215ENST00000483558 PKD2Q13563 968 aa28.4■■■□□ 2.14
PKD1-215ENST00000483558 CNTLNQ9NXG0 1405 aa28.4■■■□□ 2.14
PKD1-215ENST00000483558 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
PKD1-215ENST00000483558 MLH3Q9UHC1 1453 aa28.4■■■□□ 2.14
PKD1-215ENST00000483558 ZMYM3Q14202 1370 aa28.39■■■□□ 2.14
PKD1-215ENST00000483558 NPATQ14207 1427 aa28.36■■■□□ 2.13
PKD1-215ENST00000483558 SENP3Q9H4L4 574 aaPredicted RBP28.36■■■□□ 2.13
PKD1-215ENST00000483558 PPP6R1Q9UPN7 881 aa28.36■■■□□ 2.13
PKD1-215ENST00000483558 TOM1O60784 492 aa28.35■■■□□ 2.13
PKD1-215ENST00000483558 CDK11AQ9UQ88 783 aaPredicted RBP28.35■■■□□ 2.13
PKD1-215ENST00000483558 CDC42BPBQ9Y5S2 1711 aa28.33■■■□□ 2.13
PKD1-215ENST00000483558 KIDINS220Q9ULH0 1771 aa28.31■■■□□ 2.12
PKD1-215ENST00000483558 MROH2AA6NES4 1674 aa28.29■■■□□ 2.12
PKD1-215ENST00000483558 TCOF1Q13428 1488 aaKnown RBP28.29■■■□□ 2.12
PKD1-215ENST00000483558 PLA2R1Q13018 1463 aa28.28■■■□□ 2.12
PKD1-215ENST00000483558 MYO3AQ8NEV4 1616 aa28.28■■■□□ 2.12
PKD1-215ENST00000483558 TROQ12816 1431 aaPredicted RBP28.26■■■□□ 2.12
PKD1-215ENST00000483558 CLTCQ00610 1675 aaKnown RBP28.26■■■□□ 2.12
PKD1-215ENST00000483558 CEP170BQ9Y4F5 1589 aaPredicted RBP28.25■■■□□ 2.11
PKD1-215ENST00000483558 ZNF142P52746 1687 aaPredicted RBP28.25■■■□□ 2.11
PKD1-215ENST00000483558 ITSN2Q9NZM3 1697 aa28.25■■■□□ 2.11
PKD1-215ENST00000483558 EHMT2Q96KQ7 1210 aa28.23■■■□□ 2.11
PKD1-215ENST00000483558 ABCC1P33527 1531 aa28.22■■■□□ 2.11
PKD1-215ENST00000483558 PTPRKQ15262 1439 aa28.2■■■□□ 2.11
PKD1-215ENST00000483558 CLIP1P30622 1438 aa28.19■■■□□ 2.1
PKD1-215ENST00000483558 GGT6Q6P531 493 aa28.17■■■□□ 2.1
PKD1-215ENST00000483558 ZNF777Q9ULD5 760 aaPredicted RBP28.16■■■□□ 2.1
PKD1-215ENST00000483558 SHANK2Q9UPX8 1470 aa28.15■■■□□ 2.1
PKD1-215ENST00000483558 RGS17Q9UGC6 210 aaPredicted RBP28.15■■■□□ 2.1
PKD1-215ENST00000483558 LRRIQ1Q96JM4 1722 aa28.15■■■□□ 2.1
PKD1-215ENST00000483558 CPS1P31327 1500 aa28.14■■■□□ 2.1
PKD1-215ENST00000483558 FMN1Q68DA7 1419 aa28.14■■■□□ 2.1
PKD1-215ENST00000483558 PREX2Q70Z35 1606 aa28.14■■■□□ 2.09
PKD1-215ENST00000483558 ALKQ9UM73 1620 aa28.11■■■□□ 2.09
PKD1-215ENST00000483558 SAMD9LQ8IVG5 1584 aa28.11■■■□□ 2.09
PKD1-215ENST00000483558 DNMT1P26358 1616 aaKnown RBP28.1■■■□□ 2.09
PKD1-215ENST00000483558 SPAG9O60271 1321 aaKnown RBP28.1■■■□□ 2.09
PKD1-215ENST00000483558 HNRNPMP52272 730 aaKnown RBP eCLIP28.09■■■□□ 2.09
PKD1-215ENST00000483558 A2ML1A8K2U0 1454 aa28.07■■■□□ 2.08
PKD1-215ENST00000483558 POLR1AO95602 1720 aaPredicted RBP28.06■■■□□ 2.08
PKD1-215ENST00000483558 NEURL4Q96JN8 1562 aa28.05■■■□□ 2.08
PKD1-215ENST00000483558 CDC42BPAQ5VT25 1732 aa28.04■■■□□ 2.08
PKD1-215ENST00000483558 UBTFP17480 764 aaKnown RBP28.04■■■□□ 2.08
PKD1-215ENST00000483558 ARHGAP35Q9NRY4 1499 aa28.03■■■□□ 2.08
PKD1-215ENST00000483558 EEA1Q15075 1411 aa28.03■■■□□ 2.08
PKD1-215ENST00000483558 VWDEQ8N2E2 1590 aa28■■■□□ 2.07
PKD1-215ENST00000483558 FBXO31Q5XUX0 539 aaPredicted RBP28■■■□□ 2.07
PKD1-215ENST00000483558 A2MP01023 1474 aa27.99■■■□□ 2.07
PKD1-215ENST00000483558 SYCP2Q9BX26 1530 aa27.98■■■□□ 2.07
PKD1-215ENST00000483558 ANKLE2Q86XL3 938 aa27.97■■■□□ 2.07
PKD1-215ENST00000483558 ATP7AQ04656 1500 aa27.96■■■□□ 2.07
PKD1-215ENST00000483558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.96■■■□□ 2.07
PKD1-215ENST00000483558 POTEAQ6S8J7 498 aa27.95■■■□□ 2.06
PKD1-215ENST00000483558 PLXNC1O60486 1568 aa27.94■■■□□ 2.06
PKD1-215ENST00000483558 STRCP1A6NGW2 1772 aa27.91■■■□□ 2.06
PKD1-215ENST00000483558 TNRQ92752 1358 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms