RNA–Protein interactions for RNA: ENST00000468999.1

LAMB1-207, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-207ENST00000468999 ZFYVE16Q7Z3T8 1539 aa18.44■□□□□ 0.54
LAMB1-207ENST00000468999 CLIP1P30622 1438 aa18.44■□□□□ 0.54
LAMB1-207ENST00000468999 MADDQ8WXG6 1647 aa18.44■□□□□ 0.54
LAMB1-207ENST00000468999 YEATS2Q9ULM3 1422 aa18.42■□□□□ 0.54
LAMB1-207ENST00000468999 ZMYM4Q5VZL5 1548 aa18.42■□□□□ 0.54
LAMB1-207ENST00000468999 TROQ12816 1431 aaPredicted RBP18.4■□□□□ 0.54
LAMB1-207ENST00000468999 KIF14Q15058 1648 aa18.39■□□□□ 0.53
LAMB1-207ENST00000468999 RIMS1Q86UR5 1692 aaKnown RBP18.39■□□□□ 0.53
LAMB1-207ENST00000468999 MYO5CQ9NQX4 1742 aa18.39■□□□□ 0.53
LAMB1-207ENST00000468999 ARHGAP5Q13017 1502 aa18.38■□□□□ 0.53
LAMB1-207ENST00000468999 ATP10AO60312 1499 aa18.37■□□□□ 0.53
LAMB1-207ENST00000468999 AFAP1Q8N556 730 aa18.36■□□□□ 0.53
LAMB1-207ENST00000468999 PCF11O94913 1555 aaKnown RBP18.34■□□□□ 0.53
LAMB1-207ENST00000468999 ZNF518AQ6AHZ1 1483 aa18.33■□□□□ 0.53
LAMB1-207ENST00000468999 CASKIN1Q8WXD9 1431 aa18.33■□□□□ 0.53
LAMB1-207ENST00000468999 CCDC18Q5T9S5 1454 aa18.33■□□□□ 0.52
LAMB1-207ENST00000468999 C9orf84Q5VXU9 1444 aa18.32■□□□□ 0.52
LAMB1-207ENST00000468999 HSPA2P54652 639 aa18.32■□□□□ 0.52
LAMB1-207ENST00000468999 LMTK3Q96Q04 1460 aa18.32■□□□□ 0.52
LAMB1-207ENST00000468999 FBXO41Q8TF61 875 aa18.31■□□□□ 0.52
LAMB1-207ENST00000468999 ESF1Q9H501 851 aaKnown RBP18.29■□□□□ 0.52
LAMB1-207ENST00000468999 ZNF777Q9ULD5 760 aaPredicted RBP18.28■□□□□ 0.52
LAMB1-207ENST00000468999 LRRIQ1Q96JM4 1722 aa18.28■□□□□ 0.52
LAMB1-207ENST00000468999 SIGLEC1Q9BZZ2 1709 aa18.27■□□□□ 0.52
LAMB1-207ENST00000468999 FER1L4A9Z1Z3 1794 aa18.27■□□□□ 0.51
LAMB1-207ENST00000468999 CEBPAP49715 358 aaPredicted RBP18.26■□□□□ 0.51
LAMB1-207ENST00000468999 FYCO1Q9BQS8 1478 aa18.24■□□□□ 0.51
LAMB1-207ENST00000468999 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
LAMB1-207ENST00000468999 CDC42BPBQ9Y5S2 1711 aa18.23■□□□□ 0.51
LAMB1-207ENST00000468999 KDM5CP41229 1560 aa18.22■□□□□ 0.51
LAMB1-207ENST00000468999 MLH3Q9UHC1 1453 aa18.21■□□□□ 0.51
LAMB1-207ENST00000468999 PREX2Q70Z35 1606 aa18.21■□□□□ 0.51
LAMB1-207ENST00000468999 TRAPPC8Q9Y2L5 1435 aa18.21■□□□□ 0.51
LAMB1-207ENST00000468999 DIP2CQ9Y2E4 1556 aa18.18■□□□□ 0.5
LAMB1-207ENST00000468999 HNRNPMP52272 730 aaKnown RBP eCLIP18.18■□□□□ 0.5
LAMB1-207ENST00000468999 CFDP1Q9UEE9 299 aaPredicted RBP18.18■□□□□ 0.5
LAMB1-207ENST00000468999 ABCC1P33527 1531 aa18.18■□□□□ 0.5
LAMB1-207ENST00000468999 DMRT2Q9Y5R5 561 aa18.16■□□□□ 0.5
LAMB1-207ENST00000468999 SPAG9O60271 1321 aaKnown RBP18.16■□□□□ 0.5
LAMB1-207ENST00000468999 MTUS2Q5JR59 1369 aa18.16■□□□□ 0.5
LAMB1-207ENST00000468999 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
LAMB1-207ENST00000468999 ABCA6Q8N139 1617 aa18.15■□□□□ 0.5
LAMB1-207ENST00000468999 ITSN2Q9NZM3 1697 aa18.15■□□□□ 0.5
LAMB1-207ENST00000468999 UHRF1BP1Q6BDS2 1440 aa18.15■□□□□ 0.5
LAMB1-207ENST00000468999 REREQ9P2R6 1566 aa18.14■□□□□ 0.49
LAMB1-207ENST00000468999 CDC42BPAQ5VT25 1732 aa18.14■□□□□ 0.49
LAMB1-207ENST00000468999 GPATCH8Q9UKJ3 1502 aaKnown RBP18.13■□□□□ 0.49
LAMB1-207ENST00000468999 PREX1Q8TCU6 1659 aa18.13■□□□□ 0.49
LAMB1-207ENST00000468999 CERKQ8TCT0 537 aa18.13■□□□□ 0.49
LAMB1-207ENST00000468999 AGLP35573 1532 aa18.12■□□□□ 0.49
LAMB1-207ENST00000468999 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
LAMB1-207ENST00000468999 KIDINS220Q9ULH0 1771 aa18.09■□□□□ 0.49
LAMB1-207ENST00000468999 SAMD9LQ8IVG5 1584 aa18.08■□□□□ 0.49
LAMB1-207ENST00000468999 SYCP2Q9BX26 1530 aa18.08■□□□□ 0.49
LAMB1-207ENST00000468999 CNTLNQ9NXG0 1405 aa18.08■□□□□ 0.49
LAMB1-207ENST00000468999 KIAA1107Q9UPP5 1409 aa18.07■□□□□ 0.48
LAMB1-207ENST00000468999 SETD1BQ9UPS6 1966 aaKnown RBP18.06■□□□□ 0.48
LAMB1-207ENST00000468999 GGT6Q6P531 493 aa18.05■□□□□ 0.48
LAMB1-207ENST00000468999 C3P01024 1663 aa18.05■□□□□ 0.48
LAMB1-207ENST00000468999 ZMYM3Q14202 1370 aa18.03■□□□□ 0.48
LAMB1-207ENST00000468999 ZNF644Q9H582 1327 aaPredicted RBP18.02■□□□□ 0.48
LAMB1-207ENST00000468999 CEP162Q5TB80 1403 aa18.02■□□□□ 0.48
LAMB1-207ENST00000468999 ATP7AQ04656 1500 aa18.02■□□□□ 0.47
LAMB1-207ENST00000468999 A2MP01023 1474 aa18.01■□□□□ 0.47
LAMB1-207ENST00000468999 SUPT6HQ7KZ85 1726 aaKnown RBP18.01■□□□□ 0.47
LAMB1-207ENST00000468999 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
LAMB1-207ENST00000468999 NPATQ14207 1427 aa17.98■□□□□ 0.47
LAMB1-207ENST00000468999 STRCQ7RTU9 1775 aa17.97■□□□□ 0.47
LAMB1-207ENST00000468999 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
LAMB1-207ENST00000468999 PTPRTO14522 1441 aa17.97■□□□□ 0.47
LAMB1-207ENST00000468999 TIAM1Q13009 1591 aa17.96■□□□□ 0.46
LAMB1-207ENST00000468999 INO80Q9ULG1 1556 aaPredicted RBP17.96■□□□□ 0.46
LAMB1-207ENST00000468999 RSPH4AQ5TD94 716 aa17.95■□□□□ 0.46
LAMB1-207ENST00000468999 MROH2AA6NES4 1674 aa17.94■□□□□ 0.46
LAMB1-207ENST00000468999 CLTCQ00610 1675 aaKnown RBP17.93■□□□□ 0.46
LAMB1-207ENST00000468999 RTEL1-TNFRSF6BF6WH68 1400 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 LOC105371045A0A1W2PR82 267 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 KIF3BO15066 747 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 TSPY4P0CV99 314 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 TSPY10P0CW01 314 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 MBD5Q9P267 1494 aa17.92■□□□□ 0.46
LAMB1-207ENST00000468999 PLXNC1O60486 1568 aa17.91■□□□□ 0.46
LAMB1-207ENST00000468999 ADGBQ8N7X0 1667 aa17.91■□□□□ 0.46
LAMB1-207ENST00000468999 NCOA2Q15596 1464 aa17.91■□□□□ 0.46
LAMB1-207ENST00000468999 NCKAP5LQ9HCH0 1330 aa17.91■□□□□ 0.46
LAMB1-207ENST00000468999 DHX29Q7Z478 1369 aaKnown RBP17.91■□□□□ 0.46
LAMB1-207ENST00000468999 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
LAMB1-207ENST00000468999 CAMSAP1Q5T5Y3 1602 aa17.89■□□□□ 0.45
LAMB1-207ENST00000468999 PTPRKQ15262 1439 aa17.88■□□□□ 0.45
LAMB1-207ENST00000468999 CCDC141Q6ZP82 1450 aa17.88■□□□□ 0.45
LAMB1-207ENST00000468999 PKD2Q13563 968 aa17.87■□□□□ 0.45
LAMB1-207ENST00000468999 WASHC2CQ9Y4E1 1318 aa17.87■□□□□ 0.45
LAMB1-207ENST00000468999 CAMSAP2Q08AD1 1489 aa17.86■□□□□ 0.45
LAMB1-207ENST00000468999 VPS8Q8N3P4 1428 aa17.83■□□□□ 0.45
LAMB1-207ENST00000468999 FBXO31Q5XUX0 539 aaPredicted RBP17.82■□□□□ 0.44
LAMB1-207ENST00000468999 MYO3AQ8NEV4 1616 aa17.82■□□□□ 0.44
LAMB1-207ENST00000468999 CEP170BQ9Y4F5 1589 aaPredicted RBP17.82■□□□□ 0.44
LAMB1-207ENST00000468999 APLP2Q06481 763 aa17.81■□□□□ 0.44
LAMB1-207ENST00000468999 LRRC9Q6ZRR7 1453 aa17.81■□□□□ 0.44
LAMB1-207ENST00000468999 PLA2R1Q13018 1463 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms