RNA–Protein interactions for RNA: ENST00000482541.2

CCNC-204, Transcript of cyclin C, humanhuman

TSL 1 (best) BASIC

Gene CCNC, Length 1,704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-204ENST00000482541 RAPGEF3O95398 923 aa12.62□□□□□ -0.39
CCNC-204ENST00000482541 FANCAO15360 1455 aa12.59□□□□□ -0.39
CCNC-204ENST00000482541 AKNAQ7Z591 1439 aa12.59□□□□□ -0.39
CCNC-204ENST00000482541 PLCH2O75038 1416 aa12.58□□□□□ -0.4
CCNC-204ENST00000482541 CFAP74Q9C0B2 1584 aa12.58□□□□□ -0.4
CCNC-204ENST00000482541 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
CCNC-204ENST00000482541 MYCNP04198 464 aaPredicted RBP12.57□□□□□ -0.4
CCNC-204ENST00000482541 TTC37Q6PGP7 1564 aa12.57□□□□□ -0.4
CCNC-204ENST00000482541 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
CCNC-204ENST00000482541 CASKIN1Q8WXD9 1431 aa12.56□□□□□ -0.4
CCNC-204ENST00000482541 TROQ12816 1431 aaPredicted RBP12.55□□□□□ -0.4
CCNC-204ENST00000482541 FRMPD1Q5SYB0 1578 aa12.55□□□□□ -0.4
CCNC-204ENST00000482541 CLIP1P30622 1438 aa12.55□□□□□ -0.4
CCNC-204ENST00000482541 EFCAB2Q5VUJ9 269 aa12.54□□□□□ -0.4
CCNC-204ENST00000482541 CCDC18Q5T9S5 1454 aa12.54□□□□□ -0.4
CCNC-204ENST00000482541 RICTORQ6R327 1708 aa12.53□□□□□ -0.4
CCNC-204ENST00000482541 LRRIQ1Q96JM4 1722 aa12.53□□□□□ -0.4
CCNC-204ENST00000482541 KIF14Q15058 1648 aa12.52□□□□□ -0.41
CCNC-204ENST00000482541 MYO5CQ9NQX4 1742 aa12.52□□□□□ -0.41
CCNC-204ENST00000482541 SCAPERQ9BY12 1400 aa12.51□□□□□ -0.41
CCNC-204ENST00000482541 PCF11O94913 1555 aaKnown RBP12.51□□□□□ -0.41
CCNC-204ENST00000482541 MAGI2Q86UL8 1455 aa12.5□□□□□ -0.41
CCNC-204ENST00000482541 FYCO1Q9BQS8 1478 aa12.5□□□□□ -0.41
CCNC-204ENST00000482541 ARID4BQ4LE39 1312 aaPredicted RBP12.5□□□□□ -0.41
CCNC-204ENST00000482541 ZMYM4Q5VZL5 1548 aa12.5□□□□□ -0.41
CCNC-204ENST00000482541 ADAMTSL3P82987 1691 aa12.48□□□□□ -0.41
CCNC-204ENST00000482541 POGZQ7Z3K3 1410 aa12.47□□□□□ -0.41
CCNC-204ENST00000482541 ARHGEF40Q8TER5 1519 aa12.47□□□□□ -0.41
CCNC-204ENST00000482541 ARHGAP5Q13017 1502 aa12.46□□□□□ -0.41
CCNC-204ENST00000482541 BCORL1Q5H9F3 1711 aa12.46□□□□□ -0.41
CCNC-204ENST00000482541 ZFYVE16Q7Z3T8 1539 aa12.46□□□□□ -0.42
CCNC-204ENST00000482541 ATXN8OSP0DMR3 200 aa12.45□□□□□ -0.42
CCNC-204ENST00000482541 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
CCNC-204ENST00000482541 CDC42BPBQ9Y5S2 1711 aa12.45□□□□□ -0.42
CCNC-204ENST00000482541 PTPRMP28827 1452 aa12.44□□□□□ -0.42
CCNC-204ENST00000482541 ZNF518AQ6AHZ1 1483 aa12.44□□□□□ -0.42
CCNC-204ENST00000482541 AFAP1Q8N556 730 aa12.44□□□□□ -0.42
CCNC-204ENST00000482541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.43□□□□□ -0.42
CCNC-204ENST00000482541 ATP10AO60312 1499 aa12.43□□□□□ -0.42
CCNC-204ENST00000482541 PREX2Q70Z35 1606 aa12.42□□□□□ -0.42
CCNC-204ENST00000482541 HECW2Q9P2P5 1572 aa12.42□□□□□ -0.42
CCNC-204ENST00000482541 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
CCNC-204ENST00000482541 KDM5CP41229 1560 aa12.4□□□□□ -0.42
CCNC-204ENST00000482541 MADDQ8WXG6 1647 aa12.4□□□□□ -0.42
CCNC-204ENST00000482541 CDC42BPAQ5VT25 1732 aa12.4□□□□□ -0.43
CCNC-204ENST00000482541 MYT1LQ9UL68 1186 aa12.4□□□□□ -0.43
CCNC-204ENST00000482541 C9orf84Q5VXU9 1444 aa12.39□□□□□ -0.43
CCNC-204ENST00000482541 MTUS2Q5JR59 1369 aa12.39□□□□□ -0.43
CCNC-204ENST00000482541 MLH3Q9UHC1 1453 aa12.39□□□□□ -0.43
CCNC-204ENST00000482541 GPATCH8Q9UKJ3 1502 aaKnown RBP12.38□□□□□ -0.43
CCNC-204ENST00000482541 ABCC1P33527 1531 aa12.38□□□□□ -0.43
CCNC-204ENST00000482541 SIGLEC1Q9BZZ2 1709 aa12.37□□□□□ -0.43
CCNC-204ENST00000482541 LOC105371045A0A1W2PR82 267 aa12.37□□□□□ -0.43
CCNC-204ENST00000482541 ARHGEF12Q9NZN5 1544 aa12.37□□□□□ -0.43
CCNC-204ENST00000482541 TRAPPC8Q9Y2L5 1435 aa12.37□□□□□ -0.43
CCNC-204ENST00000482541 MLECQ14165 292 aa12.37□□□□□ -0.43
CCNC-204ENST00000482541 CFDP1Q9UEE9 299 aaPredicted RBP12.37□□□□□ -0.43
CCNC-204ENST00000482541 ZNF777Q9ULD5 760 aaPredicted RBP12.37□□□□□ -0.43
CCNC-204ENST00000482541 CCNB3Q8WWL7 1395 aa12.36□□□□□ -0.43
CCNC-204ENST00000482541 RIMS1Q86UR5 1692 aaKnown RBP12.36□□□□□ -0.43
CCNC-204ENST00000482541 ITSN2Q9NZM3 1697 aa12.35□□□□□ -0.43
CCNC-204ENST00000482541 KIAA1107Q9UPP5 1409 aa12.35□□□□□ -0.43
CCNC-204ENST00000482541 REREQ9P2R6 1566 aa12.34□□□□□ -0.43
CCNC-204ENST00000482541 PLEKHH2Q8IVE3 1493 aa12.34□□□□□ -0.43
CCNC-204ENST00000482541 HNRNPMP52272 730 aaKnown RBP eCLIP12.34□□□□□ -0.438e-10■■■■□ 20.8
CCNC-204ENST00000482541 SAMD9LQ8IVG5 1584 aa12.33□□□□□ -0.44
CCNC-204ENST00000482541 DIP2CQ9Y2E4 1556 aa12.33□□□□□ -0.44
CCNC-204ENST00000482541 EHBP1L1Q8N3D4 1523 aa12.32□□□□□ -0.44
CCNC-204ENST00000482541 FER1L4A9Z1Z3 1794 aa12.32□□□□□ -0.44
CCNC-204ENST00000482541 AGLP35573 1532 aa12.32□□□□□ -0.44
CCNC-204ENST00000482541 KIDINS220Q9ULH0 1771 aa12.31□□□□□ -0.44
CCNC-204ENST00000482541 ABCA6Q8N139 1617 aa12.31□□□□□ -0.44
CCNC-204ENST00000482541 SPAG9O60271 1321 aaKnown RBP12.3□□□□□ -0.44
CCNC-204ENST00000482541 SYCP2Q9BX26 1530 aa12.3□□□□□ -0.44
CCNC-204ENST00000482541 U3KPZ7 1027 aaPredicted RBP12.3□□□□□ -0.44
CCNC-204ENST00000482541 LMTK3Q96Q04 1460 aa12.3□□□□□ -0.44
CCNC-204ENST00000482541 VPS8Q8N3P4 1428 aa12.29□□□□□ -0.44
CCNC-204ENST00000482541 TIAM1Q13009 1591 aa12.28□□□□□ -0.44
CCNC-204ENST00000482541 ESF1Q9H501 851 aaKnown RBP12.28□□□□□ -0.44
CCNC-204ENST00000482541 RSPH4AQ5TD94 716 aa12.27□□□□□ -0.45
CCNC-204ENST00000482541 ZNF644Q9H582 1327 aaPredicted RBP12.27□□□□□ -0.45
CCNC-204ENST00000482541 SUPT6HQ7KZ85 1726 aaKnown RBP12.26□□□□□ -0.45
CCNC-204ENST00000482541 CEBPAP49715 358 aaPredicted RBP12.26□□□□□ -0.45
CCNC-204ENST00000482541 NCOA2Q15596 1464 aa12.26□□□□□ -0.45
CCNC-204ENST00000482541 MBD5Q9P267 1494 aa12.25□□□□□ -0.45
CCNC-204ENST00000482541 ATP7AQ04656 1500 aa12.25□□□□□ -0.45
CCNC-204ENST00000482541 MAP3K1Q13233 1512 aa12.25□□□□□ -0.45
CCNC-204ENST00000482541 SETD1BQ9UPS6 1966 aaKnown RBP12.24□□□□□ -0.45
CCNC-204ENST00000482541 ATF5Q9Y2D1 282 aaPredicted RBP12.24□□□□□ -0.45
CCNC-204ENST00000482541 INO80Q9ULG1 1556 aaPredicted RBP12.24□□□□□ -0.45
CCNC-204ENST00000482541 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
CCNC-204ENST00000482541 RTEL1-TNFRSF6BF6WH68 1400 aa12.23□□□□□ -0.45
CCNC-204ENST00000482541 CNTLNQ9NXG0 1405 aa12.23□□□□□ -0.45
CCNC-204ENST00000482541 HSPA2P54652 639 aa12.23□□□□□ -0.45
CCNC-204ENST00000482541 SAMD1Q6SPF0 538 aaPredicted RBP12.23□□□□□ -0.45
CCNC-204ENST00000482541 A2MP01023 1474 aa12.23□□□□□ -0.45
CCNC-204ENST00000482541 ILDR1Q86SU0 546 aaPredicted RBP12.22□□□□□ -0.45
CCNC-204ENST00000482541 PREX1Q8TCU6 1659 aa12.21□□□□□ -0.45
CCNC-204ENST00000482541 C3P01024 1663 aa12.2□□□□□ -0.46
CCNC-204ENST00000482541 ADGBQ8N7X0 1667 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms