RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 KCNH8Q96L42 1107 aa20.61■□□□□ 0.89
CCNL1-213ENST00000471044 MAGI3Q5TCQ9 1506 aa20.6■□□□□ 0.89
CCNL1-213ENST00000471044 NUP153P49790 1475 aaKnown RBP20.6■□□□□ 0.89
CCNL1-213ENST00000471044 CD109Q6YHK3 1445 aa20.6■□□□□ 0.89
CCNL1-213ENST00000471044 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
CCNL1-213ENST00000471044 UBTFP17480 764 aaKnown RBP20.59■□□□□ 0.89
CCNL1-213ENST00000471044 ABCA9Q8IUA7 1624 aa20.56■□□□□ 0.88
CCNL1-213ENST00000471044 EHMT2Q96KQ7 1210 aa20.55■□□□□ 0.88
CCNL1-213ENST00000471044 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
CCNL1-213ENST00000471044 FMN1Q68DA7 1419 aa20.47■□□□□ 0.87
CCNL1-213ENST00000471044 RBM42Q9BTD8 480 aaKnown RBP20.47■□□□□ 0.87
CCNL1-213ENST00000471044 ZBTB12Q9Y330 459 aaPredicted RBP20.46■□□□□ 0.87
CCNL1-213ENST00000471044 PLEKHD1A6NEE1 506 aa20.45■□□□□ 0.86
CCNL1-213ENST00000471044 HECW1Q76N89 1606 aa20.45■□□□□ 0.86
CCNL1-213ENST00000471044 ARAP3Q8WWN8 1544 aa20.44■□□□□ 0.86
CCNL1-213ENST00000471044 PHLDB1Q86UU1 1377 aa20.42■□□□□ 0.86
CCNL1-213ENST00000471044 CDK13Q14004 1512 aaKnown RBP20.42■□□□□ 0.86
CCNL1-213ENST00000471044 NEO1Q92859 1461 aa20.39■□□□□ 0.85
CCNL1-213ENST00000471044 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.38■□□□□ 0.852e-6■■□□□ 13.5
CCNL1-213ENST00000471044 LRRIQ1Q96JM4 1722 aa20.38■□□□□ 0.85
CCNL1-213ENST00000471044 TTC37Q6PGP7 1564 aa20.35■□□□□ 0.85
CCNL1-213ENST00000471044 CFAP74Q9C0B2 1584 aa20.34■□□□□ 0.85
CCNL1-213ENST00000471044 ATP1B4Q9UN42 357 aaPredicted RBP20.33■□□□□ 0.85
CCNL1-213ENST00000471044 PCF11O94913 1555 aaKnown RBP20.29■□□□□ 0.84
CCNL1-213ENST00000471044 CDK11AQ9UQ88 783 aaPredicted RBP20.29■□□□□ 0.84
CCNL1-213ENST00000471044 FRMPD1Q5SYB0 1578 aa20.29■□□□□ 0.84
CCNL1-213ENST00000471044 RICTORQ6R327 1708 aa20.28■□□□□ 0.84
CCNL1-213ENST00000471044 MYO5CQ9NQX4 1742 aa20.28■□□□□ 0.84
CCNL1-213ENST00000471044 FANCAO15360 1455 aa20.28■□□□□ 0.84
CCNL1-213ENST00000471044 AKNAQ7Z591 1439 aa20.27■□□□□ 0.84
CCNL1-213ENST00000471044 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.84
CCNL1-213ENST00000471044 FBXO41Q8TF61 875 aa20.27■□□□□ 0.84
CCNL1-213ENST00000471044 CLIP1P30622 1438 aa20.26■□□□□ 0.83
CCNL1-213ENST00000471044 KIF14Q15058 1648 aa20.25■□□□□ 0.83
CCNL1-213ENST00000471044 RAPGEF3O95398 923 aa20.25■□□□□ 0.83
CCNL1-213ENST00000471044 TROQ12816 1431 aaPredicted RBP20.25■□□□□ 0.83
CCNL1-213ENST00000471044 CCDC18Q5T9S5 1454 aa20.24■□□□□ 0.83
CCNL1-213ENST00000471044 PLCH2O75038 1416 aa20.24■□□□□ 0.83
CCNL1-213ENST00000471044 DENND4BO75064 1496 aaPredicted RBP20.24■□□□□ 0.83
CCNL1-213ENST00000471044 FYCO1Q9BQS8 1478 aa20.21■□□□□ 0.83
CCNL1-213ENST00000471044 ADAMTSL3P82987 1691 aa20.18■□□□□ 0.82
CCNL1-213ENST00000471044 PTPRMP28827 1452 aa20.18■□□□□ 0.82
CCNL1-213ENST00000471044 ZMYM4Q5VZL5 1548 aa20.17■□□□□ 0.82
CCNL1-213ENST00000471044 CDC42BPBQ9Y5S2 1711 aa20.17■□□□□ 0.82
CCNL1-213ENST00000471044 ARHGEF40Q8TER5 1519 aa20.17■□□□□ 0.82
CCNL1-213ENST00000471044 POTEHQ6S545 545 aa20.15■□□□□ 0.82
CCNL1-213ENST00000471044 SCAPERQ9BY12 1400 aa20.14■□□□□ 0.81
CCNL1-213ENST00000471044 EFCAB2Q5VUJ9 269 aa20.14■□□□□ 0.81
CCNL1-213ENST00000471044 BCORL1Q5H9F3 1711 aa20.13■□□□□ 0.81
CCNL1-213ENST00000471044 PREX2Q70Z35 1606 aa20.13■□□□□ 0.81
CCNL1-213ENST00000471044 ARHGAP5Q13017 1502 aa20.12■□□□□ 0.81
CCNL1-213ENST00000471044 MAGI2Q86UL8 1455 aa20.11■□□□□ 0.81
CCNL1-213ENST00000471044 CDC42BPAQ5VT25 1732 aa20.11■□□□□ 0.81
CCNL1-213ENST00000471044 POGZQ7Z3K3 1410 aa20.1■□□□□ 0.81
CCNL1-213ENST00000471044 ZFYVE16Q7Z3T8 1539 aa20.1■□□□□ 0.81
CCNL1-213ENST00000471044 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
CCNL1-213ENST00000471044 MADDQ8WXG6 1647 aa20.09■□□□□ 0.81
CCNL1-213ENST00000471044 AKT1S1Q96B36 256 aa20.08■□□□□ 0.81
CCNL1-213ENST00000471044 YEATS2Q9ULM3 1422 aa20.06■□□□□ 0.8
CCNL1-213ENST00000471044 SIGLEC1Q9BZZ2 1709 aa20.05■□□□□ 0.8
CCNL1-213ENST00000471044 ZNF518AQ6AHZ1 1483 aa20.05■□□□□ 0.8
CCNL1-213ENST00000471044 LMTK3Q96Q04 1460 aa20.05■□□□□ 0.8
CCNL1-213ENST00000471044 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
CCNL1-213ENST00000471044 KDM5CP41229 1560 aa20.04■□□□□ 0.8
CCNL1-213ENST00000471044 ITSN2Q9NZM3 1697 aa20.03■□□□□ 0.8
CCNL1-213ENST00000471044 ABCC1P33527 1531 aa20.02■□□□□ 0.79
CCNL1-213ENST00000471044 RIMS1Q86UR5 1692 aaKnown RBP20.01■□□□□ 0.79
CCNL1-213ENST00000471044 MKRN4PQ13434 485 aaPredicted RBP20■□□□□ 0.79
CCNL1-213ENST00000471044 ATP10AO60312 1499 aa19.99■□□□□ 0.79
CCNL1-213ENST00000471044 ARHGEF12Q9NZN5 1544 aa19.97■□□□□ 0.79
CCNL1-213ENST00000471044 GPATCH8Q9UKJ3 1502 aaKnown RBP19.97■□□□□ 0.79
CCNL1-213ENST00000471044 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
CCNL1-213ENST00000471044 AFAP1Q8N556 730 aa19.97■□□□□ 0.79
CCNL1-213ENST00000471044 EHBP1L1Q8N3D4 1523 aa19.97■□□□□ 0.79
CCNL1-213ENST00000471044 MTUS2Q5JR59 1369 aa19.96■□□□□ 0.79
CCNL1-213ENST00000471044 SAMD9LQ8IVG5 1584 aa19.96■□□□□ 0.79
CCNL1-213ENST00000471044 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
CCNL1-213ENST00000471044 TRAPPC8Q9Y2L5 1435 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 MLH3Q9UHC1 1453 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 FER1L4A9Z1Z3 1794 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 HSPA2P54652 639 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 CHRDL2Q6WN34 429 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 DIP2CQ9Y2E4 1556 aa19.94■□□□□ 0.78
CCNL1-213ENST00000471044 ABCA6Q8N139 1617 aa19.93■□□□□ 0.78
CCNL1-213ENST00000471044 REREQ9P2R6 1566 aa19.92■□□□□ 0.78
CCNL1-213ENST00000471044 KIDINS220Q9ULH0 1771 aa19.92■□□□□ 0.78
CCNL1-213ENST00000471044 CCNB3Q8WWL7 1395 aa19.92■□□□□ 0.78
CCNL1-213ENST00000471044 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
CCNL1-213ENST00000471044 REM2Q8IYK8 340 aaPredicted RBP19.9■□□□□ 0.78
CCNL1-213ENST00000471044 SYCP2Q9BX26 1530 aa19.9■□□□□ 0.78
CCNL1-213ENST00000471044 VPS8Q8N3P4 1428 aa19.89■□□□□ 0.77
CCNL1-213ENST00000471044 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.77
CCNL1-213ENST00000471044 ZNF777Q9ULD5 760 aaPredicted RBP19.89■□□□□ 0.77
CCNL1-213ENST00000471044 PLEKHH2Q8IVE3 1493 aa19.88■□□□□ 0.77
CCNL1-213ENST00000471044 SUPT6HQ7KZ85 1726 aaKnown RBP19.88■□□□□ 0.77
CCNL1-213ENST00000471044 KIAA1107Q9UPP5 1409 aa19.87■□□□□ 0.77
CCNL1-213ENST00000471044 SPDYE2BA6NHP3 402 aa19.87■□□□□ 0.77
CCNL1-213ENST00000471044 SPDYE6P0CI01 402 aa19.87■□□□□ 0.77
CCNL1-213ENST00000471044 SPDYE2Q495Y8 402 aa19.87■□□□□ 0.77
CCNL1-213ENST00000471044 CFDP1Q9UEE9 299 aaPredicted RBP19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms