RNA–Protein interactions for RNA: ENST00000477824.5

MED15-225, Transcript of mediator complex subunit 15, human

TSL 5

Gene MED15, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MED15-225	ENST00000477824	VPS8	Q8N3P4	1428 aa		33.23	■■■□□ 2.91
MED15-225	ENST00000477824	RICTOR	Q6R327	1708 aa		33.2	■■■□□ 2.91
MED15-225	ENST00000477824	CDC42BPB	Q9Y5S2	1711 aa		33.2	■■■□□ 2.91
MED15-225	ENST00000477824	CDC42BPA	Q5VT25	1732 aa		33.15	■■■□□ 2.9
MED15-225	ENST00000477824	PREX2	Q70Z35	1606 aa		33.14	■■■□□ 2.9
MED15-225	ENST00000477824	ZNF777	Q9ULD5	760 aa	Predicted RBP	33.13	■■■□□ 2.89
MED15-225	ENST00000477824	GPATCH8	Q9UKJ3	1502 aa	Known RBP	33.11	■■■□□ 2.89
MED15-225	ENST00000477824	POGZ	Q7Z3K3	1410 aa		33.11	■■■□□ 2.89
MED15-225	ENST00000477824	AFAP1	Q8N556	730 aa		33.09	■■■□□ 2.89
MED15-225	ENST00000477824	CCNB3	Q8WWL7	1395 aa		33.09	■■■□□ 2.89
MED15-225	ENST00000477824	EHBP1L1	Q8N3D4	1523 aa		33.08	■■■□□ 2.89
MED15-225	ENST00000477824	TIAM1	Q13009	1591 aa		33.07	■■■□□ 2.88
MED15-225	ENST00000477824	YEATS2	Q9ULM3	1422 aa		33.05	■■■□□ 2.88
MED15-225	ENST00000477824	CFDP1	Q9UEE9	299 aa	Predicted RBP	33.04	■■■□□ 2.88
MED15-225	ENST00000477824	ZMYM4	Q5VZL5	1548 aa		33.03	■■■□□ 2.88
MED15-225	ENST00000477824	ARID4B	Q4LE39	1312 aa	Predicted RBP	33.02	■■■□□ 2.88
MED15-225	ENST00000477824	ARHGEF12	Q9NZN5	1544 aa		33.02	■■■□□ 2.88
MED15-225	ENST00000477824	MYT1L	Q9UL68	1186 aa		33.02	■■■□□ 2.88
MED15-225	ENST00000477824	KANK4	Q5T7N3	995 aa	Predicted RBP	33.01	■■■□□ 2.87
MED15-225	ENST00000477824	ARHGEF40	Q8TER5	1519 aa		33.01	■■■□□ 2.87
MED15-225	ENST00000477824	ZFYVE16	Q7Z3T8	1539 aa		33	■■■□□ 2.87
MED15-225	ENST00000477824	TRAPPC8	Q9Y2L5	1435 aa		33	■■■□□ 2.87
MED15-225	ENST00000477824	ABCC1	P33527	1531 aa		32.99	■■■□□ 2.87
MED15-225	ENST00000477824	ZNF518A	Q6AHZ1	1483 aa		32.98	■■■□□ 2.87
MED15-225	ENST00000477824	HNRNPM	P52272	730 aa	Known RBP eCLIP	32.97	■■■□□ 2.87	4e-6	■■□□□ 12
MED15-225	ENST00000477824	SAMD9L	Q8IVG5	1584 aa		32.96	■■■□□ 2.87
MED15-225	ENST00000477824	MAGI2	Q86UL8	1455 aa		32.96	■■■□□ 2.87
MED15-225	ENST00000477824	NCOA2	Q15596	1464 aa		32.95	■■■□□ 2.87
MED15-225	ENST00000477824	LRRC9	Q6ZRR7	1453 aa		32.95	■■■□□ 2.87
MED15-225	ENST00000477824	ITSN2	Q9NZM3	1697 aa		32.94	■■■□□ 2.86
MED15-225	ENST00000477824	SUPT6H	Q7KZ85	1726 aa	Known RBP	32.94	■■■□□ 2.86
MED15-225	ENST00000477824	ZNF644	Q9H582	1327 aa	Predicted RBP	32.93	■■■□□ 2.86
MED15-225	ENST00000477824	APLP2	Q06481	763 aa		32.92	■■■□□ 2.86
MED15-225	ENST00000477824	KDM5C	P41229	1560 aa		32.9	■■■□□ 2.86
MED15-225	ENST00000477824	SYCP2	Q9BX26	1530 aa		32.89	■■■□□ 2.86
MED15-225	ENST00000477824	MAP3K1	Q13233	1512 aa		32.88	■■■□□ 2.85
MED15-225	ENST00000477824	SIGLEC1	Q9BZZ2	1709 aa		32.87	■■■□□ 2.85
MED15-225	ENST00000477824	ATP10A	O60312	1499 aa		32.86	■■■□□ 2.85
MED15-225	ENST00000477824	MLEC	Q14165	292 aa		32.85	■■■□□ 2.85
MED15-225	ENST00000477824	HECW2	Q9P2P5	1572 aa		32.84	■■■□□ 2.85
MED15-225	ENST00000477824	BCORL1	Q5H9F3	1711 aa		32.82	■■■□□ 2.85
MED15-225	ENST00000477824	PLEKHH2	Q8IVE3	1493 aa		32.81	■■■□□ 2.84
MED15-225	ENST00000477824	MLH3	Q9UHC1	1453 aa		32.81	■■■□□ 2.84
MED15-225	ENST00000477824	KIAA1107	Q9UPP5	1409 aa		32.81	■■■□□ 2.84
MED15-225	ENST00000477824	ADAMTSL3	P82987	1691 aa		32.81	■■■□□ 2.84
MED15-225	ENST00000477824	C9orf84	Q5VXU9	1444 aa		32.79	■■■□□ 2.84
MED15-225	ENST00000477824	SPAG9	O60271	1321 aa	Known RBP	32.78	■■■□□ 2.84
MED15-225	ENST00000477824	DIP2C	Q9Y2E4	1556 aa		32.77	■■■□□ 2.84
MED15-225	ENST00000477824	ABCA6	Q8N139	1617 aa		32.76	■■■□□ 2.83
MED15-225	ENST00000477824	KIDINS220	Q9ULH0	1771 aa		32.75	■■■□□ 2.83
MED15-225	ENST00000477824	MADD	Q8WXG6	1647 aa		32.73	■■■□□ 2.83
MED15-225	ENST00000477824	MBD5	Q9P267	1494 aa		32.72	■■■□□ 2.83
MED15-225	ENST00000477824	CAMSAP2	Q08AD1	1489 aa		32.71	■■■□□ 2.83
MED15-225	ENST00000477824	PLPPR3	Q6T4P5	718 aa		32.69	■■■□□ 2.82
MED15-225	ENST00000477824	PTPRM	P28827	1452 aa		32.68	■■■□□ 2.82
MED15-225	ENST00000477824	RIMS1	Q86UR5	1692 aa	Known RBP	32.66	■■■□□ 2.82
MED15-225	ENST00000477824	ATP7A	Q04656	1500 aa		32.65	■■■□□ 2.82
MED15-225	ENST00000477824	MYOM3	Q5VTT5	1437 aa		32.64	■■■□□ 2.82
MED15-225	ENST00000477824	INO80	Q9ULG1	1556 aa	Predicted RBP	32.61	■■■□□ 2.81
MED15-225	ENST00000477824	RERE	Q9P2R6	1566 aa		32.6	■■■□□ 2.81
MED15-225	ENST00000477824	CCDC141	Q6ZP82	1450 aa		32.58	■■■□□ 2.81
MED15-225	ENST00000477824	FER1L4	A9Z1Z3	1794 aa		32.56	■■■□□ 2.8
MED15-225	ENST00000477824	RSPH4A	Q5TD94	716 aa		32.56	■■■□□ 2.8
MED15-225	ENST00000477824	MIA2	Q96PC5	1412 aa		32.56	■■■□□ 2.8
MED15-225	ENST00000477824	AGL	P35573	1532 aa		32.53	■■■□□ 2.8
MED15-225	ENST00000477824	PPARGC1B	Q86YN6	1023 aa	Known RBP	32.53	■■■□□ 2.8
MED15-225	ENST00000477824	TSPY4	P0CV99	314 aa		32.52	■■■□□ 2.8
MED15-225	ENST00000477824	TSPY10	P0CW01	314 aa		32.52	■■■□□ 2.8
MED15-225	ENST00000477824	A2M	P01023	1474 aa		32.52	■■■□□ 2.8
MED15-225	ENST00000477824	RTEL1-TNFRSF6B	F6WH68	1400 aa		32.51	■■■□□ 2.79
MED15-225	ENST00000477824	ARHGEF5	Q12774	1597 aa		32.5	■■■□□ 2.79
MED15-225	ENST00000477824	CEBPA	P49715	358 aa	Predicted RBP	32.49	■■■□□ 2.79
MED15-225	ENST00000477824	PTPN23	Q9H3S7	1636 aa		32.45	■■■□□ 2.79
MED15-225	ENST00000477824	ESF1	Q9H501	851 aa	Known RBP	32.45	■■■□□ 2.79
MED15-225	ENST00000477824	ADGB	Q8N7X0	1667 aa		32.45	■■■□□ 2.79
MED15-225	ENST00000477824	FGD6	Q6ZV73	1430 aa		32.44	■■■□□ 2.78
MED15-225	ENST00000477824	GGT6	Q6P531	493 aa		32.43	■■■□□ 2.78
MED15-225	ENST00000477824	PLXNC1	O60486	1568 aa		32.42	■■■□□ 2.78
MED15-225	ENST00000477824	DHX29	Q7Z478	1369 aa	Known RBP	32.41	■■■□□ 2.78
MED15-225	ENST00000477824	KIF3B	O15066	747 aa		32.35	■■■□□ 2.77
MED15-225	ENST00000477824	FAM50A	Q14320	339 aa	Known RBP	32.35	■■■□□ 2.77
MED15-225	ENST00000477824	ABCC5	O15440	1437 aa		32.34	■■■□□ 2.77
MED15-225	ENST00000477824	TCOF1	Q13428	1488 aa	Known RBP	32.34	■■■□□ 2.77
MED15-225	ENST00000477824	MAST1	Q9Y2H9	1570 aa		32.32	■■■□□ 2.77
MED15-225	ENST00000477824	CHIC2	Q9UKJ5	165 aa		32.3	■■■□□ 2.76
MED15-225	ENST00000477824	DAPK1	P53355	1430 aa		32.29	■■■□□ 2.76
MED15-225	ENST00000477824	C3	P01024	1663 aa		32.27	■■■□□ 2.76
MED15-225	ENST00000477824	CNTLN	Q9NXG0	1405 aa		32.26	■■■□□ 2.76
MED15-225	ENST00000477824	RRP7BP	Q9NSQ0	103 aa		32.26	■■■□□ 2.75
MED15-225	ENST00000477824	DNMT1	P26358	1616 aa	Known RBP	32.26	■■■□□ 2.75
MED15-225	ENST00000477824	CLTC	Q00610	1675 aa	Known RBP	32.25	■■■□□ 2.75
MED15-225	ENST00000477824	LMTK3	Q96Q04	1460 aa		32.25	■■■□□ 2.75
MED15-225	ENST00000477824	HSPA2	P54652	639 aa		32.25	■■■□□ 2.75
MED15-225	ENST00000477824	ZMYM3	Q14202	1370 aa		32.24	■■■□□ 2.75
MED15-225	ENST00000477824	CROCC2	H7BZ55	1655 aa		32.24	■■■□□ 2.75
MED15-225	ENST00000477824	SHANK2	Q9UPX8	1470 aa		32.2	■■■□□ 2.75
MED15-225	ENST00000477824	PPP6R1	Q9UPN7	881 aa		32.19	■■■□□ 2.74
MED15-225	ENST00000477824	KIF15	Q9NS87	1388 aa		32.19	■■■□□ 2.74
MED15-225	ENST00000477824	MROH2A	A6NES4	1674 aa		32.15	■■■□□ 2.74
MED15-225	ENST00000477824	WASHC2C	Q9Y4E1	1318 aa		32.14	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms