RNA–Protein interactions for RNA: ENST00000476317.2

SIPA1L3-202, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 608 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-202ENST00000476317 NISCHQ9Y2I1 1504 aa47.23■■■■■ 5.15
SIPA1L3-202ENST00000476317 CCDC180Q9P1Z9 1646 aa42.35■■■■■ 4.37
SIPA1L3-202ENST00000476317 ABCC9O60706 1549 aa42.32■■■■■ 4.37
SIPA1L3-202ENST00000476317 RB1CC1Q8TDY2 1594 aa40.25■■■■■ 4.03
SIPA1L3-202ENST00000476317 NACADO15069 1562 aa39.97■■■■□ 3.99
SIPA1L3-202ENST00000476317 DCAF8L2P0C7V8 631 aa39.75■■■■□ 3.95
SIPA1L3-202ENST00000476317 DNAJC5BQ9UF47 199 aa39.67■■■■□ 3.94
SIPA1L3-202ENST00000476317 UNC13AQ9UPW8 1703 aa39.48■■■■□ 3.91
SIPA1L3-202ENST00000476317 MYO15BQ96JP2 1530 aa39.43■■■■□ 3.9
SIPA1L3-202ENST00000476317 PABPN1Q86U42 306 aaKnown RBP eCLIP39.39■■■■□ 3.9
SIPA1L3-202ENST00000476317 BICRAQ9NZM4 1560 aa39.19■■■■□ 3.86
SIPA1L3-202ENST00000476317 ZCCHC6Q5VYS8 1495 aaKnown RBP39.18■■■■□ 3.86
SIPA1L3-202ENST00000476317 DCAF1Q9Y4B6 1507 aa38.97■■■■□ 3.83
SIPA1L3-202ENST00000476317 SCRIBQ14160 1630 aa38.67■■■■□ 3.78
SIPA1L3-202ENST00000476317 SHROOM4Q9ULL8 1493 aa38.51■■■■□ 3.76
SIPA1L3-202ENST00000476317 CC2D2AQ9P2K1 1620 aa38.25■■■■□ 3.71
SIPA1L3-202ENST00000476317 EIF4G1Q04637 1599 aaKnown RBP38.18■■■■□ 3.7
SIPA1L3-202ENST00000476317 CECR2Q9BXF3 1484 aa38.08■■■■□ 3.69
SIPA1L3-202ENST00000476317 NCAPD3P42695 1498 aa36.91■■■■□ 3.5
SIPA1L3-202ENST00000476317 SMARCA4P51532 1647 aa36.86■■■■□ 3.49
SIPA1L3-202ENST00000476317 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
SIPA1L3-202ENST00000476317 SMARCA2P51531 1590 aa36.7■■■■□ 3.47
SIPA1L3-202ENST00000476317 HMGXB3Q12766 1538 aa36.68■■■■□ 3.46
SIPA1L3-202ENST00000476317 BAZ1AQ9NRL2 1556 aaPredicted RBP36.62■■■■□ 3.45
SIPA1L3-202ENST00000476317 BAZ1BQ9UIG0 1483 aaKnown RBP36.48■■■■□ 3.43
SIPA1L3-202ENST00000476317 PEG3Q9GZU2 1588 aa36.48■■■■□ 3.43
SIPA1L3-202ENST00000476317 ERCC6Q03468 1493 aa36.47■■■■□ 3.43
SIPA1L3-202ENST00000476317 MROH2BQ7Z745 1585 aa36.44■■■■□ 3.42
SIPA1L3-202ENST00000476317 NESP48681 1621 aa36.42■■■■□ 3.42
SIPA1L3-202ENST00000476317 CUX2O14529 1486 aa36.37■■■■□ 3.41
SIPA1L3-202ENST00000476317 DNAJC5Q9H3Z4 198 aa36.26■■■■□ 3.4
SIPA1L3-202ENST00000476317 LAMC3Q9Y6N6 1575 aa36.09■■■■□ 3.37
SIPA1L3-202ENST00000476317 THOC2Q8NI27 1593 aaKnown RBP36.04■■■■□ 3.36
SIPA1L3-202ENST00000476317 WIZO95785 1651 aa36.03■■■■□ 3.36
SIPA1L3-202ENST00000476317 KIF21AQ7Z4S6 1674 aa35.97■■■■□ 3.35
SIPA1L3-202ENST00000476317 PDS5BQ9NTI5 1447 aa35.82■■■■□ 3.32
SIPA1L3-202ENST00000476317 CADPSQ9ULU8 1353 aa35.78■■■■□ 3.32
SIPA1L3-202ENST00000476317 RSF1Q96T23 1441 aaPredicted RBP35.66■■■■□ 3.3
SIPA1L3-202ENST00000476317 MRC2Q9UBG0 1479 aa35.57■■■■□ 3.28
SIPA1L3-202ENST00000476317 TOP2AP11388 1531 aaKnown RBP35.52■■■■□ 3.28
SIPA1L3-202ENST00000476317 WDR62O43379 1518 aa35.52■■■■□ 3.28
SIPA1L3-202ENST00000476317 CEP164Q9UPV0 1460 aa35.44■■■■□ 3.26
SIPA1L3-202ENST00000476317 CFTRP13569 1480 aa35.41■■■■□ 3.26
SIPA1L3-202ENST00000476317 FANCD2Q9BXW9 1451 aa35.41■■■■□ 3.26
SIPA1L3-202ENST00000476317 URB2Q14146 1524 aaKnown RBP35.17■■■■□ 3.22
SIPA1L3-202ENST00000476317 PRDM2Q13029 1718 aa35.13■■■■□ 3.21
SIPA1L3-202ENST00000476317 CCDC88BA6NC98 1476 aa35.12■■■■□ 3.21
SIPA1L3-202ENST00000476317 TOPBP1Q92547 1522 aa34.77■■■■□ 3.16
SIPA1L3-202ENST00000476317 ZNF608Q9ULD9 1512 aaPredicted RBP34.75■■■■□ 3.15
SIPA1L3-202ENST00000476317 TRIM41Q8WV44 630 aa34.74■■■■□ 3.15
SIPA1L3-202ENST00000476317 IFT140Q96RY7 1462 aa34.7■■■■□ 3.15
SIPA1L3-202ENST00000476317 OSCARQ8IYS5 282 aa34.66■■■■□ 3.14
SIPA1L3-202ENST00000476317 DNMBPQ6XZF7 1577 aa34.65■■■■□ 3.14
SIPA1L3-202ENST00000476317 ABCC8Q09428 1581 aa34.58■■■■□ 3.13
SIPA1L3-202ENST00000476317 EIF4G3O43432 1585 aaKnown RBP34.56■■■■□ 3.12
SIPA1L3-202ENST00000476317 TARBP1Q13395 1621 aaKnown RBP34.5■■■■□ 3.11
SIPA1L3-202ENST00000476317 POLA1P09884 1462 aaPredicted RBP34.43■■■■□ 3.1
SIPA1L3-202ENST00000476317 AQRO60306 1485 aaKnown RBP eCLIP34.39■■■■□ 3.1
SIPA1L3-202ENST00000476317 RIMBP3CA6NJZ7 1639 aa34.37■■■■□ 3.09
SIPA1L3-202ENST00000476317 RIMBP3BA6NNM3 1639 aa34.37■■■■□ 3.09
SIPA1L3-202ENST00000476317 RIMBP3Q9UFD9 1639 aa34.37■■■■□ 3.09
SIPA1L3-202ENST00000476317 RAD54L2Q9Y4B4 1467 aa34.33■■■■□ 3.09
SIPA1L3-202ENST00000476317 CHD1O14646 1710 aa34.3■■■■□ 3.08
SIPA1L3-202ENST00000476317 ARHGEF11O15085 1522 aa34.24■■■■□ 3.07
SIPA1L3-202ENST00000476317 CUX1P39880 1505 aa34.24■■■■□ 3.07
SIPA1L3-202ENST00000476317 FGD5Q6ZNL6 1462 aa34.22■■■■□ 3.07
SIPA1L3-202ENST00000476317 SOGA1O94964 1423 aa34.21■■■■□ 3.07
SIPA1L3-202ENST00000476317 TDRD9Q8NDG6 1382 aaKnown RBP34.17■■■■□ 3.06
SIPA1L3-202ENST00000476317 SUPT5HO00267 1087 aaKnown RBP34.09■■■■□ 3.05
SIPA1L3-202ENST00000476317 FBLN2P98095 1184 aa34.07■■■■□ 3.04
SIPA1L3-202ENST00000476317 SNAPC4Q5SXM2 1469 aa34.06■■■■□ 3.04
SIPA1L3-202ENST00000476317 WDR97A6NE52 1622 aa34.05■■■■□ 3.04
SIPA1L3-202ENST00000476317 ARAP1Q96P48 1450 aa33.93■■■■□ 3.02
SIPA1L3-202ENST00000476317 GRIN2BQ13224 1484 aa33.91■■■■□ 3.02
SIPA1L3-202ENST00000476317 MAGI1Q96QZ7 1491 aaPredicted RBP33.9■■■■□ 3.02
SIPA1L3-202ENST00000476317 CYB5RLQ6IPT4 315 aa33.9■■■■□ 3.02
SIPA1L3-202ENST00000476317 PBRM1Q86U86 1689 aa33.89■■■■□ 3.02
SIPA1L3-202ENST00000476317 CLASP1Q7Z460 1538 aa33.89■■■■□ 3.02
SIPA1L3-202ENST00000476317 ABCA5Q8WWZ7 1642 aa33.82■■■■□ 3
SIPA1L3-202ENST00000476317 GAPVD1Q14C86 1478 aa33.82■■■■□ 3
SIPA1L3-202ENST00000476317 ABCA10Q8WWZ4 1543 aa33.81■■■■□ 3
SIPA1L3-202ENST00000476317 SYNJ2O15056 1496 aa33.81■■■■□ 3
SIPA1L3-202ENST00000476317 CHMP7Q8WUX9 453 aaPredicted RBP33.8■■■■□ 3
SIPA1L3-202ENST00000476317 SYNJ1O43426 1573 aa33.8■■■■□ 3
SIPA1L3-202ENST00000476317 BIVM-ERCC5R4GMW8 1640 aa33.7■■■□□ 2.99
SIPA1L3-202ENST00000476317 TOP2BQ02880 1626 aa33.67■■■□□ 2.98
SIPA1L3-202ENST00000476317 WRNQ14191 1432 aaPredicted RBP eCLIP33.63■■■□□ 2.97
SIPA1L3-202ENST00000476317 ADAMTS12P58397 1594 aa33.55■■■□□ 2.96
SIPA1L3-202ENST00000476317 GRIN2AQ12879 1464 aa33.51■■■□□ 2.96
SIPA1L3-202ENST00000476317 TRHP20396 242 aaPredicted RBP33.47■■■□□ 2.95
SIPA1L3-202ENST00000476317 CEP170Q5SW79 1584 aa33.45■■■□□ 2.95
SIPA1L3-202ENST00000476317 ERCC6L2Q5T890 1561 aa33.43■■■□□ 2.94
SIPA1L3-202ENST00000476317 NUP160Q12769 1436 aa33.39■■■□□ 2.94
SIPA1L3-202ENST00000476317 ERICH3Q5RHP9 1530 aa33.37■■■□□ 2.93
SIPA1L3-202ENST00000476317 FHAD1B1AJZ9 1412 aa33.36■■■□□ 2.93
SIPA1L3-202ENST00000476317 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
SIPA1L3-202ENST00000476317 RUSC2Q8N2Y8 1516 aa33.09■■■□□ 2.89
SIPA1L3-202ENST00000476317 PRG4Q92954 1404 aaPredicted RBP33.04■■■□□ 2.88
SIPA1L3-202ENST00000476317 JPH4Q96JJ6 628 aa32.98■■■□□ 2.87
SIPA1L3-202ENST00000476317 IGF1RP08069 1367 aa32.96■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms