RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 PIAS4Q8N2W9 510 aaPredicted RBP8.6□□□□□ -1.03
PRKD3-207ENST00000469275 CFDP1Q9UEE9 299 aaPredicted RBP8.6□□□□□ -1.03
PRKD3-207ENST00000469275 KDM6BO15054 1643 aa8.59□□□□□ -1.03
PRKD3-207ENST00000469275 SHROOM2Q13796 1616 aa8.59□□□□□ -1.03
PRKD3-207ENST00000469275 CARMIL2Q6F5E8 1435 aa8.59□□□□□ -1.03
PRKD3-207ENST00000469275 UACAQ9BZF9 1416 aa8.58□□□□□ -1.04
PRKD3-207ENST00000469275 PPP1R15AO75807 674 aaPredicted RBP8.58□□□□□ -1.04
PRKD3-207ENST00000469275 KCNH8Q96L42 1107 aa8.57□□□□□ -1.04
PRKD3-207ENST00000469275 CLASP1Q7Z460 1538 aa8.57□□□□□ -1.04
PRKD3-207ENST00000469275 PLEKHD1A6NEE1 506 aa8.56□□□□□ -1.04
PRKD3-207ENST00000469275 KIF14Q15058 1648 aa8.56□□□□□ -1.04
PRKD3-207ENST00000469275 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
PRKD3-207ENST00000469275 TCOF1Q13428 1488 aaKnown RBP8.55□□□□□ -1.04
PRKD3-207ENST00000469275 DAPK1P53355 1430 aa8.55□□□□□ -1.04
PRKD3-207ENST00000469275 TROQ12816 1431 aaPredicted RBP8.55□□□□□ -1.04
PRKD3-207ENST00000469275 MIA2Q96PC5 1412 aa8.55□□□□□ -1.04
PRKD3-207ENST00000469275 ABCC5O15440 1437 aa8.54□□□□□ -1.04
PRKD3-207ENST00000469275 SLC4A1APQ9BWU0 796 aaKnown RBP8.53□□□□□ -1.04
PRKD3-207ENST00000469275 PTPRGP23470 1445 aa8.53□□□□□ -1.04
PRKD3-207ENST00000469275 DENND4BO75064 1496 aaPredicted RBP8.53□□□□□ -1.04
PRKD3-207ENST00000469275 HNRNPMP52272 730 aaKnown RBP eCLIP8.52□□□□□ -1.04
PRKD3-207ENST00000469275 ATP10BO94823 1461 aa8.52□□□□□ -1.05
PRKD3-207ENST00000469275 GPATCH8Q9UKJ3 1502 aaKnown RBP8.52□□□□□ -1.05
PRKD3-207ENST00000469275 PPP4R3CPQ6ZMV5 832 aa8.52□□□□□ -1.05
PRKD3-207ENST00000469275 CAMSAP2Q08AD1 1489 aa8.52□□□□□ -1.05
PRKD3-207ENST00000469275 ERCC6L2Q5T890 1561 aa8.51□□□□□ -1.05
PRKD3-207ENST00000469275 ZNF326Q5BKZ1 582 aaKnown RBP8.5□□□□□ -1.05
PRKD3-207ENST00000469275 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
PRKD3-207ENST00000469275 GCC2Q8IWJ2 1684 aa8.5□□□□□ -1.05
PRKD3-207ENST00000469275 DNMT1P26358 1616 aaKnown RBP8.49□□□□□ -1.05
PRKD3-207ENST00000469275 TIMELESSQ9UNS1 1208 aa8.49□□□□□ -1.05
PRKD3-207ENST00000469275 ABCA8O94911 1581 aa8.49□□□□□ -1.05
PRKD3-207ENST00000469275 CNGB1Q14028 1251 aaPredicted RBP8.47□□□□□ -1.05
PRKD3-207ENST00000469275 AKNAQ7Z591 1439 aa8.47□□□□□ -1.05
PRKD3-207ENST00000469275 TSPY4P0CV99 314 aa8.47□□□□□ -1.05
PRKD3-207ENST00000469275 TSPY10P0CW01 314 aa8.47□□□□□ -1.05
PRKD3-207ENST00000469275 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
PRKD3-207ENST00000469275 HSPA5P11021 654 aaKnown RBP8.46□□□□□ -1.05
PRKD3-207ENST00000469275 PKD2Q13563 968 aa8.46□□□□□ -1.05
PRKD3-207ENST00000469275 ROCK1Q13464 1354 aa8.45□□□□□ -1.06
PRKD3-207ENST00000469275 NBPF8Q3BBV2 869 aa8.45□□□□□ -1.06
PRKD3-207ENST00000469275 CDC42BPAQ5VT25 1732 aa8.45□□□□□ -1.06
PRKD3-207ENST00000469275 KDM5BQ9UGL1 1544 aa8.45□□□□□ -1.06
PRKD3-207ENST00000469275 ITSN2Q9NZM3 1697 aa8.45□□□□□ -1.06
PRKD3-207ENST00000469275 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.45□□□□□ -1.064e-6■□□□□ 8.4
PRKD3-207ENST00000469275 ANKRD30AQ9BXX3 1397 aa8.44□□□□□ -1.06
PRKD3-207ENST00000469275 ABCC10Q5T3U5 1492 aa8.44□□□□□ -1.06
PRKD3-207ENST00000469275 POLR3GLQ9BT43 218 aa8.44□□□□□ -1.06
PRKD3-207ENST00000469275 ANKRD30BQ9BXX2 1392 aa8.44□□□□□ -1.06
PRKD3-207ENST00000469275 ANKRD50Q9ULJ7 1429 aa8.44□□□□□ -1.06
PRKD3-207ENST00000469275 NUP155O75694 1391 aa8.43□□□□□ -1.06
PRKD3-207ENST00000469275 C9orf84Q5VXU9 1444 aa8.43□□□□□ -1.06
PRKD3-207ENST00000469275 ANP32CO43423 234 aa8.43□□□□□ -1.06
PRKD3-207ENST00000469275 ADCY10Q96PN6 1610 aa8.43□□□□□ -1.06
PRKD3-207ENST00000469275 KDM2AQ9Y2K7 1162 aa8.42□□□□□ -1.06
PRKD3-207ENST00000469275 UHRF1BP1LA0JNW5 1464 aa8.42□□□□□ -1.06
PRKD3-207ENST00000469275 PZPP20742 1482 aa8.42□□□□□ -1.06
PRKD3-207ENST00000469275 C11orf95C9JLR9 678 aaPredicted RBP8.42□□□□□ -1.06
PRKD3-207ENST00000469275 EIF4G2P78344 907 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRKD3-207ENST00000469275 KIF15Q9NS87 1388 aa8.41□□□□□ -1.06
PRKD3-207ENST00000469275 WASHC2AQ641Q2 1341 aa8.41□□□□□ -1.06
PRKD3-207ENST00000469275 OSCARQ8IYS5 282 aa8.41□□□□□ -1.06
PRKD3-207ENST00000469275 ARHGAP5Q13017 1502 aa8.4□□□□□ -1.06
PRKD3-207ENST00000469275 TTC37Q6PGP7 1564 aa8.4□□□□□ -1.06
PRKD3-207ENST00000469275 RPRD2Q5VT52 1461 aaKnown RBP8.4□□□□□ -1.07
PRKD3-207ENST00000469275 ADGBQ8N7X0 1667 aa8.39□□□□□ -1.07
PRKD3-207ENST00000469275 SAMD9LQ8IVG5 1584 aa8.39□□□□□ -1.07
PRKD3-207ENST00000469275 CDC42BPBQ9Y5S2 1711 aa8.39□□□□□ -1.07
PRKD3-207ENST00000469275 SYCP2Q9BX26 1530 aa8.39□□□□□ -1.07
PRKD3-207ENST00000469275 CROCC2H7BZ55 1655 aa8.39□□□□□ -1.07
PRKD3-207ENST00000469275 RGL3Q3MIN7 710 aa8.38□□□□□ -1.07
PRKD3-207ENST00000469275 MYT1LQ9UL68 1186 aa8.38□□□□□ -1.07
PRKD3-207ENST00000469275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRKD3-207ENST00000469275 MBD5Q9P267 1494 aa8.38□□□□□ -1.07
PRKD3-207ENST00000469275 ADGRL2O95490 1459 aa8.37□□□□□ -1.07
PRKD3-207ENST00000469275 TEX14Q8IWB6 1497 aa8.37□□□□□ -1.07
PRKD3-207ENST00000469275 KIAA1107Q9UPP5 1409 aa8.37□□□□□ -1.07
PRKD3-207ENST00000469275 ABCC2Q92887 1545 aa8.37□□□□□ -1.07
PRKD3-207ENST00000469275 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
PRKD3-207ENST00000469275 CCDC141Q6ZP82 1450 aa8.36□□□□□ -1.07
PRKD3-207ENST00000469275 AFAP1Q8N556 730 aa8.36□□□□□ -1.07
PRKD3-207ENST00000469275 PREX2Q70Z35 1606 aa8.35□□□□□ -1.07
PRKD3-207ENST00000469275 SENP3-EIF4A1A0A087X0R7 540 aa8.35□□□□□ -1.07
PRKD3-207ENST00000469275 CCDC184Q52MB2 194 aa8.34□□□□□ -1.07
PRKD3-207ENST00000469275 BCANQ96GW7 911 aa8.34□□□□□ -1.07
PRKD3-207ENST00000469275 ZCCHC11Q5TAX3 1644 aaKnown RBP8.34□□□□□ -1.07
PRKD3-207ENST00000469275 ARHGEF12Q9NZN5 1544 aa8.34□□□□□ -1.07
PRKD3-207ENST00000469275 NPM3O75607 178 aaKnown RBP8.33□□□□□ -1.08
PRKD3-207ENST00000469275 PLEKHH2Q8IVE3 1493 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 KIF7Q2M1P5 1343 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 RIMBP3CA6NJZ7 1639 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 RIMBP3BA6NNM3 1639 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 RIMBP3Q9UFD9 1639 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 SHANK2Q9UPX8 1470 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 EFCAB2Q5VUJ9 269 aa8.33□□□□□ -1.08
PRKD3-207ENST00000469275 CARD11Q9BXL7 1154 aa8.32□□□□□ -1.08
PRKD3-207ENST00000469275 CCDC7Q96M83 1385 aa8.32□□□□□ -1.08
PRKD3-207ENST00000469275 TRAPPC8Q9Y2L5 1435 aa8.32□□□□□ -1.08
PRKD3-207ENST00000469275 MYO5CQ9NQX4 1742 aa8.31□□□□□ -1.08
PRKD3-207ENST00000469275 HNRNPUQ00839 825 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms