RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 ARAP3Q8WWN8 1544 aa28.27■■■□□ 2.12
SNRPB-203ENST00000474384 PREX2Q70Z35 1606 aa28.26■■■□□ 2.11
SNRPB-203ENST00000474384 KDM6BO15054 1643 aa28.25■■■□□ 2.11
SNRPB-203ENST00000474384 PHLDB1Q86UU1 1377 aa28.24■■■□□ 2.11
SNRPB-203ENST00000474384 AKNAQ7Z591 1439 aa28.24■■■□□ 2.11
SNRPB-203ENST00000474384 COL17A1Q9UMD9 1497 aaPredicted RBP28.23■■■□□ 2.11
SNRPB-203ENST00000474384 CFAP74Q9C0B2 1584 aa28.23■■■□□ 2.11
SNRPB-203ENST00000474384 PPARGC1BQ86YN6 1023 aaKnown RBP28.21■■■□□ 2.11
SNRPB-203ENST00000474384 CFDP1Q9UEE9 299 aaPredicted RBP28.21■■■□□ 2.11
SNRPB-203ENST00000474384 ZNF777Q9ULD5 760 aaPredicted RBP28.19■■■□□ 2.1
SNRPB-203ENST00000474384 ITSN2Q9NZM3 1697 aa28.16■■■□□ 2.1
SNRPB-203ENST00000474384 ADGRL1O94910 1474 aa28.15■■■□□ 2.1
SNRPB-203ENST00000474384 SCAPERQ9BY12 1400 aa28.13■■■□□ 2.09
SNRPB-203ENST00000474384 RAPGEF3O95398 923 aa28.13■■■□□ 2.09
SNRPB-203ENST00000474384 MYOM3Q5VTT5 1437 aa28.1■■■□□ 2.09
SNRPB-203ENST00000474384 DENND4BO75064 1496 aaPredicted RBP28.1■■■□□ 2.09
SNRPB-203ENST00000474384 SAMD9LQ8IVG5 1584 aa28.1■■■□□ 2.09
SNRPB-203ENST00000474384 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
SNRPB-203ENST00000474384 ABCC1P33527 1531 aa28.06■■■□□ 2.08
SNRPB-203ENST00000474384 ARHGEF12Q9NZN5 1544 aa28.06■■■□□ 2.08
SNRPB-203ENST00000474384 HNRNPMP52272 730 aaKnown RBP eCLIP28.04■■■□□ 2.08
SNRPB-203ENST00000474384 FRMPD1Q5SYB0 1578 aa28.03■■■□□ 2.08
SNRPB-203ENST00000474384 RICTORQ6R327 1708 aa28.03■■■□□ 2.08
SNRPB-203ENST00000474384 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
SNRPB-203ENST00000474384 MIA2Q96PC5 1412 aa28.02■■■□□ 2.08
SNRPB-203ENST00000474384 PLEKHH2Q8IVE3 1493 aa28.02■■■□□ 2.08
SNRPB-203ENST00000474384 AFAP1Q8N556 730 aa28.01■■■□□ 2.07
SNRPB-203ENST00000474384 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
SNRPB-203ENST00000474384 KIAA1107Q9UPP5 1409 aa28.01■■■□□ 2.07
SNRPB-203ENST00000474384 CAMSAP2Q08AD1 1489 aa28■■■□□ 2.07
SNRPB-203ENST00000474384 TRAPPC8Q9Y2L5 1435 aa28■■■□□ 2.07
SNRPB-203ENST00000474384 FGD6Q6ZV73 1430 aa27.98■■■□□ 2.07
SNRPB-203ENST00000474384 ZNF518AQ6AHZ1 1483 aa27.96■■■□□ 2.07
SNRPB-203ENST00000474384 PTPN23Q9H3S7 1636 aa27.93■■■□□ 2.06
SNRPB-203ENST00000474384 MBD5Q9P267 1494 aa27.93■■■□□ 2.06
SNRPB-203ENST00000474384 ZMYM4Q5VZL5 1548 aa27.92■■■□□ 2.06
SNRPB-203ENST00000474384 KDM5CP41229 1560 aa27.9■■■□□ 2.06
SNRPB-203ENST00000474384 MYT1LQ9UL68 1186 aa27.89■■■□□ 2.06
SNRPB-203ENST00000474384 TCOF1Q13428 1488 aaKnown RBP27.87■■■□□ 2.05
SNRPB-203ENST00000474384 FAM50AQ14320 339 aaKnown RBP27.86■■■□□ 2.05
SNRPB-203ENST00000474384 RSPH4AQ5TD94 716 aa27.86■■■□□ 2.05
SNRPB-203ENST00000474384 MAGI2Q86UL8 1455 aa27.86■■■□□ 2.05
SNRPB-203ENST00000474384 SPAG9O60271 1321 aaKnown RBP27.86■■■□□ 2.05
SNRPB-203ENST00000474384 YEATS2Q9ULM3 1422 aa27.85■■■□□ 2.05
SNRPB-203ENST00000474384 ARHGEF5Q12774 1597 aa27.85■■■□□ 2.05
SNRPB-203ENST00000474384 CCDC141Q6ZP82 1450 aa27.84■■■□□ 2.05
SNRPB-203ENST00000474384 ZFYVE16Q7Z3T8 1539 aa27.84■■■□□ 2.05
SNRPB-203ENST00000474384 MLH3Q9UHC1 1453 aa27.83■■■□□ 2.05
SNRPB-203ENST00000474384 HECW2Q9P2P5 1572 aa27.83■■■□□ 2.05
SNRPB-203ENST00000474384 KIDINS220Q9ULH0 1771 aa27.79■■■□□ 2.04
SNRPB-203ENST00000474384 ARHGEF40Q8TER5 1519 aa27.79■■■□□ 2.04
SNRPB-203ENST00000474384 TSPY4P0CV99 314 aa27.79■■■□□ 2.04
SNRPB-203ENST00000474384 TSPY10P0CW01 314 aa27.79■■■□□ 2.04
SNRPB-203ENST00000474384 INO80Q9ULG1 1556 aaPredicted RBP27.76■■■□□ 2.03
SNRPB-203ENST00000474384 ATP7AQ04656 1500 aa27.76■■■□□ 2.03
SNRPB-203ENST00000474384 ABCC5O15440 1437 aa27.75■■■□□ 2.03
SNRPB-203ENST00000474384 ABCA6Q8N139 1617 aa27.74■■■□□ 2.03
SNRPB-203ENST00000474384 ATP10AO60312 1499 aa27.74■■■□□ 2.03
SNRPB-203ENST00000474384 DAPK1P53355 1430 aa27.74■■■□□ 2.03
SNRPB-203ENST00000474384 RRBP1Q9P2E9 1410 aaKnown RBP27.74■■■□□ 2.03
SNRPB-203ENST00000474384 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
SNRPB-203ENST00000474384 DIP2CQ9Y2E4 1556 aa27.73■■■□□ 2.03
SNRPB-203ENST00000474384 RTEL1-TNFRSF6BF6WH68 1400 aa27.73■■■□□ 2.03
SNRPB-203ENST00000474384 C9orf84Q5VXU9 1444 aa27.7■■■□□ 2.03
SNRPB-203ENST00000474384 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.69■■■□□ 2.024e-8■■□□□ 13.5
SNRPB-203ENST00000474384 MAST1Q9Y2H9 1570 aa27.69■■■□□ 2.02
SNRPB-203ENST00000474384 CROCC2H7BZ55 1655 aa27.68■■■□□ 2.02
SNRPB-203ENST00000474384 ARID4BQ4LE39 1312 aaPredicted RBP27.67■■■□□ 2.02
SNRPB-203ENST00000474384 CHIC2Q9UKJ5 165 aa27.67■■■□□ 2.02
SNRPB-203ENST00000474384 ITGAEP38570 1179 aa27.66■■■□□ 2.02
SNRPB-203ENST00000474384 SHANK2Q9UPX8 1470 aa27.65■■■□□ 2.02
SNRPB-203ENST00000474384 SIGLEC1Q9BZZ2 1709 aa27.64■■■□□ 2.02
SNRPB-203ENST00000474384 PTPRKQ15262 1439 aa27.61■■■□□ 2.01
SNRPB-203ENST00000474384 A2MP01023 1474 aa27.61■■■□□ 2.01
SNRPB-203ENST00000474384 ADGBQ8N7X0 1667 aa27.61■■■□□ 2.01
SNRPB-203ENST00000474384 REREQ9P2R6 1566 aa27.6■■■□□ 2.01
SNRPB-203ENST00000474384 RRP7BPQ9NSQ0 103 aa27.59■■■□□ 2.01
SNRPB-203ENST00000474384 PLXNC1O60486 1568 aa27.57■■■□□ 2
SNRPB-203ENST00000474384 DHX29Q7Z478 1369 aaKnown RBP27.57■■■□□ 2
SNRPB-203ENST00000474384 ANKRD30AQ9BXX3 1397 aa27.56■■■□□ 2
SNRPB-203ENST00000474384 MLECQ14165 292 aa27.55■■■□□ 2
SNRPB-203ENST00000474384 NCOA1Q15788 1441 aa27.54■■■□□ 2
SNRPB-203ENST00000474384 AGLP35573 1532 aa27.53■■■□□ 2
SNRPB-203ENST00000474384 ADGRL2O95490 1459 aa27.53■■■□□ 2
SNRPB-203ENST00000474384 KIF15Q9NS87 1388 aa27.53■■■□□ 2
SNRPB-203ENST00000474384 BCORL1Q5H9F3 1711 aa27.51■■□□□ 1.99
SNRPB-203ENST00000474384 KDM4FA0A1W2PPD8 638 aa27.51■■□□□ 1.99
SNRPB-203ENST00000474384 DUOX2Q9NRD8 1548 aa27.49■■□□□ 1.99
SNRPB-203ENST00000474384 KIF3BO15066 747 aa27.47■■□□□ 1.99
SNRPB-203ENST00000474384 ROCK1Q13464 1354 aa27.47■■□□□ 1.99
SNRPB-203ENST00000474384 ADAMTSL3P82987 1691 aa27.44■■□□□ 1.98
SNRPB-203ENST00000474384 GGT6Q6P531 493 aa27.44■■□□□ 1.98
SNRPB-203ENST00000474384 ERBINQ96RT1 1412 aa27.41■■□□□ 1.98
SNRPB-203ENST00000474384 MADDQ8WXG6 1647 aa27.39■■□□□ 1.98
SNRPB-203ENST00000474384 EIF2AK4Q9P2K8 1649 aaKnown RBP27.38■■□□□ 1.97
SNRPB-203ENST00000474384 ANKRD50Q9ULJ7 1429 aa27.37■■□□□ 1.97
SNRPB-203ENST00000474384 FER1L4A9Z1Z3 1794 aa27.35■■□□□ 1.97
SNRPB-203ENST00000474384 ESF1Q9H501 851 aaKnown RBP27.34■■□□□ 1.97
SNRPB-203ENST00000474384 RIMS1Q86UR5 1692 aaKnown RBP27.32■■□□□ 1.96
SNRPB-203ENST00000474384 RNF17Q9BXT8 1623 aaKnown RBP27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms