RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
CCM2-208ENST00000476594 FRMPD1Q5SYB0 1578 aa16.26■□□□□ 0.19
CCM2-208ENST00000476594 RICTORQ6R327 1708 aa16.26■□□□□ 0.19
CCM2-208ENST00000476594 MAGI2Q86UL8 1455 aa16.26■□□□□ 0.19
CCM2-208ENST00000476594 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
CCM2-208ENST00000476594 POGZQ7Z3K3 1410 aa16.24■□□□□ 0.19
CCM2-208ENST00000476594 ARHGEF40Q8TER5 1519 aa16.24■□□□□ 0.19
CCM2-208ENST00000476594 PREX2Q70Z35 1606 aa16.23■□□□□ 0.19
CCM2-208ENST00000476594 ZNF518AQ6AHZ1 1483 aa16.22■□□□□ 0.19
CCM2-208ENST00000476594 ARID4BQ4LE39 1312 aaPredicted RBP16.22■□□□□ 0.19
CCM2-208ENST00000476594 ZFYVE16Q7Z3T8 1539 aa16.22■□□□□ 0.19
CCM2-208ENST00000476594 EHBP1L1Q8N3D4 1523 aa16.21■□□□□ 0.19
CCM2-208ENST00000476594 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
CCM2-208ENST00000476594 CCNB3Q8WWL7 1395 aa16.19■□□□□ 0.18
CCM2-208ENST00000476594 VPS8Q8N3P4 1428 aa16.19■□□□□ 0.18
CCM2-208ENST00000476594 MYT1LQ9UL68 1186 aa16.18■□□□□ 0.18
CCM2-208ENST00000476594 CDC42BPBQ9Y5S2 1711 aa16.18■□□□□ 0.18
CCM2-208ENST00000476594 CDC42BPAQ5VT25 1732 aa16.16■□□□□ 0.18
CCM2-208ENST00000476594 PLEKHH2Q8IVE3 1493 aa16.16■□□□□ 0.18
CCM2-208ENST00000476594 ABCC1P33527 1531 aa16.15■□□□□ 0.18
CCM2-208ENST00000476594 CFDP1Q9UEE9 299 aaPredicted RBP16.15■□□□□ 0.18
CCM2-208ENST00000476594 KDM5CP41229 1560 aa16.14■□□□□ 0.17
CCM2-208ENST00000476594 ZNF777Q9ULD5 760 aaPredicted RBP16.14■□□□□ 0.17
CCM2-208ENST00000476594 GPATCH8Q9UKJ3 1502 aaKnown RBP16.14■□□□□ 0.17
CCM2-208ENST00000476594 HECW2Q9P2P5 1572 aa16.13■□□□□ 0.17
CCM2-208ENST00000476594 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
CCM2-208ENST00000476594 YEATS2Q9ULM3 1422 aa16.13■□□□□ 0.17
CCM2-208ENST00000476594 ATP10AO60312 1499 aa16.13■□□□□ 0.17
CCM2-208ENST00000476594 ITSN2Q9NZM3 1697 aa16.13■□□□□ 0.17
CCM2-208ENST00000476594 BCORL1Q5H9F3 1711 aa16.12■□□□□ 0.17
CCM2-208ENST00000476594 TIAM1Q13009 1591 aa16.12■□□□□ 0.17
CCM2-208ENST00000476594 SUPT6HQ7KZ85 1726 aaKnown RBP16.11■□□□□ 0.17
CCM2-208ENST00000476594 APLP2Q06481 763 aa16.11■□□□□ 0.17
CCM2-208ENST00000476594 AFAP1Q8N556 730 aa16.11■□□□□ 0.17
CCM2-208ENST00000476594 ADAMTSL3P82987 1691 aa16.11■□□□□ 0.17
CCM2-208ENST00000476594 MLH3Q9UHC1 1453 aa16.1■□□□□ 0.17
CCM2-208ENST00000476594 KIAA1107Q9UPP5 1409 aa16.1■□□□□ 0.17
CCM2-208ENST00000476594 MAP3K1Q13233 1512 aa16.09■□□□□ 0.17
CCM2-208ENST00000476594 SYCP2Q9BX26 1530 aa16.08■□□□□ 0.16
CCM2-208ENST00000476594 SAMD9LQ8IVG5 1584 aa16.08■□□□□ 0.16
CCM2-208ENST00000476594 TRAPPC8Q9Y2L5 1435 aa16.07■□□□□ 0.16
CCM2-208ENST00000476594 PTPRMP28827 1452 aa16.07■□□□□ 0.16
CCM2-208ENST00000476594 MADDQ8WXG6 1647 aa16.06■□□□□ 0.16
CCM2-208ENST00000476594 NCOA2Q15596 1464 aa16.06■□□□□ 0.16
CCM2-208ENST00000476594 REREQ9P2R6 1566 aa16.05■□□□□ 0.16
CCM2-208ENST00000476594 ARHGEF12Q9NZN5 1544 aa16.05■□□□□ 0.16
CCM2-208ENST00000476594 LRRC9Q6ZRR7 1453 aa16.05■□□□□ 0.16
CCM2-208ENST00000476594 SPAG9O60271 1321 aaKnown RBP16.05■□□□□ 0.16
CCM2-208ENST00000476594 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
CCM2-208ENST00000476594 HNRNPMP52272 730 aaKnown RBP eCLIP16.03■□□□□ 0.16
CCM2-208ENST00000476594 MLECQ14165 292 aa16.03■□□□□ 0.16
CCM2-208ENST00000476594 RIMS1Q86UR5 1692 aaKnown RBP16.02■□□□□ 0.15
CCM2-208ENST00000476594 ABCA6Q8N139 1617 aa16.01■□□□□ 0.15
CCM2-208ENST00000476594 RSPH4AQ5TD94 716 aa16.01■□□□□ 0.15
CCM2-208ENST00000476594 ESF1Q9H501 851 aaKnown RBP16.01■□□□□ 0.15
CCM2-208ENST00000476594 AGLP35573 1532 aa16■□□□□ 0.15
CCM2-208ENST00000476594 ATP7AQ04656 1500 aa16■□□□□ 0.15
CCM2-208ENST00000476594 FER1L4A9Z1Z3 1794 aa16■□□□□ 0.15
CCM2-208ENST00000476594 KIDINS220Q9ULH0 1771 aa16■□□□□ 0.15
CCM2-208ENST00000476594 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
CCM2-208ENST00000476594 CCDC141Q6ZP82 1450 aa15.97■□□□□ 0.15
CCM2-208ENST00000476594 SIGLEC1Q9BZZ2 1709 aa15.97■□□□□ 0.15
CCM2-208ENST00000476594 INO80Q9ULG1 1556 aaPredicted RBP15.96■□□□□ 0.15
CCM2-208ENST00000476594 RTEL1-TNFRSF6BF6WH68 1400 aa15.95■□□□□ 0.14
CCM2-208ENST00000476594 ZNF644Q9H582 1327 aaPredicted RBP15.94■□□□□ 0.14
CCM2-208ENST00000476594 MIA2Q96PC5 1412 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 TSPY4P0CV99 314 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 TSPY10P0CW01 314 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 MBD5Q9P267 1494 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 MYOM3Q5VTT5 1437 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 CNTLNQ9NXG0 1405 aa15.94■□□□□ 0.14
CCM2-208ENST00000476594 A2MP01023 1474 aa15.93■□□□□ 0.14
CCM2-208ENST00000476594 ADGBQ8N7X0 1667 aa15.92■□□□□ 0.14
CCM2-208ENST00000476594 KANK4Q5T7N3 995 aaPredicted RBP15.92■□□□□ 0.14
CCM2-208ENST00000476594 PLPPR3Q6T4P5 718 aa15.92■□□□□ 0.14
CCM2-208ENST00000476594 ARHGEF5Q12774 1597 aa15.92■□□□□ 0.14
CCM2-208ENST00000476594 FOXD1Q16676 465 aa15.91■□□□□ 0.14
CCM2-208ENST00000476594 PLXNC1O60486 1568 aa15.89■□□□□ 0.13
CCM2-208ENST00000476594 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
CCM2-208ENST00000476594 DHX29Q7Z478 1369 aaKnown RBP15.87■□□□□ 0.13
CCM2-208ENST00000476594 LMTK3Q96Q04 1460 aa15.85■□□□□ 0.13
CCM2-208ENST00000476594 GGT6Q6P531 493 aa15.84■□□□□ 0.13
CCM2-208ENST00000476594 UHRF1BP1Q6BDS2 1440 aa15.84■□□□□ 0.13
CCM2-208ENST00000476594 MROH2AA6NES4 1674 aa15.83■□□□□ 0.13
CCM2-208ENST00000476594 PREX1Q8TCU6 1659 aa15.83■□□□□ 0.13
CCM2-208ENST00000476594 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.12
CCM2-208ENST00000476594 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
CCM2-208ENST00000476594 CEBPAP49715 358 aaPredicted RBP15.82■□□□□ 0.12
CCM2-208ENST00000476594 FAM135AQ9P2D6 1515 aa15.82■□□□□ 0.12
CCM2-208ENST00000476594 PTPN23Q9H3S7 1636 aa15.82■□□□□ 0.12
CCM2-208ENST00000476594 C3P01024 1663 aa15.81■□□□□ 0.12
CCM2-208ENST00000476594 FGD6Q6ZV73 1430 aa15.81■□□□□ 0.12
CCM2-208ENST00000476594 KIF3BO15066 747 aa15.8■□□□□ 0.12
CCM2-208ENST00000476594 SHANK2Q9UPX8 1470 aa15.79■□□□□ 0.12
CCM2-208ENST00000476594 NPATQ14207 1427 aa15.79■□□□□ 0.12
CCM2-208ENST00000476594 ZMYM3Q14202 1370 aa15.78■□□□□ 0.12
CCM2-208ENST00000476594 TCOF1Q13428 1488 aaKnown RBP15.78■□□□□ 0.12
CCM2-208ENST00000476594 CLTCQ00610 1675 aaKnown RBP15.77■□□□□ 0.12
CCM2-208ENST00000476594 EIF2AK4Q9P2K8 1649 aaKnown RBP15.76■□□□□ 0.11
CCM2-208ENST00000476594 KDM5DQ9BY66 1539 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms