RNA–Protein interactions for RNA: ENST00000479488.1

GSE1-209, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 2

Gene GSE1, Length 649 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-209ENST00000479488 CCNB3Q8WWL7 1395 aa24.21■■□□□ 1.47
GSE1-209ENST00000479488 EFCAB2Q5VUJ9 269 aa24.21■■□□□ 1.47
GSE1-209ENST00000479488 CDC42BPBQ9Y5S2 1711 aa24.21■■□□□ 1.47
GSE1-209ENST00000479488 COL17A1Q9UMD9 1497 aaPredicted RBP24.2■■□□□ 1.47
GSE1-209ENST00000479488 ITSN2Q9NZM3 1697 aa24.19■■□□□ 1.46
GSE1-209ENST00000479488 ADGRL1O94910 1474 aa24.19■■□□□ 1.46
GSE1-209ENST00000479488 NCOA2Q15596 1464 aa24.16■■□□□ 1.46
GSE1-209ENST00000479488 DENND4BO75064 1496 aaPredicted RBP24.15■■□□□ 1.46
GSE1-209ENST00000479488 ZNF777Q9ULD5 760 aaPredicted RBP24.14■■□□□ 1.45
GSE1-209ENST00000479488 GPATCH8Q9UKJ3 1502 aaKnown RBP24.14■■□□□ 1.45
GSE1-209ENST00000479488 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
GSE1-209ENST00000479488 CFDP1Q9UEE9 299 aaPredicted RBP24.12■■□□□ 1.45
GSE1-209ENST00000479488 SCAPERQ9BY12 1400 aa24.11■■□□□ 1.45
GSE1-209ENST00000479488 RAPGEF3O95398 923 aa24.11■■□□□ 1.45
GSE1-209ENST00000479488 RICTORQ6R327 1708 aa24.1■■□□□ 1.45
GSE1-209ENST00000479488 FRMPD1Q5SYB0 1578 aa24.09■■□□□ 1.45
GSE1-209ENST00000479488 ABCC1P33527 1531 aa24.07■■□□□ 1.44
GSE1-209ENST00000479488 POGZQ7Z3K3 1410 aa24.06■■□□□ 1.44
GSE1-209ENST00000479488 SAMD9LQ8IVG5 1584 aa24.06■■□□□ 1.44
GSE1-209ENST00000479488 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
GSE1-209ENST00000479488 SYCP2Q9BX26 1530 aa24.03■■□□□ 1.44
GSE1-209ENST00000479488 ZNF518AQ6AHZ1 1483 aa24.02■■□□□ 1.44
GSE1-209ENST00000479488 PLEKHH2Q8IVE3 1493 aa24.02■■□□□ 1.44
GSE1-209ENST00000479488 ZMYM4Q5VZL5 1548 aa24■■□□□ 1.43
GSE1-209ENST00000479488 MYOM3Q5VTT5 1437 aa23.98■■□□□ 1.43
GSE1-209ENST00000479488 CAMSAP2Q08AD1 1489 aa23.97■■□□□ 1.43
GSE1-209ENST00000479488 ZFYVE16Q7Z3T8 1539 aa23.97■■□□□ 1.43
GSE1-209ENST00000479488 ARHGEF40Q8TER5 1519 aa23.97■■□□□ 1.43
GSE1-209ENST00000479488 ARHGEF12Q9NZN5 1544 aa23.96■■□□□ 1.43
GSE1-209ENST00000479488 TRAPPC8Q9Y2L5 1435 aa23.95■■□□□ 1.42
GSE1-209ENST00000479488 HECW2Q9P2P5 1572 aa23.95■■□□□ 1.42
GSE1-209ENST00000479488 ZNF644Q9H582 1327 aaPredicted RBP23.94■■□□□ 1.42
GSE1-209ENST00000479488 HNRNPMP52272 730 aaKnown RBP eCLIP23.94■■□□□ 1.42
GSE1-209ENST00000479488 AFAP1Q8N556 730 aa23.94■■□□□ 1.42
GSE1-209ENST00000479488 KDM5CP41229 1560 aa23.94■■□□□ 1.42
GSE1-209ENST00000479488 MAGI2Q86UL8 1455 aa23.93■■□□□ 1.42
GSE1-209ENST00000479488 KIAA1107Q9UPP5 1409 aa23.93■■□□□ 1.42
GSE1-209ENST00000479488 PPARGC1BQ86YN6 1023 aaKnown RBP23.92■■□□□ 1.42
GSE1-209ENST00000479488 MIA2Q96PC5 1412 aa23.9■■□□□ 1.42
GSE1-209ENST00000479488 YEATS2Q9ULM3 1422 aa23.9■■□□□ 1.42
GSE1-209ENST00000479488 PTPN23Q9H3S7 1636 aa23.87■■□□□ 1.41
GSE1-209ENST00000479488 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
GSE1-209ENST00000479488 ARID4BQ4LE39 1312 aaPredicted RBP23.86■■□□□ 1.41
GSE1-209ENST00000479488 CCDC141Q6ZP82 1450 aa23.86■■□□□ 1.41
GSE1-209ENST00000479488 FGD6Q6ZV73 1430 aa23.85■■□□□ 1.41
GSE1-209ENST00000479488 MLH3Q9UHC1 1453 aa23.84■■□□□ 1.41
GSE1-209ENST00000479488 ABCA6Q8N139 1617 aa23.83■■□□□ 1.41
GSE1-209ENST00000479488 ATP7AQ04656 1500 aa23.83■■□□□ 1.41
GSE1-209ENST00000479488 MBD5Q9P267 1494 aa23.82■■□□□ 1.4
GSE1-209ENST00000479488 KIDINS220Q9ULH0 1771 aa23.82■■□□□ 1.4
GSE1-209ENST00000479488 ARHGEF5Q12774 1597 aa23.82■■□□□ 1.4
GSE1-209ENST00000479488 DIP2CQ9Y2E4 1556 aa23.82■■□□□ 1.4
GSE1-209ENST00000479488 C9orf84Q5VXU9 1444 aa23.81■■□□□ 1.4
GSE1-209ENST00000479488 INO80Q9ULG1 1556 aaPredicted RBP23.81■■□□□ 1.4
GSE1-209ENST00000479488 ATP10AO60312 1499 aa23.8■■□□□ 1.4
GSE1-209ENST00000479488 RSPH4AQ5TD94 716 aa23.78■■□□□ 1.4
GSE1-209ENST00000479488 FAM50AQ14320 339 aaKnown RBP23.77■■□□□ 1.4
GSE1-209ENST00000479488 TSPY4P0CV99 314 aa23.76■■□□□ 1.39
GSE1-209ENST00000479488 TSPY10P0CW01 314 aa23.76■■□□□ 1.39
GSE1-209ENST00000479488 TCOF1Q13428 1488 aaKnown RBP23.75■■□□□ 1.39
GSE1-209ENST00000479488 CROCC2H7BZ55 1655 aa23.72■■□□□ 1.39
GSE1-209ENST00000479488 SIGLEC1Q9BZZ2 1709 aa23.72■■□□□ 1.39
GSE1-209ENST00000479488 BCORL1Q5H9F3 1711 aa23.71■■□□□ 1.39
GSE1-209ENST00000479488 ADGBQ8N7X0 1667 aa23.71■■□□□ 1.39
GSE1-209ENST00000479488 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
GSE1-209ENST00000479488 MLECQ14165 292 aa23.71■■□□□ 1.39
GSE1-209ENST00000479488 AEBP2Q6ZN18 517 aaPredicted RBP23.71■■□□□ 1.39
GSE1-209ENST00000479488 DNMT1P26358 1616 aaKnown RBP23.7■■□□□ 1.39
GSE1-209ENST00000479488 RTEL1-TNFRSF6BF6WH68 1400 aa23.7■■□□□ 1.38
GSE1-209ENST00000479488 DAPK1P53355 1430 aa23.68■■□□□ 1.38
GSE1-209ENST00000479488 KDM4FA0A1W2PPD8 638 aa23.68■■□□□ 1.38
GSE1-209ENST00000479488 MAST1Q9Y2H9 1570 aa23.68■■□□□ 1.38
GSE1-209ENST00000479488 A2MP01023 1474 aa23.68■■□□□ 1.38
GSE1-209ENST00000479488 SHANK2Q9UPX8 1470 aa23.66■■□□□ 1.38
GSE1-209ENST00000479488 ABCC5O15440 1437 aa23.65■■□□□ 1.38
GSE1-209ENST00000479488 MADDQ8WXG6 1647 aa23.64■■□□□ 1.38
GSE1-209ENST00000479488 ADAMTSL3P82987 1691 aa23.63■■□□□ 1.37
GSE1-209ENST00000479488 AGLP35573 1532 aa23.63■■□□□ 1.37
GSE1-209ENST00000479488 FER1L4A9Z1Z3 1794 aa23.63■■□□□ 1.37
GSE1-209ENST00000479488 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
GSE1-209ENST00000479488 RIMS1Q86UR5 1692 aaKnown RBP23.6■■□□□ 1.37
GSE1-209ENST00000479488 CHIC2Q9UKJ5 165 aa23.6■■□□□ 1.37
GSE1-209ENST00000479488 ITGAEP38570 1179 aa23.58■■□□□ 1.37
GSE1-209ENST00000479488 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
GSE1-209ENST00000479488 DHX29Q7Z478 1369 aaKnown RBP23.56■■□□□ 1.36
GSE1-209ENST00000479488 ANKRD30AQ9BXX3 1397 aa23.56■■□□□ 1.36
GSE1-209ENST00000479488 KIF15Q9NS87 1388 aa23.56■■□□□ 1.36
GSE1-209ENST00000479488 RRBP1Q9P2E9 1410 aaKnown RBP23.55■■□□□ 1.36
GSE1-209ENST00000479488 PLPPR3Q6T4P5 718 aa23.54■■□□□ 1.36
GSE1-209ENST00000479488 GGT6Q6P531 493 aa23.53■■□□□ 1.36
GSE1-209ENST00000479488 RRP7BPQ9NSQ0 103 aa23.53■■□□□ 1.36
GSE1-209ENST00000479488 DUOX2Q9NRD8 1548 aa23.53■■□□□ 1.36
GSE1-209ENST00000479488 KIF3BO15066 747 aa23.52■■□□□ 1.36
GSE1-209ENST00000479488 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.52■■□□□ 1.369e-8■■■□□ 15.8
GSE1-209ENST00000479488 PTPRMP28827 1452 aa23.5■■□□□ 1.35
GSE1-209ENST00000479488 EIF2AK4Q9P2K8 1649 aaKnown RBP23.49■■□□□ 1.35
GSE1-209ENST00000479488 ADGRL2O95490 1459 aa23.49■■□□□ 1.35
GSE1-209ENST00000479488 NCOA1Q15788 1441 aa23.46■■□□□ 1.35
GSE1-209ENST00000479488 ERBINQ96RT1 1412 aa23.46■■□□□ 1.35
GSE1-209ENST00000479488 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms