RNA–Protein interactions for RNA: ENST00000473230.1

RCL1-209, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3

Gene RCL1, Length 441 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-209ENST00000473230 ZBTB47Q9UFB7 747 aaPredicted RBP11.79□□□□□ -0.52
RCL1-209ENST00000473230 CHMP7Q8WUX9 453 aaPredicted RBP11.78□□□□□ -0.52
RCL1-209ENST00000473230 WRNQ14191 1432 aaPredicted RBP eCLIP11.77□□□□□ -0.52
RCL1-209ENST00000473230 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
RCL1-209ENST00000473230 MAGI1Q96QZ7 1491 aaPredicted RBP11.76□□□□□ -0.53
RCL1-209ENST00000473230 NUBP1P53384 320 aa11.75□□□□□ -0.53
RCL1-209ENST00000473230 SNAPC4Q5SXM2 1469 aa11.75□□□□□ -0.53
RCL1-209ENST00000473230 FAM212AQ96EL1 285 aa11.74□□□□□ -0.53
RCL1-209ENST00000473230 GAPVD1Q14C86 1478 aa11.74□□□□□ -0.53
RCL1-209ENST00000473230 ABCA10Q8WWZ4 1543 aa11.74□□□□□ -0.53
RCL1-209ENST00000473230 SYNJ2O15056 1496 aa11.71□□□□□ -0.53
RCL1-209ENST00000473230 ARHGEF11O15085 1522 aa11.7□□□□□ -0.54
RCL1-209ENST00000473230 TOP2BQ02880 1626 aa11.7□□□□□ -0.54
RCL1-209ENST00000473230 CHD1O14646 1710 aa11.68□□□□□ -0.54
RCL1-209ENST00000473230 SYNJ1O43426 1573 aa11.67□□□□□ -0.54
RCL1-209ENST00000473230 IRX5P78411 483 aaPredicted RBP11.67□□□□□ -0.54
RCL1-209ENST00000473230 RIMBP3CA6NJZ7 1639 aa11.67□□□□□ -0.54
RCL1-209ENST00000473230 RIMBP3BA6NNM3 1639 aa11.67□□□□□ -0.54
RCL1-209ENST00000473230 RIMBP3Q9UFD9 1639 aa11.67□□□□□ -0.54
RCL1-209ENST00000473230 BIVM-ERCC5R4GMW8 1640 aa11.67□□□□□ -0.54
RCL1-209ENST00000473230 CYB5RLQ6IPT4 315 aa11.66□□□□□ -0.54
RCL1-209ENST00000473230 ABCA5Q8WWZ7 1642 aa11.65□□□□□ -0.54
RCL1-209ENST00000473230 OCEL1Q9H607 264 aa11.65□□□□□ -0.54
RCL1-209ENST00000473230 SNPHO15079 494 aa11.62□□□□□ -0.55
RCL1-209ENST00000473230 MMRN1Q13201 1228 aa11.62□□□□□ -0.55
RCL1-209ENST00000473230 DCAF8Q5TAQ9 597 aa11.62□□□□□ -0.55
RCL1-209ENST00000473230 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.62□□□□□ -0.55
RCL1-209ENST00000473230 PBRM1Q86U86 1689 aa11.62□□□□□ -0.55
RCL1-209ENST00000473230 FHAD1B1AJZ9 1412 aa11.61□□□□□ -0.55
RCL1-209ENST00000473230 CLASP1Q7Z460 1538 aa11.61□□□□□ -0.55
RCL1-209ENST00000473230 PYGBP11216 843 aa11.61□□□□□ -0.55
RCL1-209ENST00000473230 TMEM121BQ9BXQ6 578 aaPredicted RBP11.61□□□□□ -0.55
RCL1-209ENST00000473230 ERICH3Q5RHP9 1530 aa11.6□□□□□ -0.55
RCL1-209ENST00000473230 GRIN2AQ12879 1464 aa11.6□□□□□ -0.55
RCL1-209ENST00000473230 SPNS2Q8IVW8 549 aa11.6□□□□□ -0.55
RCL1-209ENST00000473230 MARVELD3Q96A59 401 aa11.6□□□□□ -0.55
RCL1-209ENST00000473230 ADAMTS12P58397 1594 aa11.58□□□□□ -0.56
RCL1-209ENST00000473230 ARAP1Q96P48 1450 aa11.57□□□□□ -0.56
RCL1-209ENST00000473230 KIF27Q86VH2 1401 aa11.56□□□□□ -0.56
RCL1-209ENST00000473230 FBXO3Q9UK99 471 aa11.56□□□□□ -0.56
RCL1-209ENST00000473230 PCDHB8Q9UN66 801 aa11.56□□□□□ -0.56
RCL1-209ENST00000473230 NUP160Q12769 1436 aa11.55□□□□□ -0.56
RCL1-209ENST00000473230 C3orf67Q6ZVT6 689 aa11.5□□□□□ -0.57
RCL1-209ENST00000473230 GOLGA2Q08379 1002 aa11.49□□□□□ -0.57
RCL1-209ENST00000473230 IGF1RP08069 1367 aa11.49□□□□□ -0.57
RCL1-209ENST00000473230 CEP170Q5SW79 1584 aa11.49□□□□□ -0.57
RCL1-209ENST00000473230 EMP3P54852 163 aa11.47□□□□□ -0.57
RCL1-209ENST00000473230 JPH4Q96JJ6 628 aa11.47□□□□□ -0.57
RCL1-209ENST00000473230 PRG4Q92954 1404 aaPredicted RBP11.45□□□□□ -0.58
RCL1-209ENST00000473230 MKRN3Q13064 507 aaKnown RBP11.45□□□□□ -0.58
RCL1-209ENST00000473230 CARMIL1Q5VZK9 1371 aa11.44□□□□□ -0.58
RCL1-209ENST00000473230 CUL7Q14999 1698 aa11.44□□□□□ -0.58
RCL1-209ENST00000473230 L3MBTL3Q96JM7 780 aaPredicted RBP11.43□□□□□ -0.58
RCL1-209ENST00000473230 SHROOM2Q13796 1616 aa11.42□□□□□ -0.58
RCL1-209ENST00000473230 KIAA0586Q9BVV6 1533 aa11.42□□□□□ -0.58
RCL1-209ENST00000473230 PDCD7Q8N8D1 485 aaKnown RBP11.42□□□□□ -0.58
RCL1-209ENST00000473230 RUSC2Q8N2Y8 1516 aa11.4□□□□□ -0.58
RCL1-209ENST00000473230 FAM205CA6NFA0 338 aa11.4□□□□□ -0.58
RCL1-209ENST00000473230 VASPP50552 380 aaPredicted RBP11.39□□□□□ -0.59
RCL1-209ENST00000473230 ERCC6L2Q5T890 1561 aa11.39□□□□□ -0.59
RCL1-209ENST00000473230 ZNF467Q7Z7K2 595 aaPredicted RBP11.39□□□□□ -0.59
RCL1-209ENST00000473230 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.39□□□□□ -0.597e-7■■■□□ 14.8
RCL1-209ENST00000473230 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
RCL1-209ENST00000473230 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
RCL1-209ENST00000473230 CARMIL2Q6F5E8 1435 aa11.36□□□□□ -0.59
RCL1-209ENST00000473230 GSE1Q14687 1217 aa11.36□□□□□ -0.59
RCL1-209ENST00000473230 RAPGEF2Q9Y4G8 1499 aa11.35□□□□□ -0.59
RCL1-209ENST00000473230 POTEB3A0JP26 581 aa11.34□□□□□ -0.59
RCL1-209ENST00000473230 POTEBQ6S5H4 581 aa11.34□□□□□ -0.59
RCL1-209ENST00000473230 KRTAP3-3Q9BYR6 98 aa11.33□□□□□ -0.6
RCL1-209ENST00000473230 KRTAP3-2Q9BYR7 98 aa11.33□□□□□ -0.6
RCL1-209ENST00000473230 PSEN1P49768 467 aa11.32□□□□□ -0.6
RCL1-209ENST00000473230 PTPRGP23470 1445 aa11.32□□□□□ -0.6
RCL1-209ENST00000473230 LOC105371045A0A1W2PR82 267 aa11.31□□□□□ -0.6
RCL1-209ENST00000473230 TNIKQ9UKE5 1360 aa11.3□□□□□ -0.6
RCL1-209ENST00000473230 IQGAP2Q13576 1575 aa11.3□□□□□ -0.6
RCL1-209ENST00000473230 G3V3G9 751 aa11.29□□□□□ -0.6
RCL1-209ENST00000473230 FAM9AQ8IZU1 332 aaPredicted RBP11.28□□□□□ -0.6
RCL1-209ENST00000473230 TTBK1Q5TCY1 1321 aaPredicted RBP11.28□□□□□ -0.6
RCL1-209ENST00000473230 DPY19L2Q6NUT2 758 aa11.26□□□□□ -0.61
RCL1-209ENST00000473230 EEA1Q15075 1411 aa11.25□□□□□ -0.61
RCL1-209ENST00000473230 PRXQ9BXM0 1461 aa11.25□□□□□ -0.61
RCL1-209ENST00000473230 MAPKBP1O60336 1514 aa11.25□□□□□ -0.61
RCL1-209ENST00000473230 CHRM1P11229 460 aaPredicted RBP11.24□□□□□ -0.61
RCL1-209ENST00000473230 FAM69CQ0P6D2 419 aa11.24□□□□□ -0.61
RCL1-209ENST00000473230 UGGT2Q9NYU1 1516 aa11.24□□□□□ -0.61
RCL1-209ENST00000473230 ZNF710Q8N1W2 664 aa11.23□□□□□ -0.61
RCL1-209ENST00000473230 GOLGA3Q08378 1498 aa11.23□□□□□ -0.61
RCL1-209ENST00000473230 ABCC10Q5T3U5 1492 aa11.22□□□□□ -0.61
RCL1-209ENST00000473230 UACAQ9BZF9 1416 aa11.22□□□□□ -0.61
RCL1-209ENST00000473230 ADCY10Q96PN6 1610 aa11.21□□□□□ -0.61
RCL1-209ENST00000473230 ABCC2Q92887 1545 aa11.21□□□□□ -0.61
RCL1-209ENST00000473230 DISP1Q96F81 1524 aa11.21□□□□□ -0.61
RCL1-209ENST00000473230 PDAP1Q13442 181 aaKnown RBP11.21□□□□□ -0.61
RCL1-209ENST00000473230 CABP2Q9NPB3 220 aa11.21□□□□□ -0.61
RCL1-209ENST00000473230 BOLA1Q9Y3E2 137 aa11.21□□□□□ -0.61
RCL1-209ENST00000473230 UHRF1BP1LA0JNW5 1464 aa11.2□□□□□ -0.62
RCL1-209ENST00000473230 ERBB3P21860 1342 aa11.19□□□□□ -0.62
RCL1-209ENST00000473230 IFNLR1Q8IU57 520 aaPredicted RBP11.19□□□□□ -0.62
RCL1-209ENST00000473230 KIAA0556O60303 1618 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms