RNA–Protein interactions for RNA: ENST00000478171.1

PLXNB1-214, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-214ENST00000478171 SCAPERQ9BY12 1400 aa26.82■■□□□ 1.88
PLXNB1-214ENST00000478171 PCF11O94913 1555 aaKnown RBP26.82■■□□□ 1.88
PLXNB1-214ENST00000478171 LRRIQ1Q96JM4 1722 aa26.82■■□□□ 1.88
PLXNB1-214ENST00000478171 MYO5CQ9NQX4 1742 aa26.81■■□□□ 1.88
PLXNB1-214ENST00000478171 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
PLXNB1-214ENST00000478171 PLPPR3Q6T4P5 718 aa26.78■■□□□ 1.88
PLXNB1-214ENST00000478171 MAGI2Q86UL8 1455 aa26.77■■□□□ 1.88
PLXNB1-214ENST00000478171 TROQ12816 1431 aaPredicted RBP26.77■■□□□ 1.88
PLXNB1-214ENST00000478171 MLECQ14165 292 aa26.74■■□□□ 1.87
PLXNB1-214ENST00000478171 ARHGAP5Q13017 1502 aa26.72■■□□□ 1.87
PLXNB1-214ENST00000478171 EFCAB2Q5VUJ9 269 aa26.7■■□□□ 1.86
PLXNB1-214ENST00000478171 FER1L4A9Z1Z3 1794 aa26.69■■□□□ 1.86
PLXNB1-214ENST00000478171 CDK11AQ9UQ88 783 aaPredicted RBP26.69■■□□□ 1.86
PLXNB1-214ENST00000478171 CLIP1P30622 1438 aa26.68■■□□□ 1.86
PLXNB1-214ENST00000478171 C9orf84Q5VXU9 1444 aa26.68■■□□□ 1.86
PLXNB1-214ENST00000478171 HSPA2P54652 639 aa26.66■■□□□ 1.86
PLXNB1-214ENST00000478171 ATP10AO60312 1499 aa26.66■■□□□ 1.86
PLXNB1-214ENST00000478171 KDM5CP41229 1560 aa26.65■■□□□ 1.86
PLXNB1-214ENST00000478171 ARHGEF12Q9NZN5 1544 aa26.65■■□□□ 1.86
PLXNB1-214ENST00000478171 ZNF518AQ6AHZ1 1483 aa26.64■■□□□ 1.86
PLXNB1-214ENST00000478171 CASKIN1Q8WXD9 1431 aa26.63■■□□□ 1.85
PLXNB1-214ENST00000478171 CDC42BPBQ9Y5S2 1711 aa26.62■■□□□ 1.85
PLXNB1-214ENST00000478171 AFAP1Q8N556 730 aa26.61■■□□□ 1.85
PLXNB1-214ENST00000478171 PREX2Q70Z35 1606 aa26.61■■□□□ 1.85
PLXNB1-214ENST00000478171 DIP2CQ9Y2E4 1556 aa26.6■■□□□ 1.85
PLXNB1-214ENST00000478171 CCDC18Q5T9S5 1454 aa26.6■■□□□ 1.85
PLXNB1-214ENST00000478171 ABCC1P33527 1531 aa26.58■■□□□ 1.85
PLXNB1-214ENST00000478171 ABCA6Q8N139 1617 aa26.57■■□□□ 1.84
PLXNB1-214ENST00000478171 FBXO41Q8TF61 875 aa26.55■■□□□ 1.84
PLXNB1-214ENST00000478171 TRAPPC8Q9Y2L5 1435 aa26.55■■□□□ 1.84
PLXNB1-214ENST00000478171 FYCO1Q9BQS8 1478 aa26.54■■□□□ 1.84
PLXNB1-214ENST00000478171 ITSN2Q9NZM3 1697 aa26.53■■□□□ 1.84
PLXNB1-214ENST00000478171 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
PLXNB1-214ENST00000478171 CEBPAP49715 358 aaPredicted RBP26.51■■□□□ 1.83
PLXNB1-214ENST00000478171 CDC42BPAQ5VT25 1732 aa26.51■■□□□ 1.83
PLXNB1-214ENST00000478171 REREQ9P2R6 1566 aa26.49■■□□□ 1.83
PLXNB1-214ENST00000478171 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
PLXNB1-214ENST00000478171 PREX1Q8TCU6 1659 aa26.46■■□□□ 1.83
PLXNB1-214ENST00000478171 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
PLXNB1-214ENST00000478171 KIDINS220Q9ULH0 1771 aa26.43■■□□□ 1.82
PLXNB1-214ENST00000478171 SYCP2Q9BX26 1530 aa26.42■■□□□ 1.82
PLXNB1-214ENST00000478171 AGLP35573 1532 aa26.39■■□□□ 1.82
PLXNB1-214ENST00000478171 ZNF777Q9ULD5 760 aaPredicted RBP26.39■■□□□ 1.82
PLXNB1-214ENST00000478171 GPATCH8Q9UKJ3 1502 aaKnown RBP26.39■■□□□ 1.81
PLXNB1-214ENST00000478171 C3P01024 1663 aa26.38■■□□□ 1.81
PLXNB1-214ENST00000478171 UHRF1BP1Q6BDS2 1440 aa26.36■■□□□ 1.81
PLXNB1-214ENST00000478171 STRCQ7RTU9 1775 aa26.3■■□□□ 1.8
PLXNB1-214ENST00000478171 HNRNPMP52272 730 aaKnown RBP eCLIP26.29■■□□□ 1.8
PLXNB1-214ENST00000478171 CERKQ8TCT0 537 aa26.27■■□□□ 1.8
PLXNB1-214ENST00000478171 ATP7AQ04656 1500 aa26.27■■□□□ 1.8
PLXNB1-214ENST00000478171 INO80Q9ULG1 1556 aaPredicted RBP26.27■■□□□ 1.8
PLXNB1-214ENST00000478171 MTUS2Q5JR59 1369 aa26.26■■□□□ 1.79
PLXNB1-214ENST00000478171 CCNB3Q8WWL7 1395 aa26.26■■□□□ 1.79
PLXNB1-214ENST00000478171 SPAG9O60271 1321 aaKnown RBP26.26■■□□□ 1.79
PLXNB1-214ENST00000478171 TIAM1Q13009 1591 aa26.25■■□□□ 1.79
PLXNB1-214ENST00000478171 SUPT6HQ7KZ85 1726 aaKnown RBP26.25■■□□□ 1.79
PLXNB1-214ENST00000478171 ESF1Q9H501 851 aaKnown RBP26.24■■□□□ 1.79
PLXNB1-214ENST00000478171 CFDP1Q9UEE9 299 aaPredicted RBP26.23■■□□□ 1.79
PLXNB1-214ENST00000478171 KIAA1107Q9UPP5 1409 aa26.22■■□□□ 1.79
PLXNB1-214ENST00000478171 PLXNC1O60486 1568 aa26.22■■□□□ 1.79
PLXNB1-214ENST00000478171 CNTLNQ9NXG0 1405 aa26.22■■□□□ 1.79
PLXNB1-214ENST00000478171 EHBP1L1Q8N3D4 1523 aa26.21■■□□□ 1.79
PLXNB1-214ENST00000478171 PLEKHH2Q8IVE3 1493 aa26.21■■□□□ 1.79
PLXNB1-214ENST00000478171 CEP162Q5TB80 1403 aa26.2■■□□□ 1.78
PLXNB1-214ENST00000478171 SETD1BQ9UPS6 1966 aaKnown RBP26.19■■□□□ 1.78
PLXNB1-214ENST00000478171 ZNF644Q9H582 1327 aaPredicted RBP26.18■■□□□ 1.78
PLXNB1-214ENST00000478171 MROH2AA6NES4 1674 aa26.18■■□□□ 1.78
PLXNB1-214ENST00000478171 A2MP01023 1474 aa26.17■■□□□ 1.78
PLXNB1-214ENST00000478171 CLTCQ00610 1675 aaKnown RBP26.15■■□□□ 1.78
PLXNB1-214ENST00000478171 NCOA1Q15788 1441 aa26.13■■□□□ 1.77
PLXNB1-214ENST00000478171 MBD5Q9P267 1494 aa26.12■■□□□ 1.77
PLXNB1-214ENST00000478171 ZMYM3Q14202 1370 aa26.12■■□□□ 1.77
PLXNB1-214ENST00000478171 NPATQ14207 1427 aa26.12■■□□□ 1.77
PLXNB1-214ENST00000478171 PTPRTO14522 1441 aa26.11■■□□□ 1.77
PLXNB1-214ENST00000478171 DMRT2Q9Y5R5 561 aa26.1■■□□□ 1.77
PLXNB1-214ENST00000478171 CAMSAP1Q5T5Y3 1602 aa26.09■■□□□ 1.77
PLXNB1-214ENST00000478171 MYO3AQ8NEV4 1616 aa26.08■■□□□ 1.77
PLXNB1-214ENST00000478171 ADGBQ8N7X0 1667 aa26.08■■□□□ 1.77
PLXNB1-214ENST00000478171 GGT6Q6P531 493 aa26.06■■□□□ 1.76
PLXNB1-214ENST00000478171 PTPRKQ15262 1439 aa26.05■■□□□ 1.76
PLXNB1-214ENST00000478171 NCOA2Q15596 1464 aa26.04■■□□□ 1.76
PLXNB1-214ENST00000478171 LTBP4Q8N2S1 1624 aa26.04■■□□□ 1.76
PLXNB1-214ENST00000478171 CAMSAP2Q08AD1 1489 aa26.03■■□□□ 1.76
PLXNB1-214ENST00000478171 ZNF142P52746 1687 aaPredicted RBP26.03■■□□□ 1.76
PLXNB1-214ENST00000478171 CEP170BQ9Y4F5 1589 aaPredicted RBP26■■□□□ 1.75
PLXNB1-214ENST00000478171 CCDC141Q6ZP82 1450 aa26■■□□□ 1.75
PLXNB1-214ENST00000478171 RTEL1-TNFRSF6BF6WH68 1400 aa25.98■■□□□ 1.75
PLXNB1-214ENST00000478171 NCKAP5LQ9HCH0 1330 aa25.98■■□□□ 1.75
PLXNB1-214ENST00000478171 DHX29Q7Z478 1369 aaKnown RBP25.95■■□□□ 1.75
PLXNB1-214ENST00000478171 PLA2R1Q13018 1463 aa25.91■■□□□ 1.74
PLXNB1-214ENST00000478171 TCOF1Q13428 1488 aaKnown RBP25.91■■□□□ 1.74
PLXNB1-214ENST00000478171 ZNF335Q9H4Z2 1342 aaPredicted RBP25.9■■□□□ 1.74
PLXNB1-214ENST00000478171 VPS8Q8N3P4 1428 aa25.9■■□□□ 1.74
PLXNB1-214ENST00000478171 LOC105371045A0A1W2PR82 267 aa25.89■■□□□ 1.74
PLXNB1-214ENST00000478171 KIF3BO15066 747 aa25.89■■□□□ 1.74
PLXNB1-214ENST00000478171 KDM5DQ9BY66 1539 aa25.88■■□□□ 1.73
PLXNB1-214ENST00000478171 ARHGEF5Q12774 1597 aa25.87■■□□□ 1.73
PLXNB1-214ENST00000478171 A2ML1A8K2U0 1454 aa25.87■■□□□ 1.73
PLXNB1-214ENST00000478171 LRRC9Q6ZRR7 1453 aa25.87■■□□□ 1.73
PLXNB1-214ENST00000478171 PPP6R1Q9UPN7 881 aa25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms