RNA–Protein interactions for RNA: ENST00000474743.5

SH3D19-206, Transcript of SH3 domain containing 19, humanhuman

TSL 4

Gene SH3D19, Length 659 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-206ENST00000474743 PITPNM1O00562 1244 aa13.83□□□□□ -0.2
SH3D19-206ENST00000474743 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
SH3D19-206ENST00000474743 EHMT2Q96KQ7 1210 aa13.8□□□□□ -0.2
SH3D19-206ENST00000474743 NUP153P49790 1475 aaKnown RBP13.8□□□□□ -0.2
SH3D19-206ENST00000474743 FMN1Q68DA7 1419 aa13.79□□□□□ -0.2
SH3D19-206ENST00000474743 ATP10BO94823 1461 aa13.79□□□□□ -0.2
SH3D19-206ENST00000474743 HECW1Q76N89 1606 aa13.79□□□□□ -0.2
SH3D19-206ENST00000474743 ZBTB12Q9Y330 459 aaPredicted RBP13.78□□□□□ -0.2
SH3D19-206ENST00000474743 ARID3CA6NKF2 412 aa13.77□□□□□ -0.21
SH3D19-206ENST00000474743 ABCA9Q8IUA7 1624 aa13.75□□□□□ -0.21
SH3D19-206ENST00000474743 MAGI3Q5TCQ9 1506 aa13.75□□□□□ -0.21
SH3D19-206ENST00000474743 ARHGAP35Q9NRY4 1499 aa13.75□□□□□ -0.21
SH3D19-206ENST00000474743 CD109Q6YHK3 1445 aa13.75□□□□□ -0.21
SH3D19-206ENST00000474743 KCNH8Q96L42 1107 aa13.74□□□□□ -0.21
SH3D19-206ENST00000474743 CFAP74Q9C0B2 1584 aa13.7□□□□□ -0.22
SH3D19-206ENST00000474743 CDK13Q14004 1512 aaKnown RBP13.69□□□□□ -0.22
SH3D19-206ENST00000474743 PCF11O94913 1555 aaKnown RBP13.67□□□□□ -0.22
SH3D19-206ENST00000474743 PLEKHD1A6NEE1 506 aa13.67□□□□□ -0.22
SH3D19-206ENST00000474743 CLIP1P30622 1438 aa13.66□□□□□ -0.22
SH3D19-206ENST00000474743 CCDC18Q5T9S5 1454 aa13.66□□□□□ -0.22
SH3D19-206ENST00000474743 KIF14Q15058 1648 aa13.65□□□□□ -0.22
SH3D19-206ENST00000474743 ATP1B4Q9UN42 357 aaPredicted RBP13.65□□□□□ -0.22
SH3D19-206ENST00000474743 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.22
SH3D19-206ENST00000474743 NEO1Q92859 1461 aa13.65□□□□□ -0.22
SH3D19-206ENST00000474743 TTC37Q6PGP7 1564 aa13.64□□□□□ -0.23
SH3D19-206ENST00000474743 FYCO1Q9BQS8 1478 aa13.64□□□□□ -0.23
SH3D19-206ENST00000474743 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
SH3D19-206ENST00000474743 CDK11AQ9UQ88 783 aaPredicted RBP13.64□□□□□ -0.23
SH3D19-206ENST00000474743 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.64□□□□□ -0.23
SH3D19-206ENST00000474743 ARAP3Q8WWN8 1544 aa13.63□□□□□ -0.23
SH3D19-206ENST00000474743 CASKIN1Q8WXD9 1431 aa13.63□□□□□ -0.23
SH3D19-206ENST00000474743 COL17A1Q9UMD9 1497 aaPredicted RBP13.62□□□□□ -0.23
SH3D19-206ENST00000474743 LRRIQ1Q96JM4 1722 aa13.62□□□□□ -0.23
SH3D19-206ENST00000474743 MYO5CQ9NQX4 1742 aa13.62□□□□□ -0.23
SH3D19-206ENST00000474743 TROQ12816 1431 aaPredicted RBP13.59□□□□□ -0.23
SH3D19-206ENST00000474743 FANCAO15360 1455 aa13.59□□□□□ -0.23
SH3D19-206ENST00000474743 CEP162Q5TB80 1403 aa13.57□□□□□ -0.24
SH3D19-206ENST00000474743 GABBR2O75899 941 aa13.56□□□□□ -0.24
SH3D19-206ENST00000474743 RICTORQ6R327 1708 aa13.55□□□□□ -0.24
SH3D19-206ENST00000474743 ADGRL1O94910 1474 aa13.55□□□□□ -0.24
SH3D19-206ENST00000474743 FRMPD1Q5SYB0 1578 aa13.54□□□□□ -0.24
SH3D19-206ENST00000474743 DENND4BO75064 1496 aaPredicted RBP13.54□□□□□ -0.24
SH3D19-206ENST00000474743 C19orf67A6NJJ6 358 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 PLCH2O75038 1416 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 AKNAQ7Z591 1439 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 ARHGAP5Q13017 1502 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 ARHGEF40Q8TER5 1519 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 PREX2Q70Z35 1606 aa13.53□□□□□ -0.24
SH3D19-206ENST00000474743 ZMYM4Q5VZL5 1548 aa13.51□□□□□ -0.25
SH3D19-206ENST00000474743 POGZQ7Z3K3 1410 aa13.48□□□□□ -0.25
SH3D19-206ENST00000474743 ZFYVE16Q7Z3T8 1539 aa13.48□□□□□ -0.25
SH3D19-206ENST00000474743 EHBP1L1Q8N3D4 1523 aa13.48□□□□□ -0.25
SH3D19-206ENST00000474743 CDC42BPAQ5VT25 1732 aa13.47□□□□□ -0.25
SH3D19-206ENST00000474743 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
SH3D19-206ENST00000474743 RAPGEF3O95398 923 aa13.47□□□□□ -0.25
SH3D19-206ENST00000474743 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
SH3D19-206ENST00000474743 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
SH3D19-206ENST00000474743 KDM4FA0A1W2PPD8 638 aa13.46□□□□□ -0.25
SH3D19-206ENST00000474743 ZNF518AQ6AHZ1 1483 aa13.46□□□□□ -0.25
SH3D19-206ENST00000474743 MAGI2Q86UL8 1455 aa13.46□□□□□ -0.25
SH3D19-206ENST00000474743 SCAPERQ9BY12 1400 aa13.46□□□□□ -0.26
SH3D19-206ENST00000474743 MTUS2Q5JR59 1369 aa13.45□□□□□ -0.26
SH3D19-206ENST00000474743 ITSN2Q9NZM3 1697 aa13.45□□□□□ -0.26
SH3D19-206ENST00000474743 ABCC1P33527 1531 aa13.44□□□□□ -0.26
SH3D19-206ENST00000474743 VPS8Q8N3P4 1428 aa13.43□□□□□ -0.26
SH3D19-206ENST00000474743 HECW2Q9P2P5 1572 aa13.43□□□□□ -0.26
SH3D19-206ENST00000474743 KDM5CP41229 1560 aa13.42□□□□□ -0.26
SH3D19-206ENST00000474743 BCORL1Q5H9F3 1711 aa13.42□□□□□ -0.26
SH3D19-206ENST00000474743 SUPT6HQ7KZ85 1726 aaKnown RBP13.41□□□□□ -0.26
SH3D19-206ENST00000474743 TIAM1Q13009 1591 aa13.41□□□□□ -0.26
SH3D19-206ENST00000474743 ARID4BQ4LE39 1312 aaPredicted RBP13.39□□□□□ -0.27
SH3D19-206ENST00000474743 SLC4A1APQ9BWU0 796 aaKnown RBP13.39□□□□□ -0.27
SH3D19-206ENST00000474743 CCNB3Q8WWL7 1395 aa13.39□□□□□ -0.27
SH3D19-206ENST00000474743 ADAMTSL3P82987 1691 aa13.39□□□□□ -0.27
SH3D19-206ENST00000474743 PLEKHH2Q8IVE3 1493 aa13.38□□□□□ -0.27
SH3D19-206ENST00000474743 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
SH3D19-206ENST00000474743 LOC105371045A0A1W2PR82 267 aa13.37□□□□□ -0.27
SH3D19-206ENST00000474743 SYCP2Q9BX26 1530 aa13.37□□□□□ -0.27
SH3D19-206ENST00000474743 GPATCH8Q9UKJ3 1502 aaKnown RBP13.37□□□□□ -0.27
SH3D19-206ENST00000474743 C9orf84Q5VXU9 1444 aa13.37□□□□□ -0.27
SH3D19-206ENST00000474743 YEATS2Q9ULM3 1422 aa13.37□□□□□ -0.27
SH3D19-206ENST00000474743 MADDQ8WXG6 1647 aa13.36□□□□□ -0.27
SH3D19-206ENST00000474743 MYT1LQ9UL68 1186 aa13.35□□□□□ -0.27
SH3D19-206ENST00000474743 ATP10AO60312 1499 aa13.35□□□□□ -0.27
SH3D19-206ENST00000474743 FER1L4A9Z1Z3 1794 aa13.35□□□□□ -0.27
SH3D19-206ENST00000474743 RIMS1Q86UR5 1692 aaKnown RBP13.34□□□□□ -0.27
SH3D19-206ENST00000474743 REREQ9P2R6 1566 aa13.34□□□□□ -0.27
SH3D19-206ENST00000474743 DIP2CQ9Y2E4 1556 aa13.34□□□□□ -0.27
SH3D19-206ENST00000474743 ABCA6Q8N139 1617 aa13.34□□□□□ -0.27
SH3D19-206ENST00000474743 MLH3Q9UHC1 1453 aa13.34□□□□□ -0.27
SH3D19-206ENST00000474743 MAP3K1Q13233 1512 aa13.34□□□□□ -0.27
SH3D19-206ENST00000474743 CFDP1Q9UEE9 299 aaPredicted RBP13.33□□□□□ -0.28
SH3D19-206ENST00000474743 NCOA2Q15596 1464 aa13.32□□□□□ -0.28
SH3D19-206ENST00000474743 ZNF777Q9ULD5 760 aaPredicted RBP13.32□□□□□ -0.28
SH3D19-206ENST00000474743 SIGLEC1Q9BZZ2 1709 aa13.32□□□□□ -0.28
SH3D19-206ENST00000474743 ARHGEF12Q9NZN5 1544 aa13.32□□□□□ -0.28
SH3D19-206ENST00000474743 KIAA1107Q9UPP5 1409 aa13.31□□□□□ -0.28
SH3D19-206ENST00000474743 TRAPPC8Q9Y2L5 1435 aa13.31□□□□□ -0.28
SH3D19-206ENST00000474743 PTPRMP28827 1452 aa13.31□□□□□ -0.28
SH3D19-206ENST00000474743 LRRC9Q6ZRR7 1453 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms