RNA–Protein interactions for RNA: ENST00000469560.1

PMPCB-207, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,615 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-207ENST00000469560 ADCY10Q96PN6 1610 aa11.06□□□□□ -0.64
PMPCB-207ENST00000469560 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
PMPCB-207ENST00000469560 LRRC9Q6ZRR7 1453 aa11.05□□□□□ -0.64
PMPCB-207ENST00000469560 ABCC2Q92887 1545 aa11.03□□□□□ -0.64
PMPCB-207ENST00000469560 UHRF1BP1LA0JNW5 1464 aa11.03□□□□□ -0.64
PMPCB-207ENST00000469560 KDM5BQ9UGL1 1544 aa11□□□□□ -0.65
PMPCB-207ENST00000469560 ZCCHC11Q5TAX3 1644 aaKnown RBP10.99□□□□□ -0.65
PMPCB-207ENST00000469560 CCDC18Q5T9S5 1454 aa10.99□□□□□ -0.65
PMPCB-207ENST00000469560 PHLDB1Q86UU1 1377 aa10.99□□□□□ -0.65
PMPCB-207ENST00000469560 CYB5RLQ6IPT4 315 aa10.97□□□□□ -0.65
PMPCB-207ENST00000469560 KIF14Q15058 1648 aa10.96□□□□□ -0.65
PMPCB-207ENST00000469560 NCOA2Q15596 1464 aa10.95□□□□□ -0.66
PMPCB-207ENST00000469560 EHBP1L1Q8N3D4 1523 aa10.94□□□□□ -0.66
PMPCB-207ENST00000469560 TROQ12816 1431 aaPredicted RBP10.94□□□□□ -0.66
PMPCB-207ENST00000469560 POLA2Q14181 598 aa10.94□□□□□ -0.66
PMPCB-207ENST00000469560 FKBP8Q14318 412 aa10.94□□□□□ -0.66
PMPCB-207ENST00000469560 MTUS2Q5JR59 1369 aa10.94□□□□□ -0.66
PMPCB-207ENST00000469560 ABCC10Q5T3U5 1492 aa10.93□□□□□ -0.66
PMPCB-207ENST00000469560 DNAJC5Q9H3Z4 198 aa10.91□□□□□ -0.66
PMPCB-207ENST00000469560 SUPT6HQ7KZ85 1726 aaKnown RBP10.9□□□□□ -0.67
PMPCB-207ENST00000469560 ASXL2Q76L83 1435 aa10.9□□□□□ -0.67
PMPCB-207ENST00000469560 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.67
PMPCB-207ENST00000469560 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
PMPCB-207ENST00000469560 PCGF6Q9BYE7 350 aa10.89□□□□□ -0.67
PMPCB-207ENST00000469560 TTC37Q6PGP7 1564 aa10.89□□□□□ -0.67
PMPCB-207ENST00000469560 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.88□□□□□ -0.67
PMPCB-207ENST00000469560 PLEKHD1A6NEE1 506 aa10.88□□□□□ -0.67
PMPCB-207ENST00000469560 GPATCH8Q9UKJ3 1502 aaKnown RBP10.88□□□□□ -0.67
PMPCB-207ENST00000469560 MYOM3Q5VTT5 1437 aa10.87□□□□□ -0.67
PMPCB-207ENST00000469560 WDR7Q9Y4E6 1490 aa10.87□□□□□ -0.67
PMPCB-207ENST00000469560 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
PMPCB-207ENST00000469560 CDC42BPAQ5VT25 1732 aa10.86□□□□□ -0.67
PMPCB-207ENST00000469560 FGD6Q6ZV73 1430 aa10.86□□□□□ -0.67
PMPCB-207ENST00000469560 LHX8Q68G74 356 aa10.85□□□□□ -0.67
PMPCB-207ENST00000469560 KCNH8Q96L42 1107 aa10.85□□□□□ -0.67
PMPCB-207ENST00000469560 PTPRKQ15262 1439 aa10.85□□□□□ -0.67
PMPCB-207ENST00000469560 CDK11AQ9UQ88 783 aaPredicted RBP10.84□□□□□ -0.67
PMPCB-207ENST00000469560 CCNB3Q8WWL7 1395 aa10.84□□□□□ -0.67
PMPCB-207ENST00000469560 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
PMPCB-207ENST00000469560 MAPKBP1O60336 1514 aa10.84□□□□□ -0.67
PMPCB-207ENST00000469560 TCOF1Q13428 1488 aaKnown RBP10.82□□□□□ -0.68
PMPCB-207ENST00000469560 PTPN23Q9H3S7 1636 aa10.82□□□□□ -0.68
PMPCB-207ENST00000469560 ABCA9Q8IUA7 1624 aa10.81□□□□□ -0.68
PMPCB-207ENST00000469560 PREX2Q70Z35 1606 aa10.8□□□□□ -0.68
PMPCB-207ENST00000469560 RBM42Q9BTD8 480 aaKnown RBP10.8□□□□□ -0.68
PMPCB-207ENST00000469560 SAMD9LQ8IVG5 1584 aa10.79□□□□□ -0.68
PMPCB-207ENST00000469560 ARHGEF12Q9NZN5 1544 aa10.79□□□□□ -0.68
PMPCB-207ENST00000469560 MIA2Q96PC5 1412 aa10.79□□□□□ -0.68
PMPCB-207ENST00000469560 PLCH2O75038 1416 aa10.78□□□□□ -0.68
PMPCB-207ENST00000469560 NPM1P06748 294 aaKnown RBP eCLIP10.78□□□□□ -0.68
PMPCB-207ENST00000469560 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.78□□□□□ -0.68
PMPCB-207ENST00000469560 DIP2BQ9P265 1576 aa10.77□□□□□ -0.68
PMPCB-207ENST00000469560 CAMSAP2Q08AD1 1489 aa10.77□□□□□ -0.69
PMPCB-207ENST00000469560 ATXN8OSP0DMR3 200 aa10.76□□□□□ -0.69
PMPCB-207ENST00000469560 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
PMPCB-207ENST00000469560 CFDP1Q9UEE9 299 aaPredicted RBP10.76□□□□□ -0.69
PMPCB-207ENST00000469560 MYO5CQ9NQX4 1742 aa10.76□□□□□ -0.69
PMPCB-207ENST00000469560 MBD5Q9P267 1494 aa10.76□□□□□ -0.69
PMPCB-207ENST00000469560 ITSN2Q9NZM3 1697 aa10.76□□□□□ -0.69
PMPCB-207ENST00000469560 ABCC5O15440 1437 aa10.76□□□□□ -0.69
PMPCB-207ENST00000469560 KIF13AQ9H1H9 1805 aa10.75□□□□□ -0.69
PMPCB-207ENST00000469560 MAP3K4Q9Y6R4 1608 aa10.75□□□□□ -0.69
PMPCB-207ENST00000469560 GLI2P10070 1586 aa10.75□□□□□ -0.69
PMPCB-207ENST00000469560 PPRC1Q5VV67 1664 aaKnown RBP10.74□□□□□ -0.69
PMPCB-207ENST00000469560 ITGAEP38570 1179 aa10.74□□□□□ -0.69
PMPCB-207ENST00000469560 ZNF777Q9ULD5 760 aaPredicted RBP10.74□□□□□ -0.69
PMPCB-207ENST00000469560 HNRNPMP52272 730 aaKnown RBP eCLIP10.73□□□□□ -0.69
PMPCB-207ENST00000469560 ARHGAP5Q13017 1502 aa10.73□□□□□ -0.69
PMPCB-207ENST00000469560 ARAP3Q8WWN8 1544 aa10.73□□□□□ -0.69
PMPCB-207ENST00000469560 DNMT1P26358 1616 aaKnown RBP10.72□□□□□ -0.69
PMPCB-207ENST00000469560 DAPK1P53355 1430 aa10.72□□□□□ -0.69
PMPCB-207ENST00000469560 CD109Q6YHK3 1445 aa10.72□□□□□ -0.69
PMPCB-207ENST00000469560 HAX1O00165 279 aa10.72□□□□□ -0.69
PMPCB-207ENST00000469560 TRAPPC8Q9Y2L5 1435 aa10.71□□□□□ -0.69
PMPCB-207ENST00000469560 ABCC1P33527 1531 aa10.71□□□□□ -0.69
PMPCB-207ENST00000469560 SYCP2Q9BX26 1530 aa10.71□□□□□ -0.69
PMPCB-207ENST00000469560 FAM69CQ0P6D2 419 aa10.71□□□□□ -0.69
PMPCB-207ENST00000469560 KDM6BO15054 1643 aa10.71□□□□□ -0.7
PMPCB-207ENST00000469560 FANCAO15360 1455 aa10.7□□□□□ -0.7
PMPCB-207ENST00000469560 CROCC2H7BZ55 1655 aa10.69□□□□□ -0.7
PMPCB-207ENST00000469560 ARHGEF5Q12774 1597 aa10.69□□□□□ -0.7
PMPCB-207ENST00000469560 CHIC2Q9UKJ5 165 aa10.69□□□□□ -0.7
PMPCB-207ENST00000469560 AKNAQ7Z591 1439 aa10.68□□□□□ -0.7
PMPCB-207ENST00000469560 EFCAB2Q5VUJ9 269 aa10.68□□□□□ -0.7
PMPCB-207ENST00000469560 KIAA1107Q9UPP5 1409 aa10.68□□□□□ -0.7
PMPCB-207ENST00000469560 NAIPQ13075 1403 aa10.67□□□□□ -0.7
PMPCB-207ENST00000469560 AFAP1Q8N556 730 aa10.67□□□□□ -0.7
PMPCB-207ENST00000469560 COL17A1Q9UMD9 1497 aaPredicted RBP10.67□□□□□ -0.7
PMPCB-207ENST00000469560 TSPOAP1O95153 1857 aa10.66□□□□□ -0.7
PMPCB-207ENST00000469560 RRP7BPQ9NSQ0 103 aa10.66□□□□□ -0.7
PMPCB-207ENST00000469560 NCOA1Q15788 1441 aa10.65□□□□□ -0.7
PMPCB-207ENST00000469560 SCAPERQ9BY12 1400 aa10.65□□□□□ -0.7
PMPCB-207ENST00000469560 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.71
PMPCB-207ENST00000469560 HFM1A2PYH4 1435 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 ADGRL1O94910 1474 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 ADGRL2O95490 1459 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 CCDC141Q6ZP82 1450 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 RAB3GAP2Q9H2M9 1393 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 C9orf84Q5VXU9 1444 aa10.64□□□□□ -0.71
PMPCB-207ENST00000469560 MAST1Q9Y2H9 1570 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms