RNA–Protein interactions for RNA: ENST00000479056.1

ACTL6A-208, Transcript of actin like 6A, humanhuman

TSL 4

Gene ACTL6A, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTL6A-208ENST00000479056 MAMSTRQ6ZN01 415 aa13.44□□□□□ -0.26
ACTL6A-208ENST00000479056 CRISPLD2Q9H0B8 497 aa13.44□□□□□ -0.26
ACTL6A-208ENST00000479056 NCKAP5LQ9HCH0 1330 aa13.43□□□□□ -0.26
ACTL6A-208ENST00000479056 PDE4AP27815 886 aa13.43□□□□□ -0.26
ACTL6A-208ENST00000479056 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.43□□□□□ -0.26
ACTL6A-208ENST00000479056 KDM2AQ9Y2K7 1162 aa13.42□□□□□ -0.26
ACTL6A-208ENST00000479056 TMC2Q8TDI7 906 aa13.4□□□□□ -0.26
ACTL6A-208ENST00000479056 SCUBE2Q9NQ36 999 aa13.4□□□□□ -0.26
ACTL6A-208ENST00000479056 GPHNQ9NQX3 736 aaPredicted RBP13.4□□□□□ -0.26
ACTL6A-208ENST00000479056 OTUD5Q96G74 571 aa13.39□□□□□ -0.27
ACTL6A-208ENST00000479056 TMEM92Q6UXU6 159 aa13.38□□□□□ -0.27
ACTL6A-208ENST00000479056 LARP6Q9BRS8 491 aaKnown RBP13.38□□□□□ -0.27
ACTL6A-208ENST00000479056 KIF3CO14782 793 aa13.37□□□□□ -0.27
ACTL6A-208ENST00000479056 C2orf72A6NCS6 295 aa13.36□□□□□ -0.27
ACTL6A-208ENST00000479056 MFSD10Q14728 455 aa13.36□□□□□ -0.27
ACTL6A-208ENST00000479056 WDR70Q9NW82 654 aa13.35□□□□□ -0.27
ACTL6A-208ENST00000479056 DDX27Q96GQ7 796 aaKnown RBP13.34□□□□□ -0.27
ACTL6A-208ENST00000479056 FOXK1P85037 733 aa13.31□□□□□ -0.28
ACTL6A-208ENST00000479056 DSG2Q14126 1118 aa13.3□□□□□ -0.28
ACTL6A-208ENST00000479056 PPP1R15BQ5SWA1 713 aa13.3□□□□□ -0.28
ACTL6A-208ENST00000479056 SLAIN1Q8ND83 568 aa13.29□□□□□ -0.28
ACTL6A-208ENST00000479056 POTEMA6NI47 508 aa13.25□□□□□ -0.29
ACTL6A-208ENST00000479056 PLPP6Q8IY26 295 aa13.25□□□□□ -0.29
ACTL6A-208ENST00000479056 E2F4Q16254 413 aa13.23□□□□□ -0.29
ACTL6A-208ENST00000479056 CAMK2BQ13554 666 aa13.21□□□□□ -0.29
ACTL6A-208ENST00000479056 POTEGQ6S5H5 508 aa13.2□□□□□ -0.3
ACTL6A-208ENST00000479056 P3H3Q8IVL6 736 aa13.2□□□□□ -0.3
ACTL6A-208ENST00000479056 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
ACTL6A-208ENST00000479056 SLC34A2O95436 690 aa13.13□□□□□ -0.31
ACTL6A-208ENST00000479056 SNPHO15079 494 aa13.12□□□□□ -0.31
ACTL6A-208ENST00000479056 DOK7Q18PE1 504 aa13.12□□□□□ -0.31
ACTL6A-208ENST00000479056 EMILIN3Q9NT22 766 aa13.12□□□□□ -0.31
ACTL6A-208ENST00000479056 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
ACTL6A-208ENST00000479056 ARIH1Q9Y4X5 557 aaPredicted RBP13.11□□□□□ -0.31
ACTL6A-208ENST00000479056 HOXB3P14651 431 aaPredicted RBP13.1□□□□□ -0.31
ACTL6A-208ENST00000479056 OXER1Q8TDS5 423 aa13.09□□□□□ -0.31
ACTL6A-208ENST00000479056 PTCD2Q8WV60 388 aaKnown RBP13.09□□□□□ -0.31
ACTL6A-208ENST00000479056 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
ACTL6A-208ENST00000479056 UPF1Q92900 1129 aaKnown RBP eCLIP13.06□□□□□ -0.32
ACTL6A-208ENST00000479056 ZSWIM6Q9HCJ5 1215 aa13.05□□□□□ -0.32
ACTL6A-208ENST00000479056 DPYSL4O14531 572 aa13.04□□□□□ -0.32
ACTL6A-208ENST00000479056 TBC1D12O60347 775 aa13.04□□□□□ -0.32
ACTL6A-208ENST00000479056 ZNF710Q8N1W2 664 aa13.03□□□□□ -0.32
ACTL6A-208ENST00000479056 MAP3K9P80192 1104 aa13.02□□□□□ -0.33
ACTL6A-208ENST00000479056 PCDHGA4Q9Y5G9 962 aa13.02□□□□□ -0.33
ACTL6A-208ENST00000479056 LCE2DQ5TA82 110 aaPredicted RBP12.99□□□□□ -0.33
ACTL6A-208ENST00000479056 SPDYE16A6NNV3 312 aaPredicted RBP12.98□□□□□ -0.33
ACTL6A-208ENST00000479056 PDIA6Q15084 440 aa12.98□□□□□ -0.33
ACTL6A-208ENST00000479056 NBR1Q14596 966 aa12.97□□□□□ -0.33
ACTL6A-208ENST00000479056 GPR153Q6NV75 609 aa12.97□□□□□ -0.33
ACTL6A-208ENST00000479056 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
ACTL6A-208ENST00000479056 ARSIQ5FYB1 569 aa12.95□□□□□ -0.34
ACTL6A-208ENST00000479056 BCANQ96GW7 911 aa12.95□□□□□ -0.34
ACTL6A-208ENST00000479056 EVI5O60447 810 aa12.94□□□□□ -0.34
ACTL6A-208ENST00000479056 KDM4FA0A1W2PPD8 638 aa12.92□□□□□ -0.34
ACTL6A-208ENST00000479056 HOXB1P14653 301 aaPredicted RBP12.92□□□□□ -0.34
ACTL6A-208ENST00000479056 FAM163AQ96GL9 167 aaPredicted RBP12.92□□□□□ -0.34
ACTL6A-208ENST00000479056 ANO8Q9HCE9 1232 aaPredicted RBP12.91□□□□□ -0.34
ACTL6A-208ENST00000479056 KHSRPQ92945 711 aaKnown RBP eCLIP12.9□□□□□ -0.34
ACTL6A-208ENST00000479056 PCDH10Q9P2E7 1040 aa12.9□□□□□ -0.34
ACTL6A-208ENST00000479056 SEMA3EO15041 775 aa12.89□□□□□ -0.35
ACTL6A-208ENST00000479056 ST18O60284 1047 aa12.89□□□□□ -0.35
ACTL6A-208ENST00000479056 NUDT7P0C024 238 aa12.89□□□□□ -0.35
ACTL6A-208ENST00000479056 TESPA1A2RU30 521 aaPredicted RBP12.86□□□□□ -0.35
ACTL6A-208ENST00000479056 PTGER2P43116 358 aa12.86□□□□□ -0.35
ACTL6A-208ENST00000479056 MLLT3P42568 568 aaPredicted RBP12.8□□□□□ -0.36
ACTL6A-208ENST00000479056 DDX12PQ92771 950 aa12.8□□□□□ -0.36
ACTL6A-208ENST00000479056 LHX6Q9UPM6 363 aa12.8□□□□□ -0.36
ACTL6A-208ENST00000479056 SMYD5Q6GMV2 418 aa12.79□□□□□ -0.36
ACTL6A-208ENST00000479056 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
ACTL6A-208ENST00000479056 PSDA5PKW4 1024 aaPredicted RBP12.78□□□□□ -0.36
ACTL6A-208ENST00000479056 TULP1O00294 542 aaPredicted RBP12.78□□□□□ -0.36
ACTL6A-208ENST00000479056 GRXCR2A6NFK2 248 aa12.77□□□□□ -0.37
ACTL6A-208ENST00000479056 PHF14O94880 888 aa12.77□□□□□ -0.37
ACTL6A-208ENST00000479056 EMP3P54852 163 aa12.77□□□□□ -0.37
ACTL6A-208ENST00000479056 MARVELD3Q96A59 401 aa12.77□□□□□ -0.37
ACTL6A-208ENST00000479056 FOSBP53539 338 aa12.76□□□□□ -0.37
ACTL6A-208ENST00000479056 EPAS1Q99814 870 aa12.75□□□□□ -0.37
ACTL6A-208ENST00000479056 ZNF454Q8N9F8 522 aa12.74□□□□□ -0.37
ACTL6A-208ENST00000479056 PCDHGA10Q9Y5H3 936 aa12.74□□□□□ -0.37
ACTL6A-208ENST00000479056 ERBB3P21860 1342 aa12.73□□□□□ -0.37
ACTL6A-208ENST00000479056 TYW1BQ6NUM6 668 aa12.73□□□□□ -0.37
ACTL6A-208ENST00000479056 OSBPP22059 807 aa12.72□□□□□ -0.37
ACTL6A-208ENST00000479056 PPP4R3BQ5MIZ7 849 aa12.72□□□□□ -0.37
ACTL6A-208ENST00000479056 FBXW7Q969H0 707 aa12.72□□□□□ -0.37
ACTL6A-208ENST00000479056 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.7□□□□□ -0.38
ACTL6A-208ENST00000479056 VARS2Q5ST30 1063 aaKnown RBP12.69□□□□□ -0.38
ACTL6A-208ENST00000479056 ZDHHC16Q969W1 377 aa12.69□□□□□ -0.38
ACTL6A-208ENST00000479056 FAM205CA6NFA0 338 aa12.68□□□□□ -0.38
ACTL6A-208ENST00000479056 EN1Q05925 392 aaPredicted RBP12.67□□□□□ -0.38
ACTL6A-208ENST00000479056 PRIM1P49642 420 aaKnown RBP12.66□□□□□ -0.38
ACTL6A-208ENST00000479056 LMOD2Q6P5Q4 547 aa12.66□□□□□ -0.38
ACTL6A-208ENST00000479056 MAP3K7O43318 606 aa12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 RBM26Q5T8P6 1007 aaKnown RBP12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 CDAN1Q8IWY9 1227 aa12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 HS3ST6Q96QI5 342 aa12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 ADAM33Q9BZ11 813 aa12.64□□□□□ -0.39
ACTL6A-208ENST00000479056 BCL2L12Q9HB09 334 aa12.63□□□□□ -0.39
ACTL6A-208ENST00000479056 POTEB3A0JP26 581 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms