RNA–Protein interactions for RNA: ENST00000480686.5

RNF220-213, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,835 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-213ENST00000480686 KIF21BO75037 1637 aa16.38■□□□□ 0.21
RNF220-213ENST00000480686 RRBP1Q9P2E9 1410 aaKnown RBP16.37■□□□□ 0.21
RNF220-213ENST00000480686 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
RNF220-213ENST00000480686 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
RNF220-213ENST00000480686 CNTLNQ9NXG0 1405 aa16.35■□□□□ 0.21
RNF220-213ENST00000480686 PDE4CQ08493 712 aa16.34■□□□□ 0.21
RNF220-213ENST00000480686 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
RNF220-213ENST00000480686 NCLP19338 710 aaKnown RBP16.34■□□□□ 0.21
RNF220-213ENST00000480686 ESPNB1AK53 854 aa16.33■□□□□ 0.21
RNF220-213ENST00000480686 CDK11BP21127 795 aaKnown RBP16.33■□□□□ 0.2
RNF220-213ENST00000480686 PANK2Q9BZ23 570 aa16.31■□□□□ 0.2
RNF220-213ENST00000480686 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
RNF220-213ENST00000480686 CLCN1P35523 988 aa16.31■□□□□ 0.2
RNF220-213ENST00000480686 KIAA1211Q6ZU35 1233 aa16.3■□□□□ 0.2
RNF220-213ENST00000480686 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
RNF220-213ENST00000480686 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
RNF220-213ENST00000480686 TPM2P07951 284 aa16.3■□□□□ 0.2
RNF220-213ENST00000480686 CENPQQ7L2Z9 268 aaPredicted RBP16.3■□□□□ 0.2
RNF220-213ENST00000480686 ARID3CA6NKF2 412 aa16.29■□□□□ 0.2
RNF220-213ENST00000480686 CDCA7LQ96GN5 454 aa16.29■□□□□ 0.2
RNF220-213ENST00000480686 MRE11P49959 708 aa16.28■□□□□ 0.2
RNF220-213ENST00000480686 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.2
RNF220-213ENST00000480686 XRCC6P12956 609 aaKnown RBP eCLIP16.27■□□□□ 0.2
RNF220-213ENST00000480686 MAPKBP1O60336 1514 aa16.27■□□□□ 0.2
RNF220-213ENST00000480686 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.19
RNF220-213ENST00000480686 UNC13AQ9UPW8 1703 aa16.27■□□□□ 0.19
RNF220-213ENST00000480686 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
RNF220-213ENST00000480686 ZHX1Q9UKY1 873 aaPredicted RBP16.26■□□□□ 0.19
RNF220-213ENST00000480686 WDR43Q15061 677 aaKnown RBP eCLIP16.26■□□□□ 0.19
RNF220-213ENST00000480686 R3HCC1Q9Y3T6 440 aaKnown RBP16.26■□□□□ 0.19
RNF220-213ENST00000480686 PRDM10Q9NQV6 1147 aa16.25■□□□□ 0.19
RNF220-213ENST00000480686 PTMAP06454 111 aaKnown RBP16.24■□□□□ 0.19
RNF220-213ENST00000480686 GOLGA6L22H0YM25 854 aa16.24■□□□□ 0.19
RNF220-213ENST00000480686 FHAD1B1AJZ9 1412 aa16.24■□□□□ 0.19
RNF220-213ENST00000480686 TRAK2O60296 914 aa16.24■□□□□ 0.19
RNF220-213ENST00000480686 CC2D1BQ5T0F9 858 aaKnown RBP16.24■□□□□ 0.19
RNF220-213ENST00000480686 KTN1Q86UP2 1357 aaKnown RBP16.23■□□□□ 0.19
RNF220-213ENST00000480686 PDE3BQ13370 1112 aa16.23■□□□□ 0.19
RNF220-213ENST00000480686 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.19
RNF220-213ENST00000480686 PHLDB1Q86UU1 1377 aa16.21■□□□□ 0.18
RNF220-213ENST00000480686 HSCBQ8IWL3 235 aa16.2■□□□□ 0.18
RNF220-213ENST00000480686 CARD11Q9BXL7 1154 aa16.2■□□□□ 0.18
RNF220-213ENST00000480686 GRPEL1Q9HAV7 217 aa16.2■□□□□ 0.18
RNF220-213ENST00000480686 HSP90AB1P08238 724 aaKnown RBP16.18■□□□□ 0.18
RNF220-213ENST00000480686 BBXQ8WY36 941 aaPredicted RBP16.17■□□□□ 0.18
RNF220-213ENST00000480686 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.17■□□□□ 0.18
RNF220-213ENST00000480686 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
RNF220-213ENST00000480686 MAP7D2Q96T17 732 aa16.16■□□□□ 0.18
RNF220-213ENST00000480686 MPHOSPH9Q99550 1183 aa16.16■□□□□ 0.18
RNF220-213ENST00000480686 MCM4P33991 863 aa16.16■□□□□ 0.18
RNF220-213ENST00000480686 MFAP1P55081 439 aaKnown RBP16.16■□□□□ 0.18
RNF220-213ENST00000480686 FOXD4L1Q9NU39 408 aa16.16■□□□□ 0.18
RNF220-213ENST00000480686 DDX11L8A8MPP1 907 aa16.14■□□□□ 0.17
RNF220-213ENST00000480686 GBP4Q96PP9 640 aa16.14■□□□□ 0.17
RNF220-213ENST00000480686 BAZ1AQ9NRL2 1556 aaPredicted RBP16.14■□□□□ 0.17
RNF220-213ENST00000480686 AAMPQ13685 434 aa16.14■□□□□ 0.17
RNF220-213ENST00000480686 C20orf194Q5TEA3 1177 aa16.14■□□□□ 0.17
RNF220-213ENST00000480686 CHMP5Q9NZZ3 219 aa16.13■□□□□ 0.17
RNF220-213ENST00000480686 CCDC18Q5T9S5 1454 aa16.13■□□□□ 0.17
RNF220-213ENST00000480686 ARHGAP35Q9NRY4 1499 aa16.13■□□□□ 0.17
RNF220-213ENST00000480686 RALBP1Q15311 655 aa16.13■□□□□ 0.17
RNF220-213ENST00000480686 NLRP13Q86W25 1043 aa16.13■□□□□ 0.17
RNF220-213ENST00000480686 CALD1Q05682 793 aaKnown RBP16.12■□□□□ 0.17
RNF220-213ENST00000480686 FGD1P98174 961 aa16.11■□□□□ 0.17
RNF220-213ENST00000480686 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
RNF220-213ENST00000480686 RNF123Q5XPI4 1314 aa16.1■□□□□ 0.17
RNF220-213ENST00000480686 MAPK8IP2Q13387 824 aaPredicted RBP16.09■□□□□ 0.17
RNF220-213ENST00000480686 FMN1Q68DA7 1419 aa16.09■□□□□ 0.17
RNF220-213ENST00000480686 CUX2O14529 1486 aa16.08■□□□□ 0.17
RNF220-213ENST00000480686 UQCRHLA0A096LP55 91 aa16.08■□□□□ 0.16
RNF220-213ENST00000480686 UQCRHP07919 91 aa16.08■□□□□ 0.16
RNF220-213ENST00000480686 NASPP49321 788 aaPredicted RBP16.08■□□□□ 0.16
RNF220-213ENST00000480686 C8orf34Q49A92 452 aa16.08■□□□□ 0.16
RNF220-213ENST00000480686 NBPF8Q3BBV2 869 aa16.07■□□□□ 0.16
RNF220-213ENST00000480686 KIF27Q86VH2 1401 aa16.07■□□□□ 0.16
RNF220-213ENST00000480686 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
RNF220-213ENST00000480686 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
RNF220-213ENST00000480686 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
RNF220-213ENST00000480686 NEUROD2Q15784 382 aa16.07■□□□□ 0.16
RNF220-213ENST00000480686 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
RNF220-213ENST00000480686 UACAQ9BZF9 1416 aa16.05■□□□□ 0.16
RNF220-213ENST00000480686 TOP2AP11388 1531 aaKnown RBP16.05■□□□□ 0.16
RNF220-213ENST00000480686 PLCB2Q00722 1185 aa16.05■□□□□ 0.16
RNF220-213ENST00000480686 GOLGA2Q08379 1002 aa16.04■□□□□ 0.16
RNF220-213ENST00000480686 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
RNF220-213ENST00000480686 MAPK8IP3Q9UPT6 1336 aa16.04■□□□□ 0.16
RNF220-213ENST00000480686 SMARCA4P51532 1647 aa16.04■□□□□ 0.16
RNF220-213ENST00000480686 ZSCAN30Q86W11 494 aa16.03■□□□□ 0.16
RNF220-213ENST00000480686 MTERF4Q7Z6M4 381 aaKnown RBP16.03■□□□□ 0.16
RNF220-213ENST00000480686 ZNF777Q9ULD5 760 aaPredicted RBP16.03■□□□□ 0.16
RNF220-213ENST00000480686 COG6Q9Y2V7 657 aa16.03■□□□□ 0.16
RNF220-213ENST00000480686 TBC1D2Q9BYX2 928 aa16.01■□□□□ 0.15
RNF220-213ENST00000480686 PDIA4P13667 645 aaKnown RBP16.01■□□□□ 0.15
RNF220-213ENST00000480686 ST20-MTHFSA0A0A6YYL1 179 aa16■□□□□ 0.15
RNF220-213ENST00000480686 XPCQ01831 940 aaPredicted RBP16■□□□□ 0.15
RNF220-213ENST00000480686 ZNF771Q7L3S4 317 aaPredicted RBP16■□□□□ 0.15
RNF220-213ENST00000480686 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
RNF220-213ENST00000480686 SMARCA2P51531 1590 aa16■□□□□ 0.15
RNF220-213ENST00000480686 CCDC173Q0VFZ6 552 aa16■□□□□ 0.15
RNF220-213ENST00000480686 SKOR2Q2VWA4 1001 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms