RNA–Protein interactions for RNA: ENST00000473348.5

TRAPPC12-217, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-217ENST00000473348 CD109Q6YHK3 1445 aa19.35■□□□□ 0.69
TRAPPC12-217ENST00000473348 FAM69CQ0P6D2 419 aa19.35■□□□□ 0.69
TRAPPC12-217ENST00000473348 PLCH2O75038 1416 aa19.34■□□□□ 0.69
TRAPPC12-217ENST00000473348 SAMD9LQ8IVG5 1584 aa19.34■□□□□ 0.69
TRAPPC12-217ENST00000473348 FGD6Q6ZV73 1430 aa19.34■□□□□ 0.69
TRAPPC12-217ENST00000473348 MIA2Q96PC5 1412 aa19.32■□□□□ 0.68
TRAPPC12-217ENST00000473348 FANCAO15360 1455 aa19.3■□□□□ 0.68
TRAPPC12-217ENST00000473348 CAMSAP2Q08AD1 1489 aa19.3■□□□□ 0.68
TRAPPC12-217ENST00000473348 RRBP1Q9P2E9 1410 aaKnown RBP19.29■□□□□ 0.68
TRAPPC12-217ENST00000473348 ABCC1P33527 1531 aa19.29■□□□□ 0.68
TRAPPC12-217ENST00000473348 TRHP20396 242 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC12-217ENST00000473348 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
TRAPPC12-217ENST00000473348 TCOF1Q13428 1488 aaKnown RBP19.28■□□□□ 0.68
TRAPPC12-217ENST00000473348 TEX14Q8IWB6 1497 aa19.28■□□□□ 0.68
TRAPPC12-217ENST00000473348 CROCC2H7BZ55 1655 aa19.27■□□□□ 0.68
TRAPPC12-217ENST00000473348 NEO1Q92859 1461 aa19.26■□□□□ 0.67
TRAPPC12-217ENST00000473348 SYCP2Q9BX26 1530 aa19.25■□□□□ 0.67
TRAPPC12-217ENST00000473348 DNMT1P26358 1616 aaKnown RBP19.24■□□□□ 0.67
TRAPPC12-217ENST00000473348 EFCAB2Q5VUJ9 269 aa19.23■□□□□ 0.67
TRAPPC12-217ENST00000473348 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
TRAPPC12-217ENST00000473348 ZNF777Q9ULD5 760 aaPredicted RBP19.22■□□□□ 0.67
TRAPPC12-217ENST00000473348 ARHGEF5Q12774 1597 aa19.22■□□□□ 0.67
TRAPPC12-217ENST00000473348 ADGRL1O94910 1474 aa19.22■□□□□ 0.67
TRAPPC12-217ENST00000473348 RICTORQ6R327 1708 aa19.21■□□□□ 0.67
TRAPPC12-217ENST00000473348 AKNAQ7Z591 1439 aa19.21■□□□□ 0.67
TRAPPC12-217ENST00000473348 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
TRAPPC12-217ENST00000473348 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
TRAPPC12-217ENST00000473348 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.663e-6■■■■□ 26.4
TRAPPC12-217ENST00000473348 FAM50AQ14320 339 aaKnown RBP19.18■□□□□ 0.66
TRAPPC12-217ENST00000473348 ARHGEF12Q9NZN5 1544 aa19.18■□□□□ 0.66
TRAPPC12-217ENST00000473348 KIAA1107Q9UPP5 1409 aa19.17■□□□□ 0.66
TRAPPC12-217ENST00000473348 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
TRAPPC12-217ENST00000473348 MBD5Q9P267 1494 aa19.15■□□□□ 0.66
TRAPPC12-217ENST00000473348 FRMPD1Q5SYB0 1578 aa19.15■□□□□ 0.66
TRAPPC12-217ENST00000473348 SCAPERQ9BY12 1400 aa19.14■□□□□ 0.65
TRAPPC12-217ENST00000473348 DAPK1P53355 1430 aa19.13■□□□□ 0.65
TRAPPC12-217ENST00000473348 KDM6BO15054 1643 aa19.13■□□□□ 0.65
TRAPPC12-217ENST00000473348 KDM5CP41229 1560 aa19.12■□□□□ 0.65
TRAPPC12-217ENST00000473348 MAST1Q9Y2H9 1570 aa19.12■□□□□ 0.65
TRAPPC12-217ENST00000473348 POGZQ7Z3K3 1410 aa19.12■□□□□ 0.65
TRAPPC12-217ENST00000473348 INO80Q9ULG1 1556 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC12-217ENST00000473348 DENND4BO75064 1496 aaPredicted RBP19.11■□□□□ 0.65
TRAPPC12-217ENST00000473348 ZNF518AQ6AHZ1 1483 aa19.1■□□□□ 0.65
TRAPPC12-217ENST00000473348 SHANK2Q9UPX8 1470 aa19.1■□□□□ 0.65
TRAPPC12-217ENST00000473348 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
TRAPPC12-217ENST00000473348 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.651e-6■■■■□ 26.1
TRAPPC12-217ENST00000473348 TRIM26Q12899 539 aaPredicted RBP19.1■□□□□ 0.65
TRAPPC12-217ENST00000473348 HECW2Q9P2P5 1572 aa19.1■□□□□ 0.65
TRAPPC12-217ENST00000473348 ABCC5O15440 1437 aa19.09■□□□□ 0.65
TRAPPC12-217ENST00000473348 ZMYM4Q5VZL5 1548 aa19.08■□□□□ 0.64
TRAPPC12-217ENST00000473348 ZFYVE16Q7Z3T8 1539 aa19.08■□□□□ 0.64
TRAPPC12-217ENST00000473348 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.64
TRAPPC12-217ENST00000473348 GCC2Q8IWJ2 1684 aa19.06■□□□□ 0.64
TRAPPC12-217ENST00000473348 PLXNC1O60486 1568 aa19.06■□□□□ 0.64
TRAPPC12-217ENST00000473348 ATP7AQ04656 1500 aa19.05■□□□□ 0.64
TRAPPC12-217ENST00000473348 COL17A1Q9UMD9 1497 aaPredicted RBP19.05■□□□□ 0.64
TRAPPC12-217ENST00000473348 ITGAEP38570 1179 aa19.05■□□□□ 0.64
TRAPPC12-217ENST00000473348 PTPRKQ15262 1439 aa19.05■□□□□ 0.64
TRAPPC12-217ENST00000473348 C9orf84Q5VXU9 1444 aa19.05■□□□□ 0.64
TRAPPC12-217ENST00000473348 RSPH4AQ5TD94 716 aa19.04■□□□□ 0.64
TRAPPC12-217ENST00000473348 ABCA6Q8N139 1617 aa19.03■□□□□ 0.64
TRAPPC12-217ENST00000473348 ADGRL2O95490 1459 aa19.02■□□□□ 0.63
TRAPPC12-217ENST00000473348 AFAP1Q8N556 730 aa19.01■□□□□ 0.63
TRAPPC12-217ENST00000473348 RAPGEF3O95398 923 aa19■□□□□ 0.63
TRAPPC12-217ENST00000473348 MLH3Q9UHC1 1453 aa19■□□□□ 0.63
TRAPPC12-217ENST00000473348 DIP2CQ9Y2E4 1556 aa18.99■□□□□ 0.63
TRAPPC12-217ENST00000473348 ARHGEF40Q8TER5 1519 aa18.99■□□□□ 0.63
TRAPPC12-217ENST00000473348 SPAG9O60271 1321 aaKnown RBP18.99■□□□□ 0.63
TRAPPC12-217ENST00000473348 TSPY4P0CV99 314 aa18.98■□□□□ 0.63
TRAPPC12-217ENST00000473348 TSPY10P0CW01 314 aa18.98■□□□□ 0.63
TRAPPC12-217ENST00000473348 RTEL1-TNFRSF6BF6WH68 1400 aa18.98■□□□□ 0.63
TRAPPC12-217ENST00000473348 CHIC2Q9UKJ5 165 aa18.97■□□□□ 0.63
TRAPPC12-217ENST00000473348 ROCK1Q13464 1354 aa18.96■□□□□ 0.63
TRAPPC12-217ENST00000473348 MAGI2Q86UL8 1455 aa18.96■□□□□ 0.63
TRAPPC12-217ENST00000473348 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
TRAPPC12-217ENST00000473348 NCOA1Q15788 1441 aa18.94■□□□□ 0.62
TRAPPC12-217ENST00000473348 PCGF6Q9BYE7 350 aa18.93■□□□□ 0.62
TRAPPC12-217ENST00000473348 MYT1LQ9UL68 1186 aa18.93■□□□□ 0.62
TRAPPC12-217ENST00000473348 DUOX2Q9NRD8 1548 aa18.92■□□□□ 0.62
TRAPPC12-217ENST00000473348 HFM1A2PYH4 1435 aa18.91■□□□□ 0.62
TRAPPC12-217ENST00000473348 YEATS2Q9ULM3 1422 aa18.91■□□□□ 0.62
TRAPPC12-217ENST00000473348 EIF2AK4Q9P2K8 1649 aaKnown RBP18.91■□□□□ 0.62
TRAPPC12-217ENST00000473348 KIF15Q9NS87 1388 aa18.91■□□□□ 0.62
TRAPPC12-217ENST00000473348 NAIPQ13075 1403 aa18.9■□□□□ 0.62
TRAPPC12-217ENST00000473348 REREQ9P2R6 1566 aa18.89■□□□□ 0.62
TRAPPC12-217ENST00000473348 SIGLEC1Q9BZZ2 1709 aa18.89■□□□□ 0.61
TRAPPC12-217ENST00000473348 RRP7BPQ9NSQ0 103 aa18.89■□□□□ 0.61
TRAPPC12-217ENST00000473348 BCORL1Q5H9F3 1711 aa18.88■□□□□ 0.61
TRAPPC12-217ENST00000473348 A2MP01023 1474 aa18.87■□□□□ 0.61
TRAPPC12-217ENST00000473348 ATP10AO60312 1499 aa18.85■□□□□ 0.61
TRAPPC12-217ENST00000473348 ERBINQ96RT1 1412 aa18.84■□□□□ 0.61
TRAPPC12-217ENST00000473348 SETD5Q9C0A6 1442 aa18.83■□□□□ 0.61
TRAPPC12-217ENST00000473348 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.61
TRAPPC12-217ENST00000473348 DEPDC5O75140 1603 aa18.83■□□□□ 0.61
TRAPPC12-217ENST00000473348 RNF17Q9BXT8 1623 aaKnown RBP18.83■□□□□ 0.61
TRAPPC12-217ENST00000473348 UNC13BO14795 1591 aa18.83■□□□□ 0.6
TRAPPC12-217ENST00000473348 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
TRAPPC12-217ENST00000473348 RAB3GAP2Q9H2M9 1393 aa18.8■□□□□ 0.6
TRAPPC12-217ENST00000473348 AGLP35573 1532 aa18.79■□□□□ 0.6
TRAPPC12-217ENST00000473348 MROH1Q8NDA8 1641 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms