RNA–Protein interactions for RNA: ENST00000477203.6

HDAC7-221, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 3,122 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-221ENST00000477203 TROQ12816 1431 aaPredicted RBP19.17■□□□□ 0.66
HDAC7-221ENST00000477203 HNRNPMP52272 730 aaKnown RBP eCLIP19.16■□□□□ 0.662e-6■■■□□ 16.7
HDAC7-221ENST00000477203 UACAQ9BZF9 1416 aa19.15■□□□□ 0.66
HDAC7-221ENST00000477203 MPHOSPH9Q99550 1183 aa19.15■□□□□ 0.66
HDAC7-221ENST00000477203 PPP1R15AO75807 674 aaPredicted RBP19.14■□□□□ 0.65
HDAC7-221ENST00000477203 ERCC6L2Q5T890 1561 aa19.14■□□□□ 0.65
HDAC7-221ENST00000477203 ATP10BO94823 1461 aa19.14■□□□□ 0.65
HDAC7-221ENST00000477203 DAPK1P53355 1430 aa19.13■□□□□ 0.65
HDAC7-221ENST00000477203 SLC4A1APQ9BWU0 796 aaKnown RBP19.13■□□□□ 0.65
HDAC7-221ENST00000477203 ABCC5O15440 1437 aa19.13■□□□□ 0.65
HDAC7-221ENST00000477203 MIA2Q96PC5 1412 aa19.12■□□□□ 0.65
HDAC7-221ENST00000477203 TCOF1Q13428 1488 aaKnown RBP19.1■□□□□ 0.65
HDAC7-221ENST00000477203 GPATCH8Q9UKJ3 1502 aaKnown RBP19.09■□□□□ 0.65
HDAC7-221ENST00000477203 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
HDAC7-221ENST00000477203 CAMSAP2Q08AD1 1489 aa19.07■□□□□ 0.64
HDAC7-221ENST00000477203 ZNF326Q5BKZ1 582 aaKnown RBP19.07■□□□□ 0.64
HDAC7-221ENST00000477203 ABCA8O94911 1581 aa19.03■□□□□ 0.64
HDAC7-221ENST00000477203 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
HDAC7-221ENST00000477203 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
HDAC7-221ENST00000477203 L3MBTL2Q969R5 705 aa19.01■□□□□ 0.63
HDAC7-221ENST00000477203 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19■□□□□ 0.63
HDAC7-221ENST00000477203 DENND4BO75064 1496 aaPredicted RBP19■□□□□ 0.63
HDAC7-221ENST00000477203 CNGB1Q14028 1251 aaPredicted RBP18.98■□□□□ 0.63
HDAC7-221ENST00000477203 DNMT1P26358 1616 aaKnown RBP18.98■□□□□ 0.63
HDAC7-221ENST00000477203 PKD2Q13563 968 aa18.97■□□□□ 0.63
HDAC7-221ENST00000477203 GCC2Q8IWJ2 1684 aa18.96■□□□□ 0.63
HDAC7-221ENST00000477203 AKNAQ7Z591 1439 aa18.96■□□□□ 0.63
HDAC7-221ENST00000477203 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
HDAC7-221ENST00000477203 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
HDAC7-221ENST00000477203 TIMELESSQ9UNS1 1208 aa18.94■□□□□ 0.62
HDAC7-221ENST00000477203 ANKRD30AQ9BXX3 1397 aa18.93■□□□□ 0.62
HDAC7-221ENST00000477203 POLR3GLQ9BT43 218 aa18.93■□□□□ 0.62
HDAC7-221ENST00000477203 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
HDAC7-221ENST00000477203 ITSN2Q9NZM3 1697 aa18.92■□□□□ 0.62
HDAC7-221ENST00000477203 NUP155O75694 1391 aa18.91■□□□□ 0.62
HDAC7-221ENST00000477203 ABCC10Q5T3U5 1492 aa18.91■□□□□ 0.62
HDAC7-221ENST00000477203 ROCK1Q13464 1354 aa18.91■□□□□ 0.62
HDAC7-221ENST00000477203 C9orf84Q5VXU9 1444 aa18.9■□□□□ 0.62
HDAC7-221ENST00000477203 KDM2AQ9Y2K7 1162 aa18.9■□□□□ 0.62
HDAC7-221ENST00000477203 ANKRD50Q9ULJ7 1429 aa18.89■□□□□ 0.61
HDAC7-221ENST00000477203 HSPA5P11021 654 aaKnown RBP18.89■□□□□ 0.61
HDAC7-221ENST00000477203 NBPF8Q3BBV2 869 aa18.89■□□□□ 0.61
HDAC7-221ENST00000477203 ARHGAP5Q13017 1502 aa18.87■□□□□ 0.61
HDAC7-221ENST00000477203 KIF15Q9NS87 1388 aa18.86■□□□□ 0.61
HDAC7-221ENST00000477203 ANKRD30BQ9BXX2 1392 aa18.85■□□□□ 0.61
HDAC7-221ENST00000477203 ADCY10Q96PN6 1610 aa18.85■□□□□ 0.61
HDAC7-221ENST00000477203 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.61
HDAC7-221ENST00000477203 RGL3Q3MIN7 710 aa18.83■□□□□ 0.6
HDAC7-221ENST00000477203 PZPP20742 1482 aa18.82■□□□□ 0.6
HDAC7-221ENST00000477203 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
HDAC7-221ENST00000477203 AFAP1Q8N556 730 aa18.81■□□□□ 0.6
HDAC7-221ENST00000477203 ABCC2Q92887 1545 aa18.81■□□□□ 0.6
HDAC7-221ENST00000477203 EIF4G2P78344 907 aaKnown RBP eCLIP18.8■□□□□ 0.65e-7■■□□□ 11.4
HDAC7-221ENST00000477203 CDC42BPBQ9Y5S2 1711 aa18.8■□□□□ 0.6
HDAC7-221ENST00000477203 SYCP2Q9BX26 1530 aa18.8■□□□□ 0.6
HDAC7-221ENST00000477203 KDM5BQ9UGL1 1544 aa18.79■□□□□ 0.6
HDAC7-221ENST00000477203 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.79■□□□□ 0.64e-6■■■□□ 19
HDAC7-221ENST00000477203 ANP32CO43423 234 aa18.79■□□□□ 0.6
HDAC7-221ENST00000477203 SAMD9LQ8IVG5 1584 aa18.79■□□□□ 0.6
HDAC7-221ENST00000477203 C11orf95C9JLR9 678 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-221ENST00000477203 OSCARQ8IYS5 282 aa18.76■□□□□ 0.59
HDAC7-221ENST00000477203 MBD5Q9P267 1494 aa18.76■□□□□ 0.59
HDAC7-221ENST00000477203 ADGBQ8N7X0 1667 aa18.76■□□□□ 0.59
HDAC7-221ENST00000477203 CLASP1Q7Z460 1538 aa18.76■□□□□ 0.59
HDAC7-221ENST00000477203 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
HDAC7-221ENST00000477203 WASHC2AQ641Q2 1341 aa18.75■□□□□ 0.59
HDAC7-221ENST00000477203 CROCC2H7BZ55 1655 aa18.75■□□□□ 0.59
HDAC7-221ENST00000477203 DCAF11Q8TEB1 546 aa18.74■□□□□ 0.59
HDAC7-221ENST00000477203 CCDC141Q6ZP82 1450 aa18.74■□□□□ 0.59
HDAC7-221ENST00000477203 RPRD2Q5VT52 1461 aaKnown RBP18.73■□□□□ 0.59
HDAC7-221ENST00000477203 ZCCHC11Q5TAX3 1644 aaKnown RBP18.73■□□□□ 0.59
HDAC7-221ENST00000477203 KIAA1107Q9UPP5 1409 aa18.73■□□□□ 0.59
HDAC7-221ENST00000477203 ADGRL2O95490 1459 aa18.72■□□□□ 0.59
HDAC7-221ENST00000477203 PREX2Q70Z35 1606 aa18.71■□□□□ 0.59
HDAC7-221ENST00000477203 ARHGEF12Q9NZN5 1544 aa18.69■□□□□ 0.58
HDAC7-221ENST00000477203 NPM1P06748 294 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC7-221ENST00000477203 ANP32EQ9BTT0 268 aa18.68■□□□□ 0.58
HDAC7-221ENST00000477203 PLEKHH2Q8IVE3 1493 aa18.68■□□□□ 0.58
HDAC7-221ENST00000477203 TRAPPC8Q9Y2L5 1435 aa18.68■□□□□ 0.58
HDAC7-221ENST00000477203 MYO5CQ9NQX4 1742 aa18.66■□□□□ 0.58
HDAC7-221ENST00000477203 TEX14Q8IWB6 1497 aa18.66■□□□□ 0.58
HDAC7-221ENST00000477203 SPAG9O60271 1321 aaKnown RBP18.66■□□□□ 0.58
HDAC7-221ENST00000477203 SENP3-EIF4A1A0A087X0R7 540 aa18.65■□□□□ 0.58
HDAC7-221ENST00000477203 RSPH4AQ5TD94 716 aa18.65■□□□□ 0.58
HDAC7-221ENST00000477203 PLCH2O75038 1416 aa18.63■□□□□ 0.57
HDAC7-221ENST00000477203 SHANK2Q9UPX8 1470 aa18.63■□□□□ 0.57
HDAC7-221ENST00000477203 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
HDAC7-221ENST00000477203 CYB5RLQ6IPT4 315 aa18.61■□□□□ 0.57
HDAC7-221ENST00000477203 ARHGEF5Q12774 1597 aa18.6■□□□□ 0.57
HDAC7-221ENST00000477203 PRKCSHP14314 528 aaPredicted RBP18.59■□□□□ 0.57
HDAC7-221ENST00000477203 CCDC184Q52MB2 194 aa18.59■□□□□ 0.57
HDAC7-221ENST00000477203 KIF3BO15066 747 aa18.59■□□□□ 0.57
HDAC7-221ENST00000477203 KIF7Q2M1P5 1343 aa18.58■□□□□ 0.57
HDAC7-221ENST00000477203 ASXL2Q76L83 1435 aa18.58■□□□□ 0.56
HDAC7-221ENST00000477203 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
HDAC7-221ENST00000477203 FAM135AQ9P2D6 1515 aa18.57■□□□□ 0.56
HDAC7-221ENST00000477203 SCAPERQ9BY12 1400 aa18.57■□□□□ 0.56
HDAC7-221ENST00000477203 USP47Q96K76 1375 aa18.56■□□□□ 0.56
HDAC7-221ENST00000477203 WDR7Q9Y4E6 1490 aa18.56■□□□□ 0.56
HDAC7-221ENST00000477203 NBPF1Q3BBV0 1214 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms