RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 MYO5CQ9NQX4 1742 aa24.44■■□□□ 1.5
FDPS-208ENST00000470171 ZMYM4Q5VZL5 1548 aa24.44■■□□□ 1.5
FDPS-208ENST00000470171 ZNF518AQ6AHZ1 1483 aa24.44■■□□□ 1.5
FDPS-208ENST00000470171 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
FDPS-208ENST00000470171 LRRIQ1Q96JM4 1722 aa24.42■■□□□ 1.5
FDPS-208ENST00000470171 CFDP1Q9UEE9 299 aaPredicted RBP24.4■■□□□ 1.5
FDPS-208ENST00000470171 FRMPD1Q5SYB0 1578 aa24.4■■□□□ 1.5
FDPS-208ENST00000470171 EHBP1L1Q8N3D4 1523 aa24.39■■□□□ 1.49
FDPS-208ENST00000470171 GPATCH8Q9UKJ3 1502 aaKnown RBP24.39■■□□□ 1.49
FDPS-208ENST00000470171 PLEKHH2Q8IVE3 1493 aa24.38■■□□□ 1.49
FDPS-208ENST00000470171 MAP3K1Q13233 1512 aa24.37■■□□□ 1.49
FDPS-208ENST00000470171 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
FDPS-208ENST00000470171 ARID4BQ4LE39 1312 aaPredicted RBP24.35■■□□□ 1.49
FDPS-208ENST00000470171 RICTORQ6R327 1708 aa24.35■■□□□ 1.49
FDPS-208ENST00000470171 PREX2Q70Z35 1606 aa24.35■■□□□ 1.49
FDPS-208ENST00000470171 ZFYVE16Q7Z3T8 1539 aa24.35■■□□□ 1.49
FDPS-208ENST00000470171 ARHGEF40Q8TER5 1519 aa24.35■■□□□ 1.49
FDPS-208ENST00000470171 APLP2Q06481 763 aa24.34■■□□□ 1.49
FDPS-208ENST00000470171 AFAP1Q8N556 730 aa24.34■■□□□ 1.49
FDPS-208ENST00000470171 ATP10AO60312 1499 aa24.32■■□□□ 1.48
FDPS-208ENST00000470171 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
FDPS-208ENST00000470171 RSPH4AQ5TD94 716 aa24.31■■□□□ 1.48
FDPS-208ENST00000470171 ZNF777Q9ULD5 760 aaPredicted RBP24.3■■□□□ 1.48
FDPS-208ENST00000470171 KDM5CP41229 1560 aa24.29■■□□□ 1.48
FDPS-208ENST00000470171 ABCC1P33527 1531 aa24.29■■□□□ 1.48
FDPS-208ENST00000470171 MYT1LQ9UL68 1186 aa24.28■■□□□ 1.48
FDPS-208ENST00000470171 C9orf84Q5VXU9 1444 aa24.27■■□□□ 1.48
FDPS-208ENST00000470171 YEATS2Q9ULM3 1422 aa24.27■■□□□ 1.48
FDPS-208ENST00000470171 TIAM1Q13009 1591 aa24.27■■□□□ 1.48
FDPS-208ENST00000470171 CDC42BPBQ9Y5S2 1711 aa24.26■■□□□ 1.47
FDPS-208ENST00000470171 LRRC9Q6ZRR7 1453 aa24.25■■□□□ 1.47
FDPS-208ENST00000470171 TRAPPC8Q9Y2L5 1435 aa24.24■■□□□ 1.47
FDPS-208ENST00000470171 ARHGEF12Q9NZN5 1544 aa24.22■■□□□ 1.47
FDPS-208ENST00000470171 NCOA2Q15596 1464 aa24.22■■□□□ 1.47
FDPS-208ENST00000470171 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
FDPS-208ENST00000470171 CDC42BPAQ5VT25 1732 aa24.21■■□□□ 1.47
FDPS-208ENST00000470171 HNRNPMP52272 730 aaKnown RBP eCLIP24.2■■□□□ 1.46
FDPS-208ENST00000470171 HECW2Q9P2P5 1572 aa24.19■■□□□ 1.46
FDPS-208ENST00000470171 REREQ9P2R6 1566 aa24.18■■□□□ 1.46
FDPS-208ENST00000470171 SUPT6HQ7KZ85 1726 aaKnown RBP24.18■■□□□ 1.46
FDPS-208ENST00000470171 SAMD9LQ8IVG5 1584 aa24.16■■□□□ 1.46
FDPS-208ENST00000470171 ADAMTSL3P82987 1691 aa24.16■■□□□ 1.46
FDPS-208ENST00000470171 ITSN2Q9NZM3 1697 aa24.16■■□□□ 1.46
FDPS-208ENST00000470171 PTPRMP28827 1452 aa24.14■■□□□ 1.46
FDPS-208ENST00000470171 RTEL1-TNFRSF6BF6WH68 1400 aa24.14■■□□□ 1.45
FDPS-208ENST00000470171 BCORL1Q5H9F3 1711 aa24.14■■□□□ 1.45
FDPS-208ENST00000470171 MIA2Q96PC5 1412 aa24.14■■□□□ 1.45
FDPS-208ENST00000470171 SYCP2Q9BX26 1530 aa24.14■■□□□ 1.45
FDPS-208ENST00000470171 KANK4Q5T7N3 995 aaPredicted RBP24.13■■□□□ 1.45
FDPS-208ENST00000470171 AGLP35573 1532 aa24.13■■□□□ 1.45
FDPS-208ENST00000470171 MBD5Q9P267 1494 aa24.12■■□□□ 1.45
FDPS-208ENST00000470171 TSPY4P0CV99 314 aa24.1■■□□□ 1.45
FDPS-208ENST00000470171 TSPY10P0CW01 314 aa24.1■■□□□ 1.45
FDPS-208ENST00000470171 ZNF644Q9H582 1327 aaPredicted RBP24.1■■□□□ 1.45
FDPS-208ENST00000470171 DIP2CQ9Y2E4 1556 aa24.09■■□□□ 1.45
FDPS-208ENST00000470171 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
FDPS-208ENST00000470171 ESF1Q9H501 851 aaKnown RBP24.08■■□□□ 1.45
FDPS-208ENST00000470171 MLECQ14165 292 aa24.07■■□□□ 1.44
FDPS-208ENST00000470171 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
FDPS-208ENST00000470171 CCDC141Q6ZP82 1450 aa24.05■■□□□ 1.44
FDPS-208ENST00000470171 ATP7AQ04656 1500 aa24.05■■□□□ 1.44
FDPS-208ENST00000470171 CAMSAP2Q08AD1 1489 aa24.04■■□□□ 1.44
FDPS-208ENST00000470171 CNTLNQ9NXG0 1405 aa24.02■■□□□ 1.44
FDPS-208ENST00000470171 A2MP01023 1474 aa24.01■■□□□ 1.43
FDPS-208ENST00000470171 KIDINS220Q9ULH0 1771 aa24.01■■□□□ 1.43
FDPS-208ENST00000470171 ABCA6Q8N139 1617 aa24.01■■□□□ 1.43
FDPS-208ENST00000470171 MADDQ8WXG6 1647 aa24.01■■□□□ 1.43
FDPS-208ENST00000470171 DHX29Q7Z478 1369 aaKnown RBP23.99■■□□□ 1.43
FDPS-208ENST00000470171 ARHGEF5Q12774 1597 aa23.99■■□□□ 1.43
FDPS-208ENST00000470171 INO80Q9ULG1 1556 aaPredicted RBP23.99■■□□□ 1.43
FDPS-208ENST00000470171 SIGLEC1Q9BZZ2 1709 aa23.91■■□□□ 1.42
FDPS-208ENST00000470171 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
FDPS-208ENST00000470171 RIMS1Q86UR5 1692 aaKnown RBP23.89■■□□□ 1.42
FDPS-208ENST00000470171 FGD6Q6ZV73 1430 aa23.88■■□□□ 1.41
FDPS-208ENST00000470171 ADGBQ8N7X0 1667 aa23.87■■□□□ 1.41
FDPS-208ENST00000470171 GGT6Q6P531 493 aa23.86■■□□□ 1.41
FDPS-208ENST00000470171 FER1L4A9Z1Z3 1794 aa23.86■■□□□ 1.41
FDPS-208ENST00000470171 TCOF1Q13428 1488 aaKnown RBP23.85■■□□□ 1.41
FDPS-208ENST00000470171 MAST1Q9Y2H9 1570 aa23.85■■□□□ 1.41
FDPS-208ENST00000470171 FAM135AQ9P2D6 1515 aa23.84■■□□□ 1.41
FDPS-208ENST00000470171 SHANK2Q9UPX8 1470 aa23.84■■□□□ 1.41
FDPS-208ENST00000470171 ZMYM3Q14202 1370 aa23.83■■□□□ 1.41
FDPS-208ENST00000470171 KIF3BO15066 747 aa23.83■■□□□ 1.41
FDPS-208ENST00000470171 NPATQ14207 1427 aa23.83■■□□□ 1.4
FDPS-208ENST00000470171 CEBPAP49715 358 aaPredicted RBP23.81■■□□□ 1.4
FDPS-208ENST00000470171 LMTK3Q96Q04 1460 aa23.81■■□□□ 1.4
FDPS-208ENST00000470171 PLPPR3Q6T4P5 718 aa23.8■■□□□ 1.4
FDPS-208ENST00000470171 ABCC5O15440 1437 aa23.79■■□□□ 1.4
FDPS-208ENST00000470171 UHRF1BP1Q6BDS2 1440 aa23.78■■□□□ 1.4
FDPS-208ENST00000470171 PTPN23Q9H3S7 1636 aa23.78■■□□□ 1.4
FDPS-208ENST00000470171 WASHC2CQ9Y4E1 1318 aa23.76■■□□□ 1.39
FDPS-208ENST00000470171 ANKRD30AQ9BXX3 1397 aa23.76■■□□□ 1.39
FDPS-208ENST00000470171 DAPK1P53355 1430 aa23.76■■□□□ 1.39
FDPS-208ENST00000470171 DUOX2Q9NRD8 1548 aa23.74■■□□□ 1.39
FDPS-208ENST00000470171 MROH2AA6NES4 1674 aa23.73■■□□□ 1.39
FDPS-208ENST00000470171 DMRT2Q9Y5R5 561 aa23.73■■□□□ 1.39
FDPS-208ENST00000470171 KIF15Q9NS87 1388 aa23.73■■□□□ 1.39
FDPS-208ENST00000470171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.72■■□□□ 1.393e-6■□□□□ 10.4
FDPS-208ENST00000470171 ERBINQ96RT1 1412 aa23.71■■□□□ 1.39
FDPS-208ENST00000470171 FAM50AQ14320 339 aaKnown RBP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms