RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 DAPK1P53355 1430 aa17.73■□□□□ 0.43
RNF220-211ENST00000474956 GCC2Q8IWJ2 1684 aa17.73■□□□□ 0.43
RNF220-211ENST00000474956 MPHOSPH9Q99550 1183 aa17.71■□□□□ 0.43
RNF220-211ENST00000474956 KDM5BQ9UGL1 1544 aa17.71■□□□□ 0.43
RNF220-211ENST00000474956 CFDP1Q9UEE9 299 aaPredicted RBP17.7■□□□□ 0.42
RNF220-211ENST00000474956 TROQ12816 1431 aaPredicted RBP17.7■□□□□ 0.42
RNF220-211ENST00000474956 SUPT16HQ9Y5B9 1047 aaKnown RBP17.7■□□□□ 0.42
RNF220-211ENST00000474956 CDK11AQ9UQ88 783 aaPredicted RBP17.69■□□□□ 0.42
RNF220-211ENST00000474956 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
RNF220-211ENST00000474956 GPATCH8Q9UKJ3 1502 aaKnown RBP17.67■□□□□ 0.42
RNF220-211ENST00000474956 DNMT1P26358 1616 aaKnown RBP17.66■□□□□ 0.42
RNF220-211ENST00000474956 CAMSAP2Q08AD1 1489 aa17.66■□□□□ 0.42
RNF220-211ENST00000474956 TIMELESSQ9UNS1 1208 aa17.65■□□□□ 0.42
RNF220-211ENST00000474956 ATP10BO94823 1461 aa17.65■□□□□ 0.42
RNF220-211ENST00000474956 CHD1O14646 1710 aa17.63■□□□□ 0.41
RNF220-211ENST00000474956 ABCA8O94911 1581 aa17.62■□□□□ 0.41
RNF220-211ENST00000474956 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
RNF220-211ENST00000474956 L3MBTL2Q969R5 705 aa17.61■□□□□ 0.41
RNF220-211ENST00000474956 AKNAQ7Z591 1439 aa17.61■□□□□ 0.41
RNF220-211ENST00000474956 PLEKHD1A6NEE1 506 aa17.6■□□□□ 0.41
RNF220-211ENST00000474956 SLC4A1APQ9BWU0 796 aaKnown RBP17.6■□□□□ 0.41
RNF220-211ENST00000474956 PTPRGP23470 1445 aa17.58■□□□□ 0.4
RNF220-211ENST00000474956 CDC42BPAQ5VT25 1732 aa17.57■□□□□ 0.4
RNF220-211ENST00000474956 ROCK1Q13464 1354 aa17.57■□□□□ 0.4
RNF220-211ENST00000474956 HNRNPMP52272 730 aaKnown RBP eCLIP17.57■□□□□ 0.4
RNF220-211ENST00000474956 NCOA1Q15788 1441 aa17.56■□□□□ 0.4
RNF220-211ENST00000474956 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
RNF220-211ENST00000474956 NBPF8Q3BBV2 869 aa17.55■□□□□ 0.4
RNF220-211ENST00000474956 HSPA5P11021 654 aaKnown RBP17.55■□□□□ 0.4
RNF220-211ENST00000474956 ANKRD30BQ9BXX2 1392 aa17.54■□□□□ 0.4
RNF220-211ENST00000474956 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
RNF220-211ENST00000474956 ABCC10Q5T3U5 1492 aa17.54■□□□□ 0.4
RNF220-211ENST00000474956 PZPP20742 1482 aa17.52■□□□□ 0.4
RNF220-211ENST00000474956 C11orf95C9JLR9 678 aaPredicted RBP17.51■□□□□ 0.39
RNF220-211ENST00000474956 WASHC2AQ641Q2 1341 aa17.49■□□□□ 0.39
RNF220-211ENST00000474956 CROCC2H7BZ55 1655 aa17.49■□□□□ 0.39
RNF220-211ENST00000474956 TSHZ2Q9NRE2 1034 aa17.48■□□□□ 0.39
RNF220-211ENST00000474956 PKD2Q13563 968 aa17.48■□□□□ 0.39
RNF220-211ENST00000474956 ZNF326Q5BKZ1 582 aaKnown RBP17.47■□□□□ 0.39
RNF220-211ENST00000474956 ADGBQ8N7X0 1667 aa17.47■□□□□ 0.39
RNF220-211ENST00000474956 RPRD2Q5VT52 1461 aaKnown RBP17.46■□□□□ 0.39
RNF220-211ENST00000474956 TEX14Q8IWB6 1497 aa17.46■□□□□ 0.39
RNF220-211ENST00000474956 C9orf84Q5VXU9 1444 aa17.46■□□□□ 0.39
RNF220-211ENST00000474956 ANKRD50Q9ULJ7 1429 aa17.45■□□□□ 0.38
RNF220-211ENST00000474956 ANKRD30AQ9BXX3 1397 aa17.44■□□□□ 0.38
RNF220-211ENST00000474956 ANP32CO43423 234 aa17.44■□□□□ 0.38
RNF220-211ENST00000474956 CDC42BPBQ9Y5S2 1711 aa17.43■□□□□ 0.38
RNF220-211ENST00000474956 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
RNF220-211ENST00000474956 TTC37Q6PGP7 1564 aa17.42■□□□□ 0.38
RNF220-211ENST00000474956 SAMD9LQ8IVG5 1584 aa17.41■□□□□ 0.38
RNF220-211ENST00000474956 EIF4G2P78344 907 aaKnown RBP eCLIP17.41■□□□□ 0.38
RNF220-211ENST00000474956 NUP155O75694 1391 aa17.41■□□□□ 0.38
RNF220-211ENST00000474956 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
RNF220-211ENST00000474956 MBD5Q9P267 1494 aa17.4■□□□□ 0.38
RNF220-211ENST00000474956 TSPY4P0CV99 314 aa17.4■□□□□ 0.38
RNF220-211ENST00000474956 TSPY10P0CW01 314 aa17.4■□□□□ 0.38
RNF220-211ENST00000474956 CNGB1Q14028 1251 aaPredicted RBP17.39■□□□□ 0.38
RNF220-211ENST00000474956 KIF15Q9NS87 1388 aa17.39■□□□□ 0.37
RNF220-211ENST00000474956 CCDC184Q52MB2 194 aa17.37■□□□□ 0.37
RNF220-211ENST00000474956 KIAA1107Q9UPP5 1409 aa17.37■□□□□ 0.37
RNF220-211ENST00000474956 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
RNF220-211ENST00000474956 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.36■□□□□ 0.37
RNF220-211ENST00000474956 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.35■□□□□ 0.37
RNF220-211ENST00000474956 PREX2Q70Z35 1606 aa17.35■□□□□ 0.37
RNF220-211ENST00000474956 ARHGAP5Q13017 1502 aa17.34■□□□□ 0.37
RNF220-211ENST00000474956 KDM2AQ9Y2K7 1162 aa17.34■□□□□ 0.37
RNF220-211ENST00000474956 POLR3GLQ9BT43 218 aa17.33■□□□□ 0.36
RNF220-211ENST00000474956 CCER2I3L3R5 266 aa17.32■□□□□ 0.36
RNF220-211ENST00000474956 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
RNF220-211ENST00000474956 FKBP8Q14318 412 aa17.32■□□□□ 0.36
RNF220-211ENST00000474956 ANP32EQ9BTT0 268 aa17.32■□□□□ 0.36
RNF220-211ENST00000474956 SHANK2Q9UPX8 1470 aa17.31■□□□□ 0.36
RNF220-211ENST00000474956 CCDC141Q6ZP82 1450 aa17.31■□□□□ 0.36
RNF220-211ENST00000474956 ARHGEF12Q9NZN5 1544 aa17.3■□□□□ 0.36
RNF220-211ENST00000474956 CCDC7Q96M83 1385 aa17.3■□□□□ 0.36
RNF220-211ENST00000474956 BCANQ96GW7 911 aa17.3■□□□□ 0.36
RNF220-211ENST00000474956 KIF7Q2M1P5 1343 aa17.29■□□□□ 0.36
RNF220-211ENST00000474956 SPATA31E1Q6ZUB1 1445 aa17.29■□□□□ 0.36
RNF220-211ENST00000474956 CLASP1Q7Z460 1538 aa17.28■□□□□ 0.36
RNF220-211ENST00000474956 NEFLP07196 543 aa17.28■□□□□ 0.36
RNF220-211ENST00000474956 ARHGEF5Q12774 1597 aa17.28■□□□□ 0.36
RNF220-211ENST00000474956 ZCCHC11Q5TAX3 1644 aaKnown RBP17.27■□□□□ 0.36
RNF220-211ENST00000474956 RGL3Q3MIN7 710 aa17.25■□□□□ 0.35
RNF220-211ENST00000474956 DCAF11Q8TEB1 546 aa17.25■□□□□ 0.35
RNF220-211ENST00000474956 CNTLNQ9NXG0 1405 aa17.25■□□□□ 0.35
RNF220-211ENST00000474956 BCORL1Q5H9F3 1711 aa17.25■□□□□ 0.35
RNF220-211ENST00000474956 PLEKHH2Q8IVE3 1493 aa17.24■□□□□ 0.35
RNF220-211ENST00000474956 MYO5CQ9NQX4 1742 aa17.24■□□□□ 0.35
RNF220-211ENST00000474956 USP47Q96K76 1375 aa17.23■□□□□ 0.35
RNF220-211ENST00000474956 SENP3-EIF4A1A0A087X0R7 540 aa17.23■□□□□ 0.35
RNF220-211ENST00000474956 FAM135AQ9P2D6 1515 aa17.23■□□□□ 0.35
RNF220-211ENST00000474956 HNRNPUQ00839 825 aaKnown RBP eCLIP17.21■□□□□ 0.35
RNF220-211ENST00000474956 AFAP1Q8N556 730 aa17.21■□□□□ 0.35
RNF220-211ENST00000474956 TRAPPC8Q9Y2L5 1435 aa17.21■□□□□ 0.34
RNF220-211ENST00000474956 PRKRIP1Q9H875 184 aaPredicted RBP17.19■□□□□ 0.34
RNF220-211ENST00000474956 KDM5DQ9BY66 1539 aa17.19■□□□□ 0.34
RNF220-211ENST00000474956 FAM9BQ8IZU0 186 aa17.18■□□□□ 0.34
RNF220-211ENST00000474956 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
RNF220-211ENST00000474956 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
RNF220-211ENST00000474956 PLCH2O75038 1416 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms