RNA–Protein interactions for RNA: ENST00000470835.1

LMNA-212, Transcript of lamin A/C, humanhuman

TSL 3

Gene LMNA, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-212ENST00000470835 CDK11AQ9UQ88 783 aaPredicted RBP28.42■■■□□ 2.14
LMNA-212ENST00000470835 TROQ12816 1431 aaPredicted RBP28.41■■■□□ 2.14
LMNA-212ENST00000470835 POGZQ7Z3K3 1410 aa28.41■■■□□ 2.14
LMNA-212ENST00000470835 MAGI2Q86UL8 1455 aa28.4■■■□□ 2.14
LMNA-212ENST00000470835 SCAPERQ9BY12 1400 aa28.39■■■□□ 2.14
LMNA-212ENST00000470835 YEATS2Q9ULM3 1422 aa28.39■■■□□ 2.14
LMNA-212ENST00000470835 CLIP1P30622 1438 aa28.38■■■□□ 2.13
LMNA-212ENST00000470835 ARHGAP5Q13017 1502 aa28.34■■■□□ 2.13
LMNA-212ENST00000470835 CCDC18Q5T9S5 1454 aa28.33■■■□□ 2.13
LMNA-212ENST00000470835 CDC42BPBQ9Y5S2 1711 aa28.32■■■□□ 2.12
LMNA-212ENST00000470835 CASKIN1Q8WXD9 1431 aa28.32■■■□□ 2.12
LMNA-212ENST00000470835 EFCAB2Q5VUJ9 269 aa28.31■■■□□ 2.12
LMNA-212ENST00000470835 FER1L4A9Z1Z3 1794 aa28.31■■■□□ 2.12
LMNA-212ENST00000470835 PREX2Q70Z35 1606 aa28.29■■■□□ 2.12
LMNA-212ENST00000470835 ZNF518AQ6AHZ1 1483 aa28.27■■■□□ 2.12
LMNA-212ENST00000470835 ILDR1Q86SU0 546 aaPredicted RBP28.26■■■□□ 2.11
LMNA-212ENST00000470835 FYCO1Q9BQS8 1478 aa28.26■■■□□ 2.11
LMNA-212ENST00000470835 KDM5CP41229 1560 aa28.25■■■□□ 2.11
LMNA-212ENST00000470835 ATP10AO60312 1499 aa28.23■■■□□ 2.11
LMNA-212ENST00000470835 LMTK3Q96Q04 1460 aa28.23■■■□□ 2.11
LMNA-212ENST00000470835 C9orf84Q5VXU9 1444 aa28.23■■■□□ 2.11
LMNA-212ENST00000470835 CDC42BPAQ5VT25 1732 aa28.22■■■□□ 2.11
LMNA-212ENST00000470835 ITSN2Q9NZM3 1697 aa28.19■■■□□ 2.1
LMNA-212ENST00000470835 ABCC1P33527 1531 aa28.19■■■□□ 2.1
LMNA-212ENST00000470835 MLECQ14165 292 aa28.17■■■□□ 2.1
LMNA-212ENST00000470835 ARHGEF12Q9NZN5 1544 aa28.17■■■□□ 2.1
LMNA-212ENST00000470835 DIP2CQ9Y2E4 1556 aa28.16■■■□□ 2.1
LMNA-212ENST00000470835 ABCA6Q8N139 1617 aa28.14■■■□□ 2.1
LMNA-212ENST00000470835 PLPPR3Q6T4P5 718 aa28.14■■■□□ 2.1
LMNA-212ENST00000470835 AFAP1Q8N556 730 aa28.13■■■□□ 2.09
LMNA-212ENST00000470835 REREQ9P2R6 1566 aa28.11■■■□□ 2.09
LMNA-212ENST00000470835 MLH3Q9UHC1 1453 aa28.08■■■□□ 2.09
LMNA-212ENST00000470835 MYT1LQ9UL68 1186 aa28.08■■■□□ 2.09
LMNA-212ENST00000470835 TRAPPC8Q9Y2L5 1435 aa28.08■■■□□ 2.09
LMNA-212ENST00000470835 SAMD9LQ8IVG5 1584 aa28.05■■■□□ 2.08
LMNA-212ENST00000470835 PREX1Q8TCU6 1659 aa28.05■■■□□ 2.08
LMNA-212ENST00000470835 KIDINS220Q9ULH0 1771 aa28.05■■■□□ 2.08
LMNA-212ENST00000470835 SYCP2Q9BX26 1530 aa28.01■■■□□ 2.07
LMNA-212ENST00000470835 HSPA2P54652 639 aa28■■■□□ 2.07
LMNA-212ENST00000470835 GPATCH8Q9UKJ3 1502 aaKnown RBP27.99■■■□□ 2.07
LMNA-212ENST00000470835 AGLP35573 1532 aa27.98■■■□□ 2.07
LMNA-212ENST00000470835 C3P01024 1663 aa27.95■■■□□ 2.07
LMNA-212ENST00000470835 ZNF777Q9ULD5 760 aaPredicted RBP27.95■■■□□ 2.06
LMNA-212ENST00000470835 MTUS2Q5JR59 1369 aa27.93■■■□□ 2.06
LMNA-212ENST00000470835 CEBPAP49715 358 aaPredicted RBP27.92■■■□□ 2.06
LMNA-212ENST00000470835 SETD1BQ9UPS6 1966 aaKnown RBP27.91■■■□□ 2.06
LMNA-212ENST00000470835 CEP162Q5TB80 1403 aa27.91■■■□□ 2.06
LMNA-212ENST00000470835 CCNB3Q8WWL7 1395 aa27.9■■■□□ 2.06
LMNA-212ENST00000470835 EHBP1L1Q8N3D4 1523 aa27.9■■■□□ 2.06
LMNA-212ENST00000470835 TIAM1Q13009 1591 aa27.89■■■□□ 2.05
LMNA-212ENST00000470835 INO80Q9ULG1 1556 aaPredicted RBP27.89■■■□□ 2.05
LMNA-212ENST00000470835 PLEKHH2Q8IVE3 1493 aa27.89■■■□□ 2.05
LMNA-212ENST00000470835 SUPT6HQ7KZ85 1726 aaKnown RBP27.88■■■□□ 2.05
LMNA-212ENST00000470835 FBXO41Q8TF61 875 aa27.88■■■□□ 2.05
LMNA-212ENST00000470835 ATP7AQ04656 1500 aa27.87■■■□□ 2.05
LMNA-212ENST00000470835 CFDP1Q9UEE9 299 aaPredicted RBP27.86■■■□□ 2.05
LMNA-212ENST00000470835 KIAA1107Q9UPP5 1409 aa27.85■■■□□ 2.05
LMNA-212ENST00000470835 HNRNPMP52272 730 aaKnown RBP eCLIP27.84■■■□□ 2.05
LMNA-212ENST00000470835 SPAG9O60271 1321 aaKnown RBP27.84■■■□□ 2.05
LMNA-212ENST00000470835 UHRF1BP1Q6BDS2 1440 aa27.84■■■□□ 2.05
LMNA-212ENST00000470835 MROH2AA6NES4 1674 aa27.82■■■□□ 2.04
LMNA-212ENST00000470835 STRCQ7RTU9 1775 aa27.81■■■□□ 2.04
LMNA-212ENST00000470835 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
LMNA-212ENST00000470835 PLXNC1O60486 1568 aa27.81■■■□□ 2.04
LMNA-212ENST00000470835 CNTLNQ9NXG0 1405 aa27.8■■■□□ 2.04
LMNA-212ENST00000470835 ADGBQ8N7X0 1667 aa27.78■■■□□ 2.04
LMNA-212ENST00000470835 A2MP01023 1474 aa27.75■■■□□ 2.03
LMNA-212ENST00000470835 CLTCQ00610 1675 aaKnown RBP27.75■■■□□ 2.03
LMNA-212ENST00000470835 ZNF644Q9H582 1327 aaPredicted RBP27.71■■■□□ 2.03
LMNA-212ENST00000470835 MBD5Q9P267 1494 aa27.7■■■□□ 2.02
LMNA-212ENST00000470835 NCOA2Q15596 1464 aa27.68■■■□□ 2.02
LMNA-212ENST00000470835 NPATQ14207 1427 aa27.66■■■□□ 2.02
LMNA-212ENST00000470835 CAMSAP2Q08AD1 1489 aa27.64■■■□□ 2.02
LMNA-212ENST00000470835 ZMYM3Q14202 1370 aa27.63■■■□□ 2.01
LMNA-212ENST00000470835 CERKQ8TCT0 537 aa27.63■■■□□ 2.01
LMNA-212ENST00000470835 DMRT2Q9Y5R5 561 aa27.62■■■□□ 2.01
LMNA-212ENST00000470835 MYO3AQ8NEV4 1616 aa27.62■■■□□ 2.01
LMNA-212ENST00000470835 RTEL1-TNFRSF6BF6WH68 1400 aa27.61■■■□□ 2.01
LMNA-212ENST00000470835 VPS8Q8N3P4 1428 aa27.61■■■□□ 2.01
LMNA-212ENST00000470835 CCDC141Q6ZP82 1450 aa27.61■■■□□ 2.01
LMNA-212ENST00000470835 ZNF142P52746 1687 aaPredicted RBP27.6■■■□□ 2.01
LMNA-212ENST00000470835 GGT6Q6P531 493 aa27.58■■■□□ 2.01
LMNA-212ENST00000470835 NCOA1Q15788 1441 aa27.58■■■□□ 2
LMNA-212ENST00000470835 PTPRTO14522 1441 aa27.57■■■□□ 2
LMNA-212ENST00000470835 CAMSAP1Q5T5Y3 1602 aa27.56■■■□□ 2
LMNA-212ENST00000470835 LOC105371045A0A1W2PR82 267 aa27.55■■■□□ 2
LMNA-212ENST00000470835 LRRC9Q6ZRR7 1453 aa27.55■■■□□ 2
LMNA-212ENST00000470835 ARHGEF5Q12774 1597 aa27.55■■■□□ 2
LMNA-212ENST00000470835 PTPRKQ15262 1439 aa27.53■■■□□ 2
LMNA-212ENST00000470835 CEP170BQ9Y4F5 1589 aaPredicted RBP27.52■■■□□ 2
LMNA-212ENST00000470835 DHX29Q7Z478 1369 aaKnown RBP27.51■■□□□ 1.99
LMNA-212ENST00000470835 PPP6R1Q9UPN7 881 aa27.49■■□□□ 1.99
LMNA-212ENST00000470835 MAP3K1Q13233 1512 aa27.48■■□□□ 1.99
LMNA-212ENST00000470835 RSPH4AQ5TD94 716 aa27.46■■□□□ 1.99
LMNA-212ENST00000470835 KDM5DQ9BY66 1539 aa27.46■■□□□ 1.99
LMNA-212ENST00000470835 FAM135AQ9P2D6 1515 aa27.46■■□□□ 1.99
LMNA-212ENST00000470835 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
LMNA-212ENST00000470835 PLA2R1Q13018 1463 aa27.43■■□□□ 1.98
LMNA-212ENST00000470835 MAST1Q9Y2H9 1570 aa27.43■■□□□ 1.98
LMNA-212ENST00000470835 KIF3BO15066 747 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms