RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 PLCH2O75038 1416 aa16.48■□□□□ 0.23
PARVB-206ENST00000477438 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
PARVB-206ENST00000477438 ITSN2Q9NZM3 1697 aa16.48■□□□□ 0.23
PARVB-206ENST00000477438 ARAP3Q8WWN8 1544 aa16.48■□□□□ 0.23
PARVB-206ENST00000477438 PREX2Q70Z35 1606 aa16.48■□□□□ 0.23
PARVB-206ENST00000477438 ADGRL1O94910 1474 aa16.45■□□□□ 0.22
PARVB-206ENST00000477438 AKNAQ7Z591 1439 aa16.45■□□□□ 0.22
PARVB-206ENST00000477438 NCOA2Q15596 1464 aa16.43■□□□□ 0.22
PARVB-206ENST00000477438 CDC42BPAQ5VT25 1732 aa16.43■□□□□ 0.22
PARVB-206ENST00000477438 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
PARVB-206ENST00000477438 DENND4BO75064 1496 aaPredicted RBP16.42■□□□□ 0.22
PARVB-206ENST00000477438 CFDP1Q9UEE9 299 aaPredicted RBP16.42■□□□□ 0.22
PARVB-206ENST00000477438 CDC42BPBQ9Y5S2 1711 aa16.4■□□□□ 0.22
PARVB-206ENST00000477438 MYT1LQ9UL68 1186 aa16.39■□□□□ 0.21
PARVB-206ENST00000477438 PLEKHH2Q8IVE3 1493 aa16.39■□□□□ 0.21
PARVB-206ENST00000477438 GPATCH8Q9UKJ3 1502 aaKnown RBP16.39■□□□□ 0.21
PARVB-206ENST00000477438 SCAPERQ9BY12 1400 aa16.38■□□□□ 0.21
PARVB-206ENST00000477438 KANK4Q5T7N3 995 aaPredicted RBP16.37■□□□□ 0.21
PARVB-206ENST00000477438 POGZQ7Z3K3 1410 aa16.36■□□□□ 0.21
PARVB-206ENST00000477438 ZNF518AQ6AHZ1 1483 aa16.35■□□□□ 0.21
PARVB-206ENST00000477438 ABCC1P33527 1531 aa16.35■□□□□ 0.21
PARVB-206ENST00000477438 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
PARVB-206ENST00000477438 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
PARVB-206ENST00000477438 MYOM3Q5VTT5 1437 aa16.33■□□□□ 0.2
PARVB-206ENST00000477438 SYCP2Q9BX26 1530 aa16.33■□□□□ 0.2
PARVB-206ENST00000477438 SAMD9LQ8IVG5 1584 aa16.33■□□□□ 0.2
PARVB-206ENST00000477438 RICTORQ6R327 1708 aa16.33■□□□□ 0.2
PARVB-206ENST00000477438 ZEB1P37275 1124 aaPredicted RBP16.32■□□□□ 0.2
PARVB-206ENST00000477438 FRMPD1Q5SYB0 1578 aa16.31■□□□□ 0.2
PARVB-206ENST00000477438 CAMSAP2Q08AD1 1489 aa16.31■□□□□ 0.2
PARVB-206ENST00000477438 ZMYM4Q5VZL5 1548 aa16.29■□□□□ 0.2
PARVB-206ENST00000477438 ZFYVE16Q7Z3T8 1539 aa16.29■□□□□ 0.2
PARVB-206ENST00000477438 ARHGEF40Q8TER5 1519 aa16.29■□□□□ 0.2
PARVB-206ENST00000477438 MIA2Q96PC5 1412 aa16.28■□□□□ 0.2
PARVB-206ENST00000477438 HECW2Q9P2P5 1572 aa16.28■□□□□ 0.2
PARVB-206ENST00000477438 MAGI2Q86UL8 1455 aa16.28■□□□□ 0.2
PARVB-206ENST00000477438 KIAA1107Q9UPP5 1409 aa16.28■□□□□ 0.2
PARVB-206ENST00000477438 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
PARVB-206ENST00000477438 PPARGC1BQ86YN6 1023 aaKnown RBP16.26■□□□□ 0.19
PARVB-206ENST00000477438 KDM5CP41229 1560 aa16.26■□□□□ 0.19
PARVB-206ENST00000477438 ARID4BQ4LE39 1312 aaPredicted RBP16.25■□□□□ 0.19
PARVB-206ENST00000477438 SPAG9O60271 1321 aaKnown RBP16.24■□□□□ 0.19
PARVB-206ENST00000477438 CCDC141Q6ZP82 1450 aa16.24■□□□□ 0.19
PARVB-206ENST00000477438 PTPN23Q9H3S7 1636 aa16.24■□□□□ 0.19
PARVB-206ENST00000477438 AFAP1Q8N556 730 aa16.24■□□□□ 0.19
PARVB-206ENST00000477438 FGD6Q6ZV73 1430 aa16.24■□□□□ 0.19
PARVB-206ENST00000477438 TRAPPC8Q9Y2L5 1435 aa16.24■□□□□ 0.19
PARVB-206ENST00000477438 ZNF644Q9H582 1327 aaPredicted RBP16.23■□□□□ 0.19
PARVB-206ENST00000477438 ARHGEF12Q9NZN5 1544 aa16.23■□□□□ 0.19
PARVB-206ENST00000477438 RSPH4AQ5TD94 716 aa16.22■□□□□ 0.19
PARVB-206ENST00000477438 TSPY4P0CV99 314 aa16.21■□□□□ 0.19
PARVB-206ENST00000477438 TSPY10P0CW01 314 aa16.21■□□□□ 0.19
PARVB-206ENST00000477438 FAM50AQ14320 339 aaKnown RBP16.21■□□□□ 0.19
PARVB-206ENST00000477438 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
PARVB-206ENST00000477438 MLH3Q9UHC1 1453 aa16.2■□□□□ 0.18
PARVB-206ENST00000477438 ARHGEF5Q12774 1597 aa16.2■□□□□ 0.18
PARVB-206ENST00000477438 C9orf84Q5VXU9 1444 aa16.19■□□□□ 0.18
PARVB-206ENST00000477438 YEATS2Q9ULM3 1422 aa16.19■□□□□ 0.18
PARVB-206ENST00000477438 INO80Q9ULG1 1556 aaPredicted RBP16.17■□□□□ 0.18
PARVB-206ENST00000477438 ATP10AO60312 1499 aa16.17■□□□□ 0.18
PARVB-206ENST00000477438 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
PARVB-206ENST00000477438 TCOF1Q13428 1488 aaKnown RBP16.16■□□□□ 0.18
PARVB-206ENST00000477438 ABCA6Q8N139 1617 aa16.16■□□□□ 0.18
PARVB-206ENST00000477438 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
PARVB-206ENST00000477438 KIDINS220Q9ULH0 1771 aa16.14■□□□□ 0.17
PARVB-206ENST00000477438 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
PARVB-206ENST00000477438 RTEL1-TNFRSF6BF6WH68 1400 aa16.13■□□□□ 0.17
PARVB-206ENST00000477438 ADGBQ8N7X0 1667 aa16.13■□□□□ 0.17
PARVB-206ENST00000477438 DNMT1P26358 1616 aaKnown RBP16.12■□□□□ 0.17
PARVB-206ENST00000477438 SHANK2Q9UPX8 1470 aa16.12■□□□□ 0.17
PARVB-206ENST00000477438 DAPK1P53355 1430 aa16.11■□□□□ 0.17
PARVB-206ENST00000477438 REREQ9P2R6 1566 aa16.1■□□□□ 0.17
PARVB-206ENST00000477438 MAST1Q9Y2H9 1570 aa16.1■□□□□ 0.17
PARVB-206ENST00000477438 ESF1Q9H501 851 aaKnown RBP16.1■□□□□ 0.17
PARVB-206ENST00000477438 A2MP01023 1474 aa16.1■□□□□ 0.17
PARVB-206ENST00000477438 MLECQ14165 292 aa16.09■□□□□ 0.17
PARVB-206ENST00000477438 PLXNC1O60486 1568 aa16.08■□□□□ 0.16
PARVB-206ENST00000477438 ITGAEP38570 1179 aa16.07■□□□□ 0.16
PARVB-206ENST00000477438 ANKRD30AQ9BXX3 1397 aa16.07■□□□□ 0.16
PARVB-206ENST00000477438 ABCC5O15440 1437 aa16.07■□□□□ 0.16
PARVB-206ENST00000477438 BCORL1Q5H9F3 1711 aa16.07■□□□□ 0.16
PARVB-206ENST00000477438 CHIC2Q9UKJ5 165 aa16.05■□□□□ 0.16
PARVB-206ENST00000477438 AGLP35573 1532 aa16.04■□□□□ 0.16
PARVB-206ENST00000477438 KIF15Q9NS87 1388 aa16.04■□□□□ 0.16
PARVB-206ENST00000477438 RRBP1Q9P2E9 1410 aaKnown RBP16.03■□□□□ 0.16
PARVB-206ENST00000477438 FER1L4A9Z1Z3 1794 aa16.03■□□□□ 0.16
PARVB-206ENST00000477438 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.03■□□□□ 0.16
PARVB-206ENST00000477438 DUOX2Q9NRD8 1548 aa16.03■□□□□ 0.16
PARVB-206ENST00000477438 DHX29Q7Z478 1369 aaKnown RBP16.02■□□□□ 0.16
PARVB-206ENST00000477438 RRP7BPQ9NSQ0 103 aa16.02■□□□□ 0.16
PARVB-206ENST00000477438 MADDQ8WXG6 1647 aa16.01■□□□□ 0.15
PARVB-206ENST00000477438 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
PARVB-206ENST00000477438 SIGLEC1Q9BZZ2 1709 aa16■□□□□ 0.15
PARVB-206ENST00000477438 ADAMTSL3P82987 1691 aa15.99■□□□□ 0.15
PARVB-206ENST00000477438 EIF2AK4Q9P2K8 1649 aaKnown RBP15.99■□□□□ 0.15
PARVB-206ENST00000477438 KIF3BO15066 747 aa15.99■□□□□ 0.15
PARVB-206ENST00000477438 GGT6Q6P531 493 aa15.99■□□□□ 0.15
PARVB-206ENST00000477438 ERBINQ96RT1 1412 aa15.99■□□□□ 0.15
PARVB-206ENST00000477438 ADGRL2O95490 1459 aa15.98■□□□□ 0.15
PARVB-206ENST00000477438 KDM4FA0A1W2PPD8 638 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms