RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 KANK4Q5T7N3 995 aaPredicted RBP23.8■■□□□ 1.4
ABCF3-213ENST00000480539 NCOA2Q15596 1464 aa23.8■■□□□ 1.4
ABCF3-213ENST00000480539 AKNAQ7Z591 1439 aa23.79■■□□□ 1.4
ABCF3-213ENST00000480539 CCNB3Q8WWL7 1395 aa23.78■■□□□ 1.4
ABCF3-213ENST00000480539 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
ABCF3-213ENST00000480539 ITSN2Q9NZM3 1697 aa23.76■■□□□ 1.39
ABCF3-213ENST00000480539 FRMPD1Q5SYB0 1578 aa23.76■■□□□ 1.39
ABCF3-213ENST00000480539 PHLDB1Q86UU1 1377 aa23.76■■□□□ 1.39
ABCF3-213ENST00000480539 ADGRL1O94910 1474 aa23.75■■□□□ 1.39
ABCF3-213ENST00000480539 EFCAB2Q5VUJ9 269 aa23.73■■□□□ 1.39
ABCF3-213ENST00000480539 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
ABCF3-213ENST00000480539 ABCC1P33527 1531 aa23.71■■□□□ 1.39
ABCF3-213ENST00000480539 DENND4BO75064 1496 aaPredicted RBP23.7■■□□□ 1.38
ABCF3-213ENST00000480539 RICTORQ6R327 1708 aa23.7■■□□□ 1.38
ABCF3-213ENST00000480539 SCAPERQ9BY12 1400 aa23.69■■□□□ 1.38
ABCF3-213ENST00000480539 POGZQ7Z3K3 1410 aa23.67■■□□□ 1.38
ABCF3-213ENST00000480539 RAPGEF3O95398 923 aa23.67■■□□□ 1.38
ABCF3-213ENST00000480539 CFDP1Q9UEE9 299 aaPredicted RBP23.66■■□□□ 1.38
ABCF3-213ENST00000480539 ZNF777Q9ULD5 760 aaPredicted RBP23.66■■□□□ 1.38
ABCF3-213ENST00000480539 SYCP2Q9BX26 1530 aa23.65■■□□□ 1.38
ABCF3-213ENST00000480539 ARHGEF12Q9NZN5 1544 aa23.63■■□□□ 1.37
ABCF3-213ENST00000480539 MYOM3Q5VTT5 1437 aa23.62■■□□□ 1.37
ABCF3-213ENST00000480539 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
ABCF3-213ENST00000480539 CAMSAP2Q08AD1 1489 aa23.6■■□□□ 1.37
ABCF3-213ENST00000480539 ZNF518AQ6AHZ1 1483 aa23.6■■□□□ 1.37
ABCF3-213ENST00000480539 TRAPPC8Q9Y2L5 1435 aa23.59■■□□□ 1.37
ABCF3-213ENST00000480539 KDM5CP41229 1560 aa23.58■■□□□ 1.37
ABCF3-213ENST00000480539 PLEKHH2Q8IVE3 1493 aa23.58■■□□□ 1.37
ABCF3-213ENST00000480539 ARHGEF40Q8TER5 1519 aa23.58■■□□□ 1.36
ABCF3-213ENST00000480539 ZNF644Q9H582 1327 aaPredicted RBP23.58■■□□□ 1.36
ABCF3-213ENST00000480539 PPARGC1BQ86YN6 1023 aaKnown RBP23.55■■□□□ 1.36
ABCF3-213ENST00000480539 ZFYVE16Q7Z3T8 1539 aa23.54■■□□□ 1.36
ABCF3-213ENST00000480539 HECW2Q9P2P5 1572 aa23.54■■□□□ 1.36
ABCF3-213ENST00000480539 KIAA1107Q9UPP5 1409 aa23.54■■□□□ 1.36
ABCF3-213ENST00000480539 MIA2Q96PC5 1412 aa23.52■■□□□ 1.36
ABCF3-213ENST00000480539 YEATS2Q9ULM3 1422 aa23.52■■□□□ 1.36
ABCF3-213ENST00000480539 HNRNPMP52272 730 aaKnown RBP eCLIP23.52■■□□□ 1.36
ABCF3-213ENST00000480539 AFAP1Q8N556 730 aa23.52■■□□□ 1.36
ABCF3-213ENST00000480539 FGD6Q6ZV73 1430 aa23.5■■□□□ 1.35
ABCF3-213ENST00000480539 PTPN23Q9H3S7 1636 aa23.5■■□□□ 1.35
ABCF3-213ENST00000480539 MBD5Q9P267 1494 aa23.49■■□□□ 1.35
ABCF3-213ENST00000480539 MAGI2Q86UL8 1455 aa23.49■■□□□ 1.35
ABCF3-213ENST00000480539 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
ABCF3-213ENST00000480539 CCDC141Q6ZP82 1450 aa23.46■■□□□ 1.35
ABCF3-213ENST00000480539 INO80Q9ULG1 1556 aaPredicted RBP23.46■■□□□ 1.35
ABCF3-213ENST00000480539 ARHGEF5Q12774 1597 aa23.45■■□□□ 1.34
ABCF3-213ENST00000480539 DIP2CQ9Y2E4 1556 aa23.45■■□□□ 1.34
ABCF3-213ENST00000480539 MLH3Q9UHC1 1453 aa23.44■■□□□ 1.34
ABCF3-213ENST00000480539 MYT1LQ9UL68 1186 aa23.44■■□□□ 1.34
ABCF3-213ENST00000480539 KIDINS220Q9ULH0 1771 aa23.44■■□□□ 1.34
ABCF3-213ENST00000480539 ATP7AQ04656 1500 aa23.43■■□□□ 1.34
ABCF3-213ENST00000480539 TCOF1Q13428 1488 aaKnown RBP23.43■■□□□ 1.34
ABCF3-213ENST00000480539 SIGLEC1Q9BZZ2 1709 aa23.42■■□□□ 1.34
ABCF3-213ENST00000480539 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
ABCF3-213ENST00000480539 C9orf84Q5VXU9 1444 aa23.39■■□□□ 1.33
ABCF3-213ENST00000480539 CROCC2H7BZ55 1655 aa23.38■■□□□ 1.33
ABCF3-213ENST00000480539 ATP10AO60312 1499 aa23.37■■□□□ 1.33
ABCF3-213ENST00000480539 DNMT1P26358 1616 aaKnown RBP23.36■■□□□ 1.33
ABCF3-213ENST00000480539 REREQ9P2R6 1566 aa23.33■■□□□ 1.33
ABCF3-213ENST00000480539 MAST1Q9Y2H9 1570 aa23.33■■□□□ 1.33
ABCF3-213ENST00000480539 FAM50AQ14320 339 aaKnown RBP23.33■■□□□ 1.33
ABCF3-213ENST00000480539 DAPK1P53355 1430 aa23.33■■□□□ 1.32
ABCF3-213ENST00000480539 RTEL1-TNFRSF6BF6WH68 1400 aa23.32■■□□□ 1.32
ABCF3-213ENST00000480539 ARID4BQ4LE39 1312 aaPredicted RBP23.32■■□□□ 1.32
ABCF3-213ENST00000480539 ADGBQ8N7X0 1667 aa23.32■■□□□ 1.32
ABCF3-213ENST00000480539 ABCC5O15440 1437 aa23.31■■□□□ 1.32
ABCF3-213ENST00000480539 SHANK2Q9UPX8 1470 aa23.3■■□□□ 1.32
ABCF3-213ENST00000480539 RSPH4AQ5TD94 716 aa23.3■■□□□ 1.32
ABCF3-213ENST00000480539 BCORL1Q5H9F3 1711 aa23.3■■□□□ 1.32
ABCF3-213ENST00000480539 PLXNC1O60486 1568 aa23.28■■□□□ 1.32
ABCF3-213ENST00000480539 A2MP01023 1474 aa23.26■■□□□ 1.31
ABCF3-213ENST00000480539 TSPY4P0CV99 314 aa23.26■■□□□ 1.31
ABCF3-213ENST00000480539 TSPY10P0CW01 314 aa23.26■■□□□ 1.31
ABCF3-213ENST00000480539 RRBP1Q9P2E9 1410 aaKnown RBP23.25■■□□□ 1.31
ABCF3-213ENST00000480539 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
ABCF3-213ENST00000480539 AGLP35573 1532 aa23.23■■□□□ 1.31
ABCF3-213ENST00000480539 MADDQ8WXG6 1647 aa23.22■■□□□ 1.31
ABCF3-213ENST00000480539 ADAMTSL3P82987 1691 aa23.22■■□□□ 1.31
ABCF3-213ENST00000480539 MLECQ14165 292 aa23.21■■□□□ 1.31
ABCF3-213ENST00000480539 CHIC2Q9UKJ5 165 aa23.18■■□□□ 1.3
ABCF3-213ENST00000480539 PTPRKQ15262 1439 aa23.17■■□□□ 1.3
ABCF3-213ENST00000480539 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.17■■□□□ 1.3
ABCF3-213ENST00000480539 FER1L4A9Z1Z3 1794 aa23.17■■□□□ 1.3
ABCF3-213ENST00000480539 DHX29Q7Z478 1369 aaKnown RBP23.16■■□□□ 1.3
ABCF3-213ENST00000480539 KIF15Q9NS87 1388 aa23.16■■□□□ 1.3
ABCF3-213ENST00000480539 RIMS1Q86UR5 1692 aaKnown RBP23.16■■□□□ 1.3
ABCF3-213ENST00000480539 ADGRL2O95490 1459 aa23.16■■□□□ 1.3
ABCF3-213ENST00000480539 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.3
ABCF3-213ENST00000480539 ITGAEP38570 1179 aa23.14■■□□□ 1.29
ABCF3-213ENST00000480539 ANKRD30AQ9BXX3 1397 aa23.13■■□□□ 1.29
ABCF3-213ENST00000480539 RRP7BPQ9NSQ0 103 aa23.11■■□□□ 1.29
ABCF3-213ENST00000480539 EIF2AK4Q9P2K8 1649 aaKnown RBP23.11■■□□□ 1.29
ABCF3-213ENST00000480539 NCOA1Q15788 1441 aa23.1■■□□□ 1.29
ABCF3-213ENST00000480539 RNF17Q9BXT8 1623 aaKnown RBP23.08■■□□□ 1.28
ABCF3-213ENST00000480539 ERBINQ96RT1 1412 aa23.08■■□□□ 1.28
ABCF3-213ENST00000480539 PTPRMP28827 1452 aa23.07■■□□□ 1.28
ABCF3-213ENST00000480539 KIF3BO15066 747 aa23.06■■□□□ 1.28
ABCF3-213ENST00000480539 ROCK1Q13464 1354 aa23.04■■□□□ 1.28
ABCF3-213ENST00000480539 GGT6Q6P531 493 aa23.04■■□□□ 1.28
ABCF3-213ENST00000480539 AEBP2Q6ZN18 517 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms