RNA–Protein interactions for RNA: ENST00000476317.2

SIPA1L3-202, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 608 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-202ENST00000476317 RIMS1Q86UR5 1692 aaKnown RBP30.91■■■□□ 2.54
SIPA1L3-202ENST00000476317 SCAPERQ9BY12 1400 aa30.9■■■□□ 2.54
SIPA1L3-202ENST00000476317 PCF11O94913 1555 aaKnown RBP30.9■■■□□ 2.54
SIPA1L3-202ENST00000476317 ILDR1Q86SU0 546 aaPredicted RBP30.89■■■□□ 2.54
SIPA1L3-202ENST00000476317 TROQ12816 1431 aaPredicted RBP30.89■■■□□ 2.53
SIPA1L3-202ENST00000476317 MAGI2Q86UL8 1455 aa30.85■■■□□ 2.53
SIPA1L3-202ENST00000476317 CDK11AQ9UQ88 783 aaPredicted RBP30.83■■■□□ 2.53
SIPA1L3-202ENST00000476317 ARHGAP5Q13017 1502 aa30.8■■■□□ 2.52
SIPA1L3-202ENST00000476317 CASKIN1Q8WXD9 1431 aa30.8■■■□□ 2.52
SIPA1L3-202ENST00000476317 CLIP1P30622 1438 aa30.79■■■□□ 2.52
SIPA1L3-202ENST00000476317 EFCAB2Q5VUJ9 269 aa30.78■■■□□ 2.52
SIPA1L3-202ENST00000476317 CDC42BPBQ9Y5S2 1711 aa30.78■■■□□ 2.52
SIPA1L3-202ENST00000476317 LMTK3Q96Q04 1460 aa30.77■■■□□ 2.52
SIPA1L3-202ENST00000476317 CCDC18Q5T9S5 1454 aa30.74■■■□□ 2.51
SIPA1L3-202ENST00000476317 KDM5CP41229 1560 aa30.73■■■□□ 2.51
SIPA1L3-202ENST00000476317 FER1L4A9Z1Z3 1794 aa30.73■■■□□ 2.51
SIPA1L3-202ENST00000476317 PREX2Q70Z35 1606 aa30.73■■■□□ 2.51
SIPA1L3-202ENST00000476317 ATP10AO60312 1499 aa30.71■■■□□ 2.51
SIPA1L3-202ENST00000476317 ZNF518AQ6AHZ1 1483 aa30.71■■■□□ 2.51
SIPA1L3-202ENST00000476317 MLECQ14165 292 aa30.71■■■□□ 2.51
SIPA1L3-202ENST00000476317 C9orf84Q5VXU9 1444 aa30.7■■■□□ 2.5
SIPA1L3-202ENST00000476317 PLPPR3Q6T4P5 718 aa30.69■■■□□ 2.5
SIPA1L3-202ENST00000476317 FYCO1Q9BQS8 1478 aa30.69■■■□□ 2.5
SIPA1L3-202ENST00000476317 AFAP1Q8N556 730 aa30.68■■■□□ 2.5
SIPA1L3-202ENST00000476317 ARHGEF12Q9NZN5 1544 aa30.66■■■□□ 2.5
SIPA1L3-202ENST00000476317 CDC42BPAQ5VT25 1732 aa30.65■■■□□ 2.5
SIPA1L3-202ENST00000476317 ABCC1P33527 1531 aa30.65■■■□□ 2.5
SIPA1L3-202ENST00000476317 DIP2CQ9Y2E4 1556 aa30.64■■■□□ 2.5
SIPA1L3-202ENST00000476317 ABCA6Q8N139 1617 aa30.62■■■□□ 2.49
SIPA1L3-202ENST00000476317 ITSN2Q9NZM3 1697 aa30.62■■■□□ 2.49
SIPA1L3-202ENST00000476317 TRAPPC8Q9Y2L5 1435 aa30.6■■■□□ 2.49
SIPA1L3-202ENST00000476317 HSPA2P54652 639 aa30.57■■■□□ 2.48
SIPA1L3-202ENST00000476317 MLH3Q9UHC1 1453 aa30.55■■■□□ 2.48
SIPA1L3-202ENST00000476317 REREQ9P2R6 1566 aa30.54■■■□□ 2.48
SIPA1L3-202ENST00000476317 SAMD9LQ8IVG5 1584 aa30.52■■■□□ 2.48
SIPA1L3-202ENST00000476317 MYT1LQ9UL68 1186 aa30.51■■■□□ 2.47
SIPA1L3-202ENST00000476317 KIDINS220Q9ULH0 1771 aa30.51■■■□□ 2.47
SIPA1L3-202ENST00000476317 CEBPAP49715 358 aaPredicted RBP30.48■■■□□ 2.47
SIPA1L3-202ENST00000476317 GPATCH8Q9UKJ3 1502 aaKnown RBP30.47■■■□□ 2.47
SIPA1L3-202ENST00000476317 SYCP2Q9BX26 1530 aa30.46■■■□□ 2.47
SIPA1L3-202ENST00000476317 PREX1Q8TCU6 1659 aa30.46■■■□□ 2.47
SIPA1L3-202ENST00000476317 ZNF777Q9ULD5 760 aaPredicted RBP30.42■■■□□ 2.46
SIPA1L3-202ENST00000476317 AGLP35573 1532 aa30.42■■■□□ 2.46
SIPA1L3-202ENST00000476317 C3P01024 1663 aa30.39■■■□□ 2.45
SIPA1L3-202ENST00000476317 FBXO41Q8TF61 875 aa30.37■■■□□ 2.45
SIPA1L3-202ENST00000476317 CEP162Q5TB80 1403 aa30.34■■■□□ 2.45
SIPA1L3-202ENST00000476317 HNRNPMP52272 730 aaKnown RBP eCLIP30.34■■■□□ 2.45
SIPA1L3-202ENST00000476317 MTUS2Q5JR59 1369 aa30.33■■■□□ 2.45
SIPA1L3-202ENST00000476317 TIAM1Q13009 1591 aa30.32■■■□□ 2.45
SIPA1L3-202ENST00000476317 INO80Q9ULG1 1556 aaPredicted RBP30.32■■■□□ 2.44
SIPA1L3-202ENST00000476317 CCNB3Q8WWL7 1395 aa30.31■■■□□ 2.44
SIPA1L3-202ENST00000476317 ATP7AQ04656 1500 aa30.3■■■□□ 2.44
SIPA1L3-202ENST00000476317 EHBP1L1Q8N3D4 1523 aa30.29■■■□□ 2.44
SIPA1L3-202ENST00000476317 CFDP1Q9UEE9 299 aaPredicted RBP30.29■■■□□ 2.44
SIPA1L3-202ENST00000476317 KIAA1107Q9UPP5 1409 aa30.29■■■□□ 2.44
SIPA1L3-202ENST00000476317 STRCQ7RTU9 1775 aa30.28■■■□□ 2.44
SIPA1L3-202ENST00000476317 SUPT6HQ7KZ85 1726 aaKnown RBP30.28■■■□□ 2.44
SIPA1L3-202ENST00000476317 SPAG9O60271 1321 aaKnown RBP30.27■■■□□ 2.44
SIPA1L3-202ENST00000476317 UHRF1BP1Q6BDS2 1440 aa30.27■■■□□ 2.44
SIPA1L3-202ENST00000476317 PLEKHH2Q8IVE3 1493 aa30.25■■■□□ 2.43
SIPA1L3-202ENST00000476317 PLXNC1O60486 1568 aa30.25■■■□□ 2.43
SIPA1L3-202ENST00000476317 ZNF644Q9H582 1327 aaPredicted RBP30.23■■■□□ 2.43
SIPA1L3-202ENST00000476317 SETD1BQ9UPS6 1966 aaKnown RBP30.2■■■□□ 2.43
SIPA1L3-202ENST00000476317 ESF1Q9H501 851 aaKnown RBP30.19■■■□□ 2.42
SIPA1L3-202ENST00000476317 MROH2AA6NES4 1674 aa30.19■■■□□ 2.42
SIPA1L3-202ENST00000476317 CNTLNQ9NXG0 1405 aa30.18■■■□□ 2.42
SIPA1L3-202ENST00000476317 A2MP01023 1474 aa30.18■■■□□ 2.42
SIPA1L3-202ENST00000476317 MBD5Q9P267 1494 aa30.18■■■□□ 2.42
SIPA1L3-202ENST00000476317 CLTCQ00610 1675 aaKnown RBP30.16■■■□□ 2.42
SIPA1L3-202ENST00000476317 ADGBQ8N7X0 1667 aa30.13■■■□□ 2.41
SIPA1L3-202ENST00000476317 CERKQ8TCT0 537 aa30.11■■■□□ 2.41
SIPA1L3-202ENST00000476317 NCOA2Q15596 1464 aa30.11■■■□□ 2.41
SIPA1L3-202ENST00000476317 ZMYM3Q14202 1370 aa30.09■■■□□ 2.41
SIPA1L3-202ENST00000476317 NPATQ14207 1427 aa30.06■■■□□ 2.4
SIPA1L3-202ENST00000476317 LOC105371045A0A1W2PR82 267 aa30.06■■■□□ 2.4
SIPA1L3-202ENST00000476317 CAMSAP2Q08AD1 1489 aa30.06■■■□□ 2.4
SIPA1L3-202ENST00000476317 GGT6Q6P531 493 aa30.02■■■□□ 2.4
SIPA1L3-202ENST00000476317 MYO3AQ8NEV4 1616 aa30.02■■■□□ 2.4
SIPA1L3-202ENST00000476317 NCOA1Q15788 1441 aa30.02■■■□□ 2.4
SIPA1L3-202ENST00000476317 RTEL1-TNFRSF6BF6WH68 1400 aa30.01■■■□□ 2.39
SIPA1L3-202ENST00000476317 CAMSAP1Q5T5Y3 1602 aa30■■■□□ 2.39
SIPA1L3-202ENST00000476317 CCDC141Q6ZP82 1450 aa30■■■□□ 2.39
SIPA1L3-202ENST00000476317 VPS8Q8N3P4 1428 aa30■■■□□ 2.39
SIPA1L3-202ENST00000476317 DMRT2Q9Y5R5 561 aa30■■■□□ 2.39
SIPA1L3-202ENST00000476317 PTPRTO14522 1441 aa29.99■■■□□ 2.39
SIPA1L3-202ENST00000476317 PTPRKQ15262 1439 aa29.98■■■□□ 2.39
SIPA1L3-202ENST00000476317 ZNF142P52746 1687 aaPredicted RBP29.98■■■□□ 2.39
SIPA1L3-202ENST00000476317 LRRC9Q6ZRR7 1453 aa29.96■■■□□ 2.39
SIPA1L3-202ENST00000476317 DHX29Q7Z478 1369 aaKnown RBP29.95■■■□□ 2.39
SIPA1L3-202ENST00000476317 CEP170BQ9Y4F5 1589 aaPredicted RBP29.93■■■□□ 2.38
SIPA1L3-202ENST00000476317 ARHGEF5Q12774 1597 aa29.91■■■□□ 2.38
SIPA1L3-202ENST00000476317 LTBP4Q8N2S1 1624 aa29.91■■■□□ 2.38
SIPA1L3-202ENST00000476317 KANK4Q5T7N3 995 aaPredicted RBP29.87■■■□□ 2.37
SIPA1L3-202ENST00000476317 PPP6R1Q9UPN7 881 aa29.86■■■□□ 2.37
SIPA1L3-202ENST00000476317 NCKAP5LQ9HCH0 1330 aa29.86■■■□□ 2.37
SIPA1L3-202ENST00000476317 KIF3BO15066 747 aa29.84■■■□□ 2.37
SIPA1L3-202ENST00000476317 KDM5DQ9BY66 1539 aa29.84■■■□□ 2.37
SIPA1L3-202ENST00000476317 PLA2R1Q13018 1463 aa29.82■■■□□ 2.36
SIPA1L3-202ENST00000476317 MAP3K1Q13233 1512 aa29.81■■■□□ 2.36
SIPA1L3-202ENST00000476317 TCOF1Q13428 1488 aaKnown RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms