RNA–Protein interactions for RNA: ENST00000477438.1

PARVB-206, Transcript of parvin beta, humanhuman

TSL 5

Gene PARVB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARVB-206ENST00000477438 NISCHQ9Y2I1 1504 aa25.16■■□□□ 1.62
PARVB-206ENST00000477438 CCDC180Q9P1Z9 1646 aa22.39■■□□□ 1.17
PARVB-206ENST00000477438 ABCC9O60706 1549 aa21.75■■□□□ 1.07
PARVB-206ENST00000477438 DCAF8L2P0C7V8 631 aa21.09■□□□□ 0.97
PARVB-206ENST00000477438 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
PARVB-206ENST00000477438 NACADO15069 1562 aa21■□□□□ 0.95
PARVB-206ENST00000477438 ZCCHC6Q5VYS8 1495 aaKnown RBP21■□□□□ 0.95
PARVB-206ENST00000477438 MYO15BQ96JP2 1530 aa20.85■□□□□ 0.93
PARVB-206ENST00000477438 DCAF1Q9Y4B6 1507 aa20.82■□□□□ 0.92
PARVB-206ENST00000477438 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
PARVB-206ENST00000477438 UNC13AQ9UPW8 1703 aa20.44■□□□□ 0.86
PARVB-206ENST00000477438 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
PARVB-206ENST00000477438 BICRAQ9NZM4 1560 aa20.22■□□□□ 0.83
PARVB-206ENST00000477438 SHROOM4Q9ULL8 1493 aa20.18■□□□□ 0.82
PARVB-206ENST00000477438 EIF4G1Q04637 1599 aaKnown RBP19.78■□□□□ 0.76
PARVB-206ENST00000477438 CC2D2AQ9P2K1 1620 aa19.66■□□□□ 0.74
PARVB-206ENST00000477438 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
PARVB-206ENST00000477438 BAZ1AQ9NRL2 1556 aaPredicted RBP19.57■□□□□ 0.72
PARVB-206ENST00000477438 CECR2Q9BXF3 1484 aa19.54■□□□□ 0.72
PARVB-206ENST00000477438 SMARCA4P51532 1647 aa19.53■□□□□ 0.72
PARVB-206ENST00000477438 SMARCA2P51531 1590 aa19.42■□□□□ 0.7
PARVB-206ENST00000477438 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
PARVB-206ENST00000477438 ATAD2BQ9ULI0 1458 aa19.35■□□□□ 0.69
PARVB-206ENST00000477438 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
PARVB-206ENST00000477438 NCAPD3P42695 1498 aa19.29■□□□□ 0.68
PARVB-206ENST00000477438 HMGXB3Q12766 1538 aa19.29■□□□□ 0.68
PARVB-206ENST00000477438 PEG3Q9GZU2 1588 aa19.28■□□□□ 0.68
PARVB-206ENST00000477438 WIZO95785 1651 aa19.2■□□□□ 0.66
PARVB-206ENST00000477438 RSF1Q96T23 1441 aaPredicted RBP19.19■□□□□ 0.66
PARVB-206ENST00000477438 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
PARVB-206ENST00000477438 SUPT5HO00267 1087 aaKnown RBP18.93■□□□□ 0.62
PARVB-206ENST00000477438 ERCC6Q03468 1493 aa18.86■□□□□ 0.61
PARVB-206ENST00000477438 LAMC3Q9Y6N6 1575 aa18.85■□□□□ 0.61
PARVB-206ENST00000477438 NESP48681 1621 aa18.8■□□□□ 0.6
PARVB-206ENST00000477438 CADPSQ9ULU8 1353 aa18.78■□□□□ 0.6
PARVB-206ENST00000477438 CCDC88BA6NC98 1476 aa18.77■□□□□ 0.59
PARVB-206ENST00000477438 PDS5BQ9NTI5 1447 aa18.74■□□□□ 0.59
PARVB-206ENST00000477438 CFTRP13569 1480 aa18.68■□□□□ 0.58
PARVB-206ENST00000477438 KIF21AQ7Z4S6 1674 aa18.64■□□□□ 0.57
PARVB-206ENST00000477438 PRDM2Q13029 1718 aa18.64■□□□□ 0.57
PARVB-206ENST00000477438 CEP164Q9UPV0 1460 aa18.62■□□□□ 0.57
PARVB-206ENST00000477438 FANCD2Q9BXW9 1451 aa18.61■□□□□ 0.57
PARVB-206ENST00000477438 MRC2Q9UBG0 1479 aa18.53■□□□□ 0.56
PARVB-206ENST00000477438 THOC2Q8NI27 1593 aaKnown RBP18.52■□□□□ 0.56
PARVB-206ENST00000477438 CUX2O14529 1486 aa18.52■□□□□ 0.55
PARVB-206ENST00000477438 WDR62O43379 1518 aa18.43■□□□□ 0.54
PARVB-206ENST00000477438 ABCC8Q09428 1581 aa18.37■□□□□ 0.53
PARVB-206ENST00000477438 URB2Q14146 1524 aaKnown RBP18.35■□□□□ 0.53
PARVB-206ENST00000477438 DNMBPQ6XZF7 1577 aa18.33■□□□□ 0.52
PARVB-206ENST00000477438 TOPBP1Q92547 1522 aa18.3■□□□□ 0.52
PARVB-206ENST00000477438 IFT140Q96RY7 1462 aa18.2■□□□□ 0.5
PARVB-206ENST00000477438 CUX1P39880 1505 aa18.18■□□□□ 0.5
PARVB-206ENST00000477438 WRNQ14191 1432 aaPredicted RBP eCLIP18.18■□□□□ 0.5
PARVB-206ENST00000477438 POLA1P09884 1462 aaPredicted RBP18.14■□□□□ 0.5
PARVB-206ENST00000477438 FGD5Q6ZNL6 1462 aa18.14■□□□□ 0.5
PARVB-206ENST00000477438 TOP2BQ02880 1626 aa18.11■□□□□ 0.49
PARVB-206ENST00000477438 BIVM-ERCC5R4GMW8 1640 aa18.1■□□□□ 0.49
PARVB-206ENST00000477438 SOGA1O94964 1423 aa18.09■□□□□ 0.49
PARVB-206ENST00000477438 SYNJ1O43426 1573 aa18.08■□□□□ 0.49
PARVB-206ENST00000477438 TARBP1Q13395 1621 aaKnown RBP18.05■□□□□ 0.48
PARVB-206ENST00000477438 RAD54L2Q9Y4B4 1467 aa18.05■□□□□ 0.48
PARVB-206ENST00000477438 EIF4G3O43432 1585 aaKnown RBP18.04■□□□□ 0.48
PARVB-206ENST00000477438 WDR97A6NE52 1622 aa18.02■□□□□ 0.48
PARVB-206ENST00000477438 ZNF608Q9ULD9 1512 aaPredicted RBP18.02■□□□□ 0.47
PARVB-206ENST00000477438 ABCA10Q8WWZ4 1543 aa17.96■□□□□ 0.47
PARVB-206ENST00000477438 AQRO60306 1485 aaKnown RBP eCLIP17.95■□□□□ 0.46
PARVB-206ENST00000477438 TDRD9Q8NDG6 1382 aaKnown RBP17.95■□□□□ 0.46
PARVB-206ENST00000477438 GAPVD1Q14C86 1478 aa17.9■□□□□ 0.46
PARVB-206ENST00000477438 GRIN2BQ13224 1484 aa17.89■□□□□ 0.45
PARVB-206ENST00000477438 TRIM41Q8WV44 630 aa17.89■□□□□ 0.45
PARVB-206ENST00000477438 PBRM1Q86U86 1689 aa17.89■□□□□ 0.45
PARVB-206ENST00000477438 ABCA5Q8WWZ7 1642 aa17.88■□□□□ 0.45
PARVB-206ENST00000477438 SNAPC4Q5SXM2 1469 aa17.86■□□□□ 0.45
PARVB-206ENST00000477438 MAGI1Q96QZ7 1491 aaPredicted RBP17.84■□□□□ 0.45
PARVB-206ENST00000477438 FBLN2P98095 1184 aa17.84■□□□□ 0.45
PARVB-206ENST00000477438 KIF27Q86VH2 1401 aa17.82■□□□□ 0.44
PARVB-206ENST00000477438 CHMP7Q8WUX9 453 aaPredicted RBP17.78■□□□□ 0.44
PARVB-206ENST00000477438 CHD1O14646 1710 aa17.78■□□□□ 0.44
PARVB-206ENST00000477438 ERICH3Q5RHP9 1530 aa17.77■□□□□ 0.44
PARVB-206ENST00000477438 SYNJ2O15056 1496 aa17.75■□□□□ 0.43
PARVB-206ENST00000477438 OSCARQ8IYS5 282 aa17.75■□□□□ 0.43
PARVB-206ENST00000477438 ADAMTS12P58397 1594 aa17.74■□□□□ 0.43
PARVB-206ENST00000477438 FHAD1B1AJZ9 1412 aa17.71■□□□□ 0.43
PARVB-206ENST00000477438 CUL7Q14999 1698 aa17.7■□□□□ 0.42
PARVB-206ENST00000477438 DNAJC5Q9H3Z4 198 aa17.67■□□□□ 0.42
PARVB-206ENST00000477438 CHIC1Q5VXU3 224 aa17.65■□□□□ 0.42
PARVB-206ENST00000477438 GRIN2AQ12879 1464 aa17.64■□□□□ 0.41
PARVB-206ENST00000477438 IGF1RP08069 1367 aa17.6■□□□□ 0.41
PARVB-206ENST00000477438 EEA1Q15075 1411 aa17.59■□□□□ 0.41
PARVB-206ENST00000477438 CARMIL1Q5VZK9 1371 aa17.57■□□□□ 0.4
PARVB-206ENST00000477438 RUSC2Q8N2Y8 1516 aa17.55■□□□□ 0.4
PARVB-206ENST00000477438 CLASP1Q7Z460 1538 aa17.53■□□□□ 0.4
PARVB-206ENST00000477438 CEP170Q5SW79 1584 aa17.53■□□□□ 0.4
PARVB-206ENST00000477438 RAPGEF2Q9Y4G8 1499 aa17.52■□□□□ 0.4
PARVB-206ENST00000477438 NUP160Q12769 1436 aa17.51■□□□□ 0.39
PARVB-206ENST00000477438 FAM9AQ8IZU1 332 aaPredicted RBP17.5■□□□□ 0.39
PARVB-206ENST00000477438 CSRNP3Q8WYN3 585 aa17.47■□□□□ 0.39
PARVB-206ENST00000477438 ARHGEF11O15085 1522 aa17.46■□□□□ 0.39
PARVB-206ENST00000477438 RIMBP3CA6NJZ7 1639 aa17.45■□□□□ 0.38
PARVB-206ENST00000477438 RIMBP3BA6NNM3 1639 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms