RNA–Protein interactions for RNA: ENST00000472246.5

NUDCD3-205, Transcript of NudC domain containing 3, humanhuman

TSL 4

Gene NUDCD3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-205ENST00000472246 NISCHQ9Y2I1 1504 aa24.71■■□□□ 1.55
NUDCD3-205ENST00000472246 CCDC180Q9P1Z9 1646 aa22.16■■□□□ 1.14
NUDCD3-205ENST00000472246 ABCC9O60706 1549 aa22.16■■□□□ 1.14
NUDCD3-205ENST00000472246 RB1CC1Q8TDY2 1594 aa21.07■□□□□ 0.96
NUDCD3-205ENST00000472246 NACADO15069 1562 aa20.93■□□□□ 0.94
NUDCD3-205ENST00000472246 DCAF8L2P0C7V8 631 aa20.82■□□□□ 0.92
NUDCD3-205ENST00000472246 DNAJC5BQ9UF47 199 aa20.73■□□□□ 0.91
NUDCD3-205ENST00000472246 UNC13AQ9UPW8 1703 aa20.64■□□□□ 0.9
NUDCD3-205ENST00000472246 MYO15BQ96JP2 1530 aa20.62■□□□□ 0.89
NUDCD3-205ENST00000472246 PABPN1Q86U42 306 aaKnown RBP eCLIP20.61■□□□□ 0.89
NUDCD3-205ENST00000472246 ZCCHC6Q5VYS8 1495 aaKnown RBP20.5■□□□□ 0.87
NUDCD3-205ENST00000472246 BICRAQ9NZM4 1560 aa20.49■□□□□ 0.87
NUDCD3-205ENST00000472246 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
NUDCD3-205ENST00000472246 SCRIBQ14160 1630 aa20.24■□□□□ 0.83
NUDCD3-205ENST00000472246 SHROOM4Q9ULL8 1493 aa20.16■□□□□ 0.82
NUDCD3-205ENST00000472246 CC2D2AQ9P2K1 1620 aa20.01■□□□□ 0.79
NUDCD3-205ENST00000472246 EIF4G1Q04637 1599 aaKnown RBP19.98■□□□□ 0.79
NUDCD3-205ENST00000472246 CECR2Q9BXF3 1484 aa19.93■□□□□ 0.78
NUDCD3-205ENST00000472246 NCAPD3P42695 1498 aa19.31■□□□□ 0.68
NUDCD3-205ENST00000472246 SMARCA4P51532 1647 aa19.29■□□□□ 0.68
NUDCD3-205ENST00000472246 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
NUDCD3-205ENST00000472246 SMARCA2P51531 1590 aa19.21■□□□□ 0.67
NUDCD3-205ENST00000472246 HMGXB3Q12766 1538 aa19.2■□□□□ 0.66
NUDCD3-205ENST00000472246 BAZ1AQ9NRL2 1556 aaPredicted RBP19.17■□□□□ 0.66
NUDCD3-205ENST00000472246 ERCC6Q03468 1493 aa19.1■□□□□ 0.65
NUDCD3-205ENST00000472246 BAZ1BQ9UIG0 1483 aaKnown RBP19.09■□□□□ 0.65
NUDCD3-205ENST00000472246 PEG3Q9GZU2 1588 aa19.07■□□□□ 0.64
NUDCD3-205ENST00000472246 MROH2BQ7Z745 1585 aa19.06■□□□□ 0.64
NUDCD3-205ENST00000472246 NESP48681 1621 aa19.05■□□□□ 0.64
NUDCD3-205ENST00000472246 CUX2O14529 1486 aa19.04■□□□□ 0.64
NUDCD3-205ENST00000472246 DNAJC5Q9H3Z4 198 aa18.97■□□□□ 0.63
NUDCD3-205ENST00000472246 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.61
NUDCD3-205ENST00000472246 THOC2Q8NI27 1593 aaKnown RBP18.86■□□□□ 0.61
NUDCD3-205ENST00000472246 WIZO95785 1651 aa18.85■□□□□ 0.61
NUDCD3-205ENST00000472246 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
NUDCD3-205ENST00000472246 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
NUDCD3-205ENST00000472246 CADPSQ9ULU8 1353 aa18.72■□□□□ 0.59
NUDCD3-205ENST00000472246 RSF1Q96T23 1441 aaPredicted RBP18.66■□□□□ 0.58
NUDCD3-205ENST00000472246 MRC2Q9UBG0 1479 aa18.62■□□□□ 0.57
NUDCD3-205ENST00000472246 WDR62O43379 1518 aa18.59■□□□□ 0.57
NUDCD3-205ENST00000472246 TOP2AP11388 1531 aaKnown RBP18.59■□□□□ 0.57
NUDCD3-205ENST00000472246 CEP164Q9UPV0 1460 aa18.55■□□□□ 0.56
NUDCD3-205ENST00000472246 FANCD2Q9BXW9 1451 aa18.54■□□□□ 0.56
NUDCD3-205ENST00000472246 CFTRP13569 1480 aa18.53■□□□□ 0.56
NUDCD3-205ENST00000472246 URB2Q14146 1524 aaKnown RBP18.39■□□□□ 0.54
NUDCD3-205ENST00000472246 PRDM2Q13029 1718 aa18.38■□□□□ 0.53
NUDCD3-205ENST00000472246 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
NUDCD3-205ENST00000472246 TRIM41Q8WV44 630 aa18.2■□□□□ 0.5
NUDCD3-205ENST00000472246 TOPBP1Q92547 1522 aa18.19■□□□□ 0.5
NUDCD3-205ENST00000472246 ZNF608Q9ULD9 1512 aaPredicted RBP18.17■□□□□ 0.5
NUDCD3-205ENST00000472246 IFT140Q96RY7 1462 aa18.16■□□□□ 0.5
NUDCD3-205ENST00000472246 OSCARQ8IYS5 282 aa18.14■□□□□ 0.49
NUDCD3-205ENST00000472246 DNMBPQ6XZF7 1577 aa18.13■□□□□ 0.49
NUDCD3-205ENST00000472246 ABCC8Q09428 1581 aa18.1■□□□□ 0.49
NUDCD3-205ENST00000472246 EIF4G3O43432 1585 aaKnown RBP18.08■□□□□ 0.49
NUDCD3-205ENST00000472246 TARBP1Q13395 1621 aaKnown RBP18.04■□□□□ 0.48
NUDCD3-205ENST00000472246 POLA1P09884 1462 aaPredicted RBP18.01■□□□□ 0.47
NUDCD3-205ENST00000472246 AQRO60306 1485 aaKnown RBP eCLIP17.99■□□□□ 0.47
NUDCD3-205ENST00000472246 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
NUDCD3-205ENST00000472246 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
NUDCD3-205ENST00000472246 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
NUDCD3-205ENST00000472246 RAD54L2Q9Y4B4 1467 aa17.96■□□□□ 0.47
NUDCD3-205ENST00000472246 CHD1O14646 1710 aa17.95■□□□□ 0.46
NUDCD3-205ENST00000472246 ARHGEF11O15085 1522 aa17.92■□□□□ 0.46
NUDCD3-205ENST00000472246 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
NUDCD3-205ENST00000472246 CUX1P39880 1505 aa17.91■□□□□ 0.46
NUDCD3-205ENST00000472246 SOGA1O94964 1423 aa17.9■□□□□ 0.46
NUDCD3-205ENST00000472246 TDRD9Q8NDG6 1382 aaKnown RBP17.88■□□□□ 0.45
NUDCD3-205ENST00000472246 SUPT5HO00267 1087 aaKnown RBP17.85■□□□□ 0.45
NUDCD3-205ENST00000472246 FBLN2P98095 1184 aa17.85■□□□□ 0.45
NUDCD3-205ENST00000472246 WDR97A6NE52 1622 aa17.83■□□□□ 0.44
NUDCD3-205ENST00000472246 SNAPC4Q5SXM2 1469 aa17.82■□□□□ 0.44
NUDCD3-205ENST00000472246 ARAP1Q96P48 1450 aa17.75■□□□□ 0.43
NUDCD3-205ENST00000472246 CYB5RLQ6IPT4 315 aa17.75■□□□□ 0.43
NUDCD3-205ENST00000472246 GRIN2BQ13224 1484 aa17.75■□□□□ 0.43
NUDCD3-205ENST00000472246 MAGI1Q96QZ7 1491 aaPredicted RBP17.75■□□□□ 0.43
NUDCD3-205ENST00000472246 PBRM1Q86U86 1689 aa17.74■□□□□ 0.43
NUDCD3-205ENST00000472246 CLASP1Q7Z460 1538 aa17.72■□□□□ 0.43
NUDCD3-205ENST00000472246 GAPVD1Q14C86 1478 aa17.7■□□□□ 0.42
NUDCD3-205ENST00000472246 CHMP7Q8WUX9 453 aaPredicted RBP17.7■□□□□ 0.42
NUDCD3-205ENST00000472246 SYNJ1O43426 1573 aa17.7■□□□□ 0.42
NUDCD3-205ENST00000472246 SYNJ2O15056 1496 aa17.69■□□□□ 0.42
NUDCD3-205ENST00000472246 ABCA10Q8WWZ4 1543 aa17.69■□□□□ 0.42
NUDCD3-205ENST00000472246 ABCA5Q8WWZ7 1642 aa17.69■□□□□ 0.42
NUDCD3-205ENST00000472246 BIVM-ERCC5R4GMW8 1640 aa17.62■□□□□ 0.41
NUDCD3-205ENST00000472246 TOP2BQ02880 1626 aa17.61■□□□□ 0.41
NUDCD3-205ENST00000472246 WRNQ14191 1432 aaPredicted RBP eCLIP17.61■□□□□ 0.41
NUDCD3-205ENST00000472246 ADAMTS12P58397 1594 aa17.56■□□□□ 0.4
NUDCD3-205ENST00000472246 TRHP20396 242 aaPredicted RBP17.54■□□□□ 0.4
NUDCD3-205ENST00000472246 GRIN2AQ12879 1464 aa17.54■□□□□ 0.4
NUDCD3-205ENST00000472246 CEP170Q5SW79 1584 aa17.5■□□□□ 0.39
NUDCD3-205ENST00000472246 ERCC6L2Q5T890 1561 aa17.48■□□□□ 0.39
NUDCD3-205ENST00000472246 NUP160Q12769 1436 aa17.47■□□□□ 0.39
NUDCD3-205ENST00000472246 ERICH3Q5RHP9 1530 aa17.47■□□□□ 0.39
NUDCD3-205ENST00000472246 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
NUDCD3-205ENST00000472246 SHROOM2Q13796 1616 aa17.4■□□□□ 0.38
NUDCD3-205ENST00000472246 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
NUDCD3-205ENST00000472246 PRG4Q92954 1404 aaPredicted RBP17.3■□□□□ 0.36
NUDCD3-205ENST00000472246 JPH4Q96JJ6 628 aa17.26■□□□□ 0.35
NUDCD3-205ENST00000472246 KIF27Q86VH2 1401 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 111.4 ms