RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 GOLGA6L4A6NEF3 574 aa8.62□□□□□ -1.03
TTC3-215ENST00000476784 CCAR1Q8IX12 1150 aaKnown RBP8.62□□□□□ -1.03
TTC3-215ENST00000476784 APBB1O00213 710 aa8.62□□□□□ -1.03
TTC3-215ENST00000476784 RASSF8Q8NHQ8 419 aa8.62□□□□□ -1.03
TTC3-215ENST00000476784 CSRNP3Q8WYN3 585 aa8.62□□□□□ -1.03
TTC3-215ENST00000476784 TOMM22Q9NS69 142 aa8.61□□□□□ -1.03
TTC3-215ENST00000476784 WDR70Q9NW82 654 aa8.61□□□□□ -1.03
TTC3-215ENST00000476784 CFDP1Q9UEE9 299 aaPredicted RBP8.61□□□□□ -1.03
TTC3-215ENST00000476784 CREBRFQ8IUR6 639 aa8.6□□□□□ -1.03
TTC3-215ENST00000476784 CHAF1AQ13111 956 aaPredicted RBP8.6□□□□□ -1.03
TTC3-215ENST00000476784 IRX6P78412 446 aaPredicted RBP8.6□□□□□ -1.03
TTC3-215ENST00000476784 PAXIP1Q6ZW49 1069 aaPredicted RBP8.6□□□□□ -1.03
TTC3-215ENST00000476784 CDCA8Q53HL2 280 aa8.59□□□□□ -1.03
TTC3-215ENST00000476784 NGDNQ8NEJ9 315 aaKnown RBP8.59□□□□□ -1.03
TTC3-215ENST00000476784 CEP89Q96ST8 783 aa8.58□□□□□ -1.04
TTC3-215ENST00000476784 BECN1Q14457 450 aa8.57□□□□□ -1.04
TTC3-215ENST00000476784 VSIG10Q8N0Z9 540 aa8.57□□□□□ -1.04
TTC3-215ENST00000476784 KANK1Q14678 1352 aa8.56□□□□□ -1.04
TTC3-215ENST00000476784 A0A0U1RQG5 324 aaPredicted RBP8.56□□□□□ -1.04
TTC3-215ENST00000476784 GTF3C3Q9Y5Q9 886 aa8.56□□□□□ -1.04
TTC3-215ENST00000476784 CC2D1BQ5T0F9 858 aaKnown RBP8.56□□□□□ -1.04
TTC3-215ENST00000476784 NRDCO43847 1150 aa8.55□□□□□ -1.04
TTC3-215ENST00000476784 PAF1Q8N7H5 531 aa8.55□□□□□ -1.04
TTC3-215ENST00000476784 PIP4K2BP78356 416 aa8.55□□□□□ -1.04
TTC3-215ENST00000476784 PPM1FP49593 454 aaPredicted RBP8.55□□□□□ -1.04
TTC3-215ENST00000476784 NUTM2DQ5VT03 806 aaPredicted RBP8.55□□□□□ -1.04
TTC3-215ENST00000476784 HSP90B1P14625 803 aaKnown RBP8.55□□□□□ -1.04
TTC3-215ENST00000476784 CYB5RLQ6IPT4 315 aa8.54□□□□□ -1.04
TTC3-215ENST00000476784 NOL10Q9BSC4 688 aaKnown RBP8.54□□□□□ -1.04
TTC3-215ENST00000476784 DRC7Q8IY82 874 aa8.54□□□□□ -1.04
TTC3-215ENST00000476784 CARD11Q9BXL7 1154 aa8.54□□□□□ -1.04
TTC3-215ENST00000476784 NGEFQ8N5V2 710 aa8.53□□□□□ -1.04
TTC3-215ENST00000476784 L1TD1Q5T7N2 865 aaKnown RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 HDGFL2Q7Z4V5 671 aaPredicted RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 NUTM2BA6NNL0 878 aaPredicted RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 NUTM2EB1AL46 878 aaPredicted RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 HSP90AB1P08238 724 aaKnown RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 NUTM2AQ8IVF1 878 aaPredicted RBP8.53□□□□□ -1.04
TTC3-215ENST00000476784 IBSPP21815 317 aaPredicted RBP8.52□□□□□ -1.05
TTC3-215ENST00000476784 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
TTC3-215ENST00000476784 KIAA1211Q6ZU35 1233 aa8.52□□□□□ -1.05
TTC3-215ENST00000476784 SCRIBQ14160 1630 aa8.52□□□□□ -1.05
TTC3-215ENST00000476784 AMPHP49418 695 aa8.51□□□□□ -1.05
TTC3-215ENST00000476784 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.51□□□□□ -1.052e-6■■■■■ 48.4
TTC3-215ENST00000476784 DHX16O60231 1041 aaKnown RBP8.51□□□□□ -1.05
TTC3-215ENST00000476784 VPS37DQ86XT2 251 aa8.5□□□□□ -1.05
TTC3-215ENST00000476784 GLIPR1L2Q4G1C9 344 aa8.5□□□□□ -1.05
TTC3-215ENST00000476784 MCCP23508 829 aa8.5□□□□□ -1.05
TTC3-215ENST00000476784 DDRGK1Q96HY6 314 aa8.49□□□□□ -1.05
TTC3-215ENST00000476784 AMOTL1Q8IY63 956 aa8.49□□□□□ -1.05
TTC3-215ENST00000476784 MORC1Q86VD1 984 aa8.49□□□□□ -1.05
TTC3-215ENST00000476784 RBM33Q96EV2 1170 aaKnown RBP8.49□□□□□ -1.05
TTC3-215ENST00000476784 CCDC43Q96MW1 224 aaKnown RBP8.49□□□□□ -1.05
TTC3-215ENST00000476784 RGS3P49796 1198 aa8.48□□□□□ -1.05
TTC3-215ENST00000476784 PES1O00541 588 aaKnown RBP8.48□□□□□ -1.05
TTC3-215ENST00000476784 CHMP4BQ9H444 224 aaKnown RBP8.48□□□□□ -1.05
TTC3-215ENST00000476784 TMEM132AQ24JP5 1023 aa8.48□□□□□ -1.05
TTC3-215ENST00000476784 SPDYE4A6NLX3 237 aa8.47□□□□□ -1.05
TTC3-215ENST00000476784 R3HCC1Q9Y3T6 440 aaKnown RBP8.46□□□□□ -1.05
TTC3-215ENST00000476784 SPAG9O60271 1321 aaKnown RBP8.46□□□□□ -1.05
TTC3-215ENST00000476784 MYCNP04198 464 aaPredicted RBP8.46□□□□□ -1.05
TTC3-215ENST00000476784 USP35Q9P2H5 1018 aa8.46□□□□□ -1.05
TTC3-215ENST00000476784 SLC4A10Q6U841 1118 aa8.46□□□□□ -1.06
TTC3-215ENST00000476784 ATF3P18847 181 aa8.45□□□□□ -1.06
TTC3-215ENST00000476784 STK31Q9BXU1 1019 aa8.45□□□□□ -1.06
TTC3-215ENST00000476784 WWC2Q6AWC2 1192 aa8.45□□□□□ -1.06
TTC3-215ENST00000476784 C1orf141Q5JVX7 400 aa8.45□□□□□ -1.06
TTC3-215ENST00000476784 SPRYD3Q8NCJ5 442 aa8.45□□□□□ -1.06
TTC3-215ENST00000476784 GRM1Q13255 1194 aa8.44□□□□□ -1.06
TTC3-215ENST00000476784 GPATCH3Q96I76 525 aa8.44□□□□□ -1.06
TTC3-215ENST00000476784 IKQ13123 557 aaPredicted RBP8.44□□□□□ -1.06
TTC3-215ENST00000476784 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.44□□□□□ -1.062e-6■■■■□ 21.8
TTC3-215ENST00000476784 PPP4R2Q9NY27 417 aa8.43□□□□□ -1.06
TTC3-215ENST00000476784 DCAF11Q8TEB1 546 aa8.43□□□□□ -1.06
TTC3-215ENST00000476784 EIF4G1Q04637 1599 aaKnown RBP8.43□□□□□ -1.06
TTC3-215ENST00000476784 TRIM6-TRIM34B2RNG4 842 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 TTC5Q8N0Z6 440 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 PSME1Q06323 249 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 FAM177BA6PVY3 158 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 FYB1O15117 783 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 AKAP17AQ02040 695 aaKnown RBP8.42□□□□□ -1.06
TTC3-215ENST00000476784 PLCD3Q8N3E9 789 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 MTMR7Q9Y216 660 aa8.42□□□□□ -1.06
TTC3-215ENST00000476784 TMEM87AQ8NBN3 555 aa8.41□□□□□ -1.06
TTC3-215ENST00000476784 MS4A1P11836 297 aa8.41□□□□□ -1.06
TTC3-215ENST00000476784 CCDC34Q96HJ3 373 aa8.41□□□□□ -1.06
TTC3-215ENST00000476784 TMF1P82094 1093 aa8.4□□□□□ -1.06
TTC3-215ENST00000476784 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
TTC3-215ENST00000476784 CHMP4BP1P59074 171 aa8.4□□□□□ -1.07
TTC3-215ENST00000476784 WASHC2CQ9Y4E1 1318 aa8.39□□□□□ -1.07
TTC3-215ENST00000476784 TPD52L1Q16890 204 aaPredicted RBP8.39□□□□□ -1.07
TTC3-215ENST00000476784 U2AF1L5P0DN76 240 aaPredicted RBP8.39□□□□□ -1.07
TTC3-215ENST00000476784 U2AF1Q01081 240 aaKnown RBP eCLIP8.39□□□□□ -1.07
TTC3-215ENST00000476784 NOL8Q76FK4 1167 aaKnown RBP8.39□□□□□ -1.07
TTC3-215ENST00000476784 WASHC2AQ641Q2 1341 aa8.39□□□□□ -1.07
TTC3-215ENST00000476784 APPP05067 770 aa8.38□□□□□ -1.07
TTC3-215ENST00000476784 CCDC97Q96F63 343 aaPredicted RBP8.38□□□□□ -1.07
TTC3-215ENST00000476784 KIF3BO15066 747 aa8.38□□□□□ -1.07
TTC3-215ENST00000476784 TPM4P67936 248 aa8.37□□□□□ -1.07
TTC3-215ENST00000476784 B4GALNT3Q6L9W6 998 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms