RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
NUDCD3-205ENST00000472246 SCAPERQ9BY12 1400 aa16.19■□□□□ 0.18
NUDCD3-205ENST00000472246 ILDR1Q86SU0 546 aaPredicted RBP16.18■□□□□ 0.18
NUDCD3-205ENST00000472246 PCF11O94913 1555 aaKnown RBP16.17■□□□□ 0.18
NUDCD3-205ENST00000472246 TROQ12816 1431 aaPredicted RBP16.17■□□□□ 0.18
NUDCD3-205ENST00000472246 CDK11AQ9UQ88 783 aaPredicted RBP16.16■□□□□ 0.18
NUDCD3-205ENST00000472246 MAGI2Q86UL8 1455 aa16.15■□□□□ 0.18
NUDCD3-205ENST00000472246 CLIP1P30622 1438 aa16.13■□□□□ 0.17
NUDCD3-205ENST00000472246 ARHGAP5Q13017 1502 aa16.13■□□□□ 0.17
NUDCD3-205ENST00000472246 EFCAB2Q5VUJ9 269 aa16.12■□□□□ 0.17
NUDCD3-205ENST00000472246 CASKIN1Q8WXD9 1431 aa16.11■□□□□ 0.17
NUDCD3-205ENST00000472246 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
NUDCD3-205ENST00000472246 MLECQ14165 292 aa16.1■□□□□ 0.17
NUDCD3-205ENST00000472246 CDC42BPBQ9Y5S2 1711 aa16.1■□□□□ 0.17
NUDCD3-205ENST00000472246 CCDC18Q5T9S5 1454 aa16.1■□□□□ 0.17
NUDCD3-205ENST00000472246 FER1L4A9Z1Z3 1794 aa16.09■□□□□ 0.17
NUDCD3-205ENST00000472246 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
NUDCD3-205ENST00000472246 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
NUDCD3-205ENST00000472246 ATP10AO60312 1499 aa16.08■□□□□ 0.16
NUDCD3-205ENST00000472246 ZNF518AQ6AHZ1 1483 aa16.08■□□□□ 0.16
NUDCD3-205ENST00000472246 KDM5CP41229 1560 aa16.08■□□□□ 0.16
NUDCD3-205ENST00000472246 PREX2Q70Z35 1606 aa16.08■□□□□ 0.16
NUDCD3-205ENST00000472246 FYCO1Q9BQS8 1478 aa16.06■□□□□ 0.16
NUDCD3-205ENST00000472246 AFAP1Q8N556 730 aa16.05■□□□□ 0.16
NUDCD3-205ENST00000472246 ABCC1P33527 1531 aa16.04■□□□□ 0.16
NUDCD3-205ENST00000472246 ARHGEF12Q9NZN5 1544 aa16.04■□□□□ 0.16
NUDCD3-205ENST00000472246 DIP2CQ9Y2E4 1556 aa16.04■□□□□ 0.16
NUDCD3-205ENST00000472246 CDC42BPAQ5VT25 1732 aa16.03■□□□□ 0.16
NUDCD3-205ENST00000472246 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
NUDCD3-205ENST00000472246 ABCA6Q8N139 1617 aa16.02■□□□□ 0.16
NUDCD3-205ENST00000472246 TRAPPC8Q9Y2L5 1435 aa16.02■□□□□ 0.15
NUDCD3-205ENST00000472246 HSPA2P54652 639 aa16■□□□□ 0.15
NUDCD3-205ENST00000472246 MYT1LQ9UL68 1186 aa16■□□□□ 0.15
NUDCD3-205ENST00000472246 MLH3Q9UHC1 1453 aa15.99■□□□□ 0.15
NUDCD3-205ENST00000472246 REREQ9P2R6 1566 aa15.98■□□□□ 0.15
NUDCD3-205ENST00000472246 SAMD9LQ8IVG5 1584 aa15.96■□□□□ 0.15
NUDCD3-205ENST00000472246 KIDINS220Q9ULH0 1771 aa15.96■□□□□ 0.15
NUDCD3-205ENST00000472246 GPATCH8Q9UKJ3 1502 aaKnown RBP15.95■□□□□ 0.14
NUDCD3-205ENST00000472246 CEBPAP49715 358 aaPredicted RBP15.95■□□□□ 0.14
NUDCD3-205ENST00000472246 PREX1Q8TCU6 1659 aa15.95■□□□□ 0.14
NUDCD3-205ENST00000472246 SYCP2Q9BX26 1530 aa15.94■□□□□ 0.14
NUDCD3-205ENST00000472246 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
NUDCD3-205ENST00000472246 AGLP35573 1532 aa15.92■□□□□ 0.14
NUDCD3-205ENST00000472246 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
NUDCD3-205ENST00000472246 C3P01024 1663 aa15.9■□□□□ 0.14
NUDCD3-205ENST00000472246 MTUS2Q5JR59 1369 aa15.88■□□□□ 0.13
NUDCD3-205ENST00000472246 CEP162Q5TB80 1403 aa15.88■□□□□ 0.13
NUDCD3-205ENST00000472246 HNRNPMP52272 730 aaKnown RBP eCLIP15.88■□□□□ 0.132e-6■■■□□ 19
NUDCD3-205ENST00000472246 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
NUDCD3-205ENST00000472246 EHBP1L1Q8N3D4 1523 aa15.87■□□□□ 0.13
NUDCD3-205ENST00000472246 TIAM1Q13009 1591 aa15.87■□□□□ 0.13
NUDCD3-205ENST00000472246 INO80Q9ULG1 1556 aaPredicted RBP15.87■□□□□ 0.13
NUDCD3-205ENST00000472246 UHRF1BP1Q6BDS2 1440 aa15.86■□□□□ 0.13
NUDCD3-205ENST00000472246 ATP7AQ04656 1500 aa15.86■□□□□ 0.13
NUDCD3-205ENST00000472246 CFDP1Q9UEE9 299 aaPredicted RBP15.86■□□□□ 0.13
NUDCD3-205ENST00000472246 SPAG9O60271 1321 aaKnown RBP15.86■□□□□ 0.13
NUDCD3-205ENST00000472246 SUPT6HQ7KZ85 1726 aaKnown RBP15.85■□□□□ 0.13
NUDCD3-205ENST00000472246 KIAA1107Q9UPP5 1409 aa15.85■□□□□ 0.13
NUDCD3-205ENST00000472246 PLEKHH2Q8IVE3 1493 aa15.84■□□□□ 0.13
NUDCD3-205ENST00000472246 STRCQ7RTU9 1775 aa15.83■□□□□ 0.12
NUDCD3-205ENST00000472246 ESF1Q9H501 851 aaKnown RBP15.83■□□□□ 0.12
NUDCD3-205ENST00000472246 PLXNC1O60486 1568 aa15.83■□□□□ 0.12
NUDCD3-205ENST00000472246 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
NUDCD3-205ENST00000472246 ZNF644Q9H582 1327 aaPredicted RBP15.81■□□□□ 0.12
NUDCD3-205ENST00000472246 CNTLNQ9NXG0 1405 aa15.81■□□□□ 0.12
NUDCD3-205ENST00000472246 A2MP01023 1474 aa15.8■□□□□ 0.12
NUDCD3-205ENST00000472246 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
NUDCD3-205ENST00000472246 MBD5Q9P267 1494 aa15.78■□□□□ 0.12
NUDCD3-205ENST00000472246 CLTCQ00610 1675 aaKnown RBP15.78■□□□□ 0.12
NUDCD3-205ENST00000472246 CERKQ8TCT0 537 aa15.77■□□□□ 0.12
NUDCD3-205ENST00000472246 ADGBQ8N7X0 1667 aa15.76■□□□□ 0.11
NUDCD3-205ENST00000472246 NCOA2Q15596 1464 aa15.76■□□□□ 0.11
NUDCD3-205ENST00000472246 ZMYM3Q14202 1370 aa15.75■□□□□ 0.11
NUDCD3-205ENST00000472246 NPATQ14207 1427 aa15.74■□□□□ 0.11
NUDCD3-205ENST00000472246 CAMSAP2Q08AD1 1489 aa15.73■□□□□ 0.11
NUDCD3-205ENST00000472246 GGT6Q6P531 493 aa15.73■□□□□ 0.11
NUDCD3-205ENST00000472246 LOC105371045A0A1W2PR82 267 aa15.72■□□□□ 0.11
NUDCD3-205ENST00000472246 DMRT2Q9Y5R5 561 aa15.72■□□□□ 0.11
NUDCD3-205ENST00000472246 MYO3AQ8NEV4 1616 aa15.72■□□□□ 0.11
NUDCD3-205ENST00000472246 CCDC141Q6ZP82 1450 aa15.71■□□□□ 0.11
NUDCD3-205ENST00000472246 NCOA1Q15788 1441 aa15.71■□□□□ 0.11
NUDCD3-205ENST00000472246 CAMSAP1Q5T5Y3 1602 aa15.71■□□□□ 0.11
NUDCD3-205ENST00000472246 RTEL1-TNFRSF6BF6WH68 1400 aa15.7■□□□□ 0.1
NUDCD3-205ENST00000472246 PTPRTO14522 1441 aa15.7■□□□□ 0.1
NUDCD3-205ENST00000472246 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
NUDCD3-205ENST00000472246 PTPRKQ15262 1439 aa15.69■□□□□ 0.1
NUDCD3-205ENST00000472246 ZNF142P52746 1687 aaPredicted RBP15.69■□□□□ 0.1
NUDCD3-205ENST00000472246 LRRC9Q6ZRR7 1453 aa15.68■□□□□ 0.1
NUDCD3-205ENST00000472246 CEP170BQ9Y4F5 1589 aaPredicted RBP15.67■□□□□ 0.1
NUDCD3-205ENST00000472246 DHX29Q7Z478 1369 aaKnown RBP15.67■□□□□ 0.1
NUDCD3-205ENST00000472246 ARHGEF5Q12774 1597 aa15.66■□□□□ 0.1
NUDCD3-205ENST00000472246 LTBP4Q8N2S1 1624 aa15.65■□□□□ 0.1
NUDCD3-205ENST00000472246 KIF3BO15066 747 aa15.63■□□□□ 0.09
NUDCD3-205ENST00000472246 KANK4Q5T7N3 995 aaPredicted RBP15.63■□□□□ 0.09
NUDCD3-205ENST00000472246 PPP6R1Q9UPN7 881 aa15.63■□□□□ 0.09
NUDCD3-205ENST00000472246 NCKAP5LQ9HCH0 1330 aa15.63■□□□□ 0.09
NUDCD3-205ENST00000472246 KDM5DQ9BY66 1539 aa15.63■□□□□ 0.09
NUDCD3-205ENST00000472246 PLA2R1Q13018 1463 aa15.61■□□□□ 0.09
NUDCD3-205ENST00000472246 RSPH4AQ5TD94 716 aa15.61■□□□□ 0.09
NUDCD3-205ENST00000472246 A2ML1A8K2U0 1454 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms