RNA–Protein interactions for RNA: ENST00000473778.5

C9orf3-214, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 2,396 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-214ENST00000473778 DISP1Q96F81 1524 aa15.38■□□□□ 0.05
C9orf3-214ENST00000473778 ZNF644Q9H582 1327 aaPredicted RBP15.37■□□□□ 0.05
C9orf3-214ENST00000473778 KIAA0556O60303 1618 aa15.36■□□□□ 0.05
C9orf3-214ENST00000473778 NUP153P49790 1475 aaKnown RBP15.36■□□□□ 0.05
C9orf3-214ENST00000473778 L3MBTL2Q969R5 705 aa15.35■□□□□ 0.05
C9orf3-214ENST00000473778 DAPK1P53355 1430 aa15.35■□□□□ 0.05
C9orf3-214ENST00000473778 C11orf95C9JLR9 678 aaPredicted RBP15.34■□□□□ 0.05
C9orf3-214ENST00000473778 ABCC5O15440 1437 aa15.33■□□□□ 0.04
C9orf3-214ENST00000473778 DNMT1P26358 1616 aaKnown RBP15.33■□□□□ 0.04
C9orf3-214ENST00000473778 ANP32EQ9BTT0 268 aa15.33■□□□□ 0.04
C9orf3-214ENST00000473778 CCDC184Q52MB2 194 aa15.31■□□□□ 0.04
C9orf3-214ENST00000473778 KIAA0586Q9BVV6 1533 aa15.31■□□□□ 0.04
C9orf3-214ENST00000473778 ANKRD30BQ9BXX2 1392 aa15.31■□□□□ 0.04
C9orf3-214ENST00000473778 NBPF8Q3BBV2 869 aa15.31■□□□□ 0.04
C9orf3-214ENST00000473778 TEX14Q8IWB6 1497 aa15.3■□□□□ 0.04
C9orf3-214ENST00000473778 IFT140Q96RY7 1462 aa15.3■□□□□ 0.04
C9orf3-214ENST00000473778 RAPGEF6Q8TEU7 1601 aa15.29■□□□□ 0.04
C9orf3-214ENST00000473778 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
C9orf3-214ENST00000473778 RPRD2Q5VT52 1461 aaKnown RBP15.29■□□□□ 0.04
C9orf3-214ENST00000473778 EIF4G2P78344 907 aaKnown RBP eCLIP15.28■□□□□ 0.04
C9orf3-214ENST00000473778 EIF4G3O43432 1585 aaKnown RBP15.28■□□□□ 0.04
C9orf3-214ENST00000473778 GRIN2AQ12879 1464 aa15.28■□□□□ 0.04
C9orf3-214ENST00000473778 HNRNPUQ00839 825 aaKnown RBP eCLIP15.27■□□□□ 0.04
C9orf3-214ENST00000473778 PRG4Q92954 1404 aaPredicted RBP15.27■□□□□ 0.03
C9orf3-214ENST00000473778 NCOA1Q15788 1441 aa15.26■□□□□ 0.03
C9orf3-214ENST00000473778 CNTLNQ9NXG0 1405 aa15.26■□□□□ 0.03
C9orf3-214ENST00000473778 NEFLP07196 543 aa15.25■□□□□ 0.03
C9orf3-214ENST00000473778 PLB1Q6P1J6 1458 aa15.24■□□□□ 0.03
C9orf3-214ENST00000473778 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
C9orf3-214ENST00000473778 KIF14Q15058 1648 aa15.24■□□□□ 0.03
C9orf3-214ENST00000473778 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
C9orf3-214ENST00000473778 PZPP20742 1482 aa15.23■□□□□ 0.03
C9orf3-214ENST00000473778 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
C9orf3-214ENST00000473778 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
C9orf3-214ENST00000473778 CAMSAP2Q08AD1 1489 aa15.22■□□□□ 0.03
C9orf3-214ENST00000473778 IRX6P78412 446 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-214ENST00000473778 PRKRIP1Q9H875 184 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-214ENST00000473778 TROQ12816 1431 aaPredicted RBP15.2■□□□□ 0.02
C9orf3-214ENST00000473778 GPATCH8Q9UKJ3 1502 aaKnown RBP15.19■□□□□ 0.02
C9orf3-214ENST00000473778 POLR1AO95602 1720 aaPredicted RBP15.19■□□□□ 0.02
C9orf3-214ENST00000473778 KIF7Q2M1P5 1343 aa15.19■□□□□ 0.02
C9orf3-214ENST00000473778 RBM19Q9Y4C8 960 aaKnown RBP15.17■□□□□ 0.02
C9orf3-214ENST00000473778 CROCC2H7BZ55 1655 aa15.17■□□□□ 0.02
C9orf3-214ENST00000473778 CFDP1Q9UEE9 299 aaPredicted RBP15.17■□□□□ 0.02
C9orf3-214ENST00000473778 ADGBQ8N7X0 1667 aa15.16■□□□□ 0.02
C9orf3-214ENST00000473778 ITSN2Q9NZM3 1697 aa15.16■□□□□ 0.02
C9orf3-214ENST00000473778 ADCY10Q96PN6 1610 aa15.16■□□□□ 0.02
C9orf3-214ENST00000473778 CDK11AQ9UQ88 783 aaPredicted RBP15.16■□□□□ 0.02
C9orf3-214ENST00000473778 MBD5Q9P267 1494 aa15.15■□□□□ 0.02
C9orf3-214ENST00000473778 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
C9orf3-214ENST00000473778 BCORL1Q5H9F3 1711 aa15.15■□□□□ 0.02
C9orf3-214ENST00000473778 ZNF777Q9ULD5 760 aaPredicted RBP15.14■□□□□ 0.01
C9orf3-214ENST00000473778 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
C9orf3-214ENST00000473778 MAGI1Q96QZ7 1491 aaPredicted RBP15.13■□□□□ 0.01
C9orf3-214ENST00000473778 ADGRL2O95490 1459 aa15.13■□□□□ 0.01
C9orf3-214ENST00000473778 SYNJ2O15056 1496 aa15.12■□□□□ 0.01
C9orf3-214ENST00000473778 CHMP7Q8WUX9 453 aaPredicted RBP15.12■□□□□ 0.01
C9orf3-214ENST00000473778 MRS2Q9HD23 443 aa15.12■□□□□ 0.01
C9orf3-214ENST00000473778 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
C9orf3-214ENST00000473778 FBLN2P98095 1184 aa15.11■□□□□ 0.01
C9orf3-214ENST00000473778 KIAA1107Q9UPP5 1409 aa15.1■□□□□ 0.01
C9orf3-214ENST00000473778 PKD2Q13563 968 aa15.1■□□□□ 0.01
C9orf3-214ENST00000473778 DHX29Q7Z478 1369 aaKnown RBP15.09■□□□□ 0.01
C9orf3-214ENST00000473778 NUP160Q12769 1436 aa15.09■□□□□ 0.01
C9orf3-214ENST00000473778 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
C9orf3-214ENST00000473778 ZNF326Q5BKZ1 582 aaKnown RBP15.07■□□□□ 0
C9orf3-214ENST00000473778 ANKRD50Q9ULJ7 1429 aa15.07■□□□□ 0
C9orf3-214ENST00000473778 ERCC6Q03468 1493 aa15.07■□□□□ 0
C9orf3-214ENST00000473778 USP47Q96K76 1375 aa15.07■□□□□ 0
C9orf3-214ENST00000473778 KDM5CP41229 1560 aa15.07■□□□□ 0
C9orf3-214ENST00000473778 ABCC10Q5T3U5 1492 aa15.06■□□□□ 0
C9orf3-214ENST00000473778 ABCA8O94911 1581 aa15.05■□□□□ 0
C9orf3-214ENST00000473778 ZBED9Q6R2W3 1325 aa15.05■□□□□ 0
C9orf3-214ENST00000473778 CNGB1Q14028 1251 aaPredicted RBP15.05■□□□□ 0
C9orf3-214ENST00000473778 ATP10BO94823 1461 aa15.05■□□□□ -0
C9orf3-214ENST00000473778 ANKRD30AQ9BXX3 1397 aa15.05■□□□□ -0
C9orf3-214ENST00000473778 CARMIL2Q6F5E8 1435 aa15.03■□□□□ -0
C9orf3-214ENST00000473778 C9orf84Q5VXU9 1444 aa15.02■□□□□ -0
C9orf3-214ENST00000473778 POLR3GLQ9BT43 218 aa15.02□□□□□ -0.01
C9orf3-214ENST00000473778 NUP155O75694 1391 aa15.01□□□□□ -0.01
C9orf3-214ENST00000473778 DNAJC5Q9H3Z4 198 aa15.01□□□□□ -0.01
C9orf3-214ENST00000473778 SHANK2Q9UPX8 1470 aa15□□□□□ -0.01
C9orf3-214ENST00000473778 UHRF1BP1Q6BDS2 1440 aa15□□□□□ -0.01
C9orf3-214ENST00000473778 SENP3-EIF4A1A0A087X0R7 540 aa14.99□□□□□ -0.01
C9orf3-214ENST00000473778 PLEKHD1A6NEE1 506 aa14.99□□□□□ -0.01
C9orf3-214ENST00000473778 RALGAPBQ86X10 1494 aa14.98□□□□□ -0.01
C9orf3-214ENST00000473778 HNRNPMP52272 730 aaKnown RBP eCLIP14.98□□□□□ -0.01
C9orf3-214ENST00000473778 KDM5DQ9BY66 1539 aa14.97□□□□□ -0.01
C9orf3-214ENST00000473778 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
C9orf3-214ENST00000473778 PPP4R2Q9NY27 417 aa14.97□□□□□ -0.01
C9orf3-214ENST00000473778 CDC42BPBQ9Y5S2 1711 aa14.96□□□□□ -0.02
C9orf3-214ENST00000473778 KIF15Q9NS87 1388 aa14.95□□□□□ -0.02
C9orf3-214ENST00000473778 PTPRGP23470 1445 aa14.95□□□□□ -0.02
C9orf3-214ENST00000473778 ERICH6BQ5W0A0 696 aa14.95□□□□□ -0.02
C9orf3-214ENST00000473778 KDM2AQ9Y2K7 1162 aa14.95□□□□□ -0.02
C9orf3-214ENST00000473778 SAMD9LQ8IVG5 1584 aa14.95□□□□□ -0.02
C9orf3-214ENST00000473778 ARHGEF12Q9NZN5 1544 aa14.94□□□□□ -0.02
C9orf3-214ENST00000473778 CARD11Q9BXL7 1154 aa14.93□□□□□ -0.02
C9orf3-214ENST00000473778 ST20-MTHFSA0A0A6YYL1 179 aa14.93□□□□□ -0.02
C9orf3-214ENST00000473778 ARHGEF5Q12774 1597 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms