RNA–Protein interactions for RNA: ENST00000468999.1

LAMB1-207, Transcript of laminin subunit beta 1, humanhuman

TSL 2

Gene LAMB1, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB1-207ENST00000468999 NISCHQ9Y2I1 1504 aa28.04■■■□□ 2.08
LAMB1-207ENST00000468999 ABCC9O60706 1549 aa25.23■■□□□ 1.63
LAMB1-207ENST00000468999 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
LAMB1-207ENST00000468999 RB1CC1Q8TDY2 1594 aa23.99■■□□□ 1.43
LAMB1-207ENST00000468999 DCAF8L2P0C7V8 631 aa23.93■■□□□ 1.42
LAMB1-207ENST00000468999 NACADO15069 1562 aa23.81■■□□□ 1.4
LAMB1-207ENST00000468999 DNAJC5BQ9UF47 199 aa23.67■■□□□ 1.38
LAMB1-207ENST00000468999 PABPN1Q86U42 306 aaKnown RBP eCLIP23.56■■□□□ 1.36
LAMB1-207ENST00000468999 MYO15BQ96JP2 1530 aa23.43■■□□□ 1.34
LAMB1-207ENST00000468999 UNC13AQ9UPW8 1703 aa23.33■■□□□ 1.32
LAMB1-207ENST00000468999 BICRAQ9NZM4 1560 aa23.2■■□□□ 1.3
LAMB1-207ENST00000468999 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
LAMB1-207ENST00000468999 DCAF1Q9Y4B6 1507 aa23.13■■□□□ 1.29
LAMB1-207ENST00000468999 SCRIBQ14160 1630 aa22.94■■□□□ 1.26
LAMB1-207ENST00000468999 SHROOM4Q9ULL8 1493 aa22.92■■□□□ 1.26
LAMB1-207ENST00000468999 CC2D2AQ9P2K1 1620 aa22.75■■□□□ 1.23
LAMB1-207ENST00000468999 CECR2Q9BXF3 1484 aa22.73■■□□□ 1.23
LAMB1-207ENST00000468999 EIF4G1Q04637 1599 aaKnown RBP22.68■■□□□ 1.22
LAMB1-207ENST00000468999 NCAPD3P42695 1498 aa21.98■■□□□ 1.11
LAMB1-207ENST00000468999 ATAD2BQ9ULI0 1458 aa21.91■■□□□ 1.1
LAMB1-207ENST00000468999 SMARCA2P51531 1590 aa21.87■■□□□ 1.09
LAMB1-207ENST00000468999 SMARCA4P51532 1647 aa21.86■■□□□ 1.09
LAMB1-207ENST00000468999 ERCC6Q03468 1493 aa21.83■■□□□ 1.09
LAMB1-207ENST00000468999 DNAJC5Q9H3Z4 198 aa21.79■■□□□ 1.08
LAMB1-207ENST00000468999 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
LAMB1-207ENST00000468999 HMGXB3Q12766 1538 aa21.77■■□□□ 1.08
LAMB1-207ENST00000468999 BAZ1BQ9UIG0 1483 aaKnown RBP21.74■■□□□ 1.07
LAMB1-207ENST00000468999 CUX2O14529 1486 aa21.72■■□□□ 1.07
LAMB1-207ENST00000468999 NESP48681 1621 aa21.64■■□□□ 1.05
LAMB1-207ENST00000468999 PEG3Q9GZU2 1588 aa21.61■■□□□ 1.05
LAMB1-207ENST00000468999 MROH2BQ7Z745 1585 aa21.6■■□□□ 1.05
LAMB1-207ENST00000468999 LAMC3Q9Y6N6 1575 aa21.48■■□□□ 1.03
LAMB1-207ENST00000468999 PDS5BQ9NTI5 1447 aa21.43■■□□□ 1.02
LAMB1-207ENST00000468999 CADPSQ9ULU8 1353 aa21.36■■□□□ 1.01
LAMB1-207ENST00000468999 THOC2Q8NI27 1593 aaKnown RBP21.35■■□□□ 1.01
LAMB1-207ENST00000468999 WIZO95785 1651 aa21.34■■□□□ 1.01
LAMB1-207ENST00000468999 KIF21AQ7Z4S6 1674 aa21.31■■□□□ 1
LAMB1-207ENST00000468999 MRC2Q9UBG0 1479 aa21.2■□□□□ 0.98
LAMB1-207ENST00000468999 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
LAMB1-207ENST00000468999 CEP164Q9UPV0 1460 aa21.13■□□□□ 0.97
LAMB1-207ENST00000468999 FANCD2Q9BXW9 1451 aa21.1■□□□□ 0.97
LAMB1-207ENST00000468999 WDR62O43379 1518 aa21.09■□□□□ 0.97
LAMB1-207ENST00000468999 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
LAMB1-207ENST00000468999 CFTRP13569 1480 aa21.07■□□□□ 0.96
LAMB1-207ENST00000468999 TRIM41Q8WV44 630 aa20.92■□□□□ 0.94
LAMB1-207ENST00000468999 URB2Q14146 1524 aaKnown RBP20.88■□□□□ 0.93
LAMB1-207ENST00000468999 CCDC88BA6NC98 1476 aa20.88■□□□□ 0.93
LAMB1-207ENST00000468999 OSCARQ8IYS5 282 aa20.86■□□□□ 0.93
LAMB1-207ENST00000468999 PRDM2Q13029 1718 aa20.78■□□□□ 0.92
LAMB1-207ENST00000468999 IFT140Q96RY7 1462 aa20.7■□□□□ 0.9
LAMB1-207ENST00000468999 ABCC8Q09428 1581 aa20.68■□□□□ 0.9
LAMB1-207ENST00000468999 TOPBP1Q92547 1522 aa20.67■□□□□ 0.9
LAMB1-207ENST00000468999 ZNF608Q9ULD9 1512 aaPredicted RBP20.63■□□□□ 0.89
LAMB1-207ENST00000468999 DNMBPQ6XZF7 1577 aa20.59■□□□□ 0.89
LAMB1-207ENST00000468999 FBLN2P98095 1184 aa20.51■□□□□ 0.87
LAMB1-207ENST00000468999 AQRO60306 1485 aaKnown RBP eCLIP20.5■□□□□ 0.87
LAMB1-207ENST00000468999 EIF4G3O43432 1585 aaKnown RBP20.5■□□□□ 0.87
LAMB1-207ENST00000468999 POLA1P09884 1462 aaPredicted RBP20.45■□□□□ 0.86
LAMB1-207ENST00000468999 TARBP1Q13395 1621 aaKnown RBP20.45■□□□□ 0.86
LAMB1-207ENST00000468999 SOGA1O94964 1423 aa20.44■□□□□ 0.86
LAMB1-207ENST00000468999 RIMBP3CA6NJZ7 1639 aa20.44■□□□□ 0.86
LAMB1-207ENST00000468999 RIMBP3BA6NNM3 1639 aa20.44■□□□□ 0.86
LAMB1-207ENST00000468999 RIMBP3Q9UFD9 1639 aa20.44■□□□□ 0.86
LAMB1-207ENST00000468999 RAD54L2Q9Y4B4 1467 aa20.41■□□□□ 0.86
LAMB1-207ENST00000468999 SUPT5HO00267 1087 aaKnown RBP20.4■□□□□ 0.86
LAMB1-207ENST00000468999 TDRD9Q8NDG6 1382 aaKnown RBP20.4■□□□□ 0.86
LAMB1-207ENST00000468999 ARHGEF11O15085 1522 aa20.38■□□□□ 0.85
LAMB1-207ENST00000468999 CYB5RLQ6IPT4 315 aa20.38■□□□□ 0.85
LAMB1-207ENST00000468999 FGD5Q6ZNL6 1462 aa20.35■□□□□ 0.85
LAMB1-207ENST00000468999 CHD1O14646 1710 aa20.34■□□□□ 0.85
LAMB1-207ENST00000468999 CHMP7Q8WUX9 453 aaPredicted RBP20.32■□□□□ 0.84
LAMB1-207ENST00000468999 CUX1P39880 1505 aa20.29■□□□□ 0.84
LAMB1-207ENST00000468999 SNAPC4Q5SXM2 1469 aa20.26■□□□□ 0.83
LAMB1-207ENST00000468999 WDR97A6NE52 1622 aa20.25■□□□□ 0.83
LAMB1-207ENST00000468999 GRIN2BQ13224 1484 aa20.23■□□□□ 0.83
LAMB1-207ENST00000468999 TRHP20396 242 aaPredicted RBP20.22■□□□□ 0.83
LAMB1-207ENST00000468999 MAGI1Q96QZ7 1491 aaPredicted RBP20.2■□□□□ 0.82
LAMB1-207ENST00000468999 GAPVD1Q14C86 1478 aa20.17■□□□□ 0.82
LAMB1-207ENST00000468999 ARAP1Q96P48 1450 aa20.17■□□□□ 0.82
LAMB1-207ENST00000468999 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
LAMB1-207ENST00000468999 SYNJ2O15056 1496 aa20.15■□□□□ 0.82
LAMB1-207ENST00000468999 CLASP1Q7Z460 1538 aa20.09■□□□□ 0.81
LAMB1-207ENST00000468999 ABCA10Q8WWZ4 1543 aa20.09■□□□□ 0.81
LAMB1-207ENST00000468999 WRNQ14191 1432 aaPredicted RBP eCLIP20.08■□□□□ 0.8
LAMB1-207ENST00000468999 PBRM1Q86U86 1689 aa20.07■□□□□ 0.8
LAMB1-207ENST00000468999 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.79
LAMB1-207ENST00000468999 TOP2BQ02880 1626 aa19.96■□□□□ 0.79
LAMB1-207ENST00000468999 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
LAMB1-207ENST00000468999 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
LAMB1-207ENST00000468999 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
LAMB1-207ENST00000468999 ADAMTS12P58397 1594 aa19.88■□□□□ 0.77
LAMB1-207ENST00000468999 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
LAMB1-207ENST00000468999 NUP160Q12769 1436 aa19.85■□□□□ 0.77
LAMB1-207ENST00000468999 CEP170Q5SW79 1584 aa19.83■□□□□ 0.77
LAMB1-207ENST00000468999 ERCC6L2Q5T890 1561 aa19.79■□□□□ 0.76
LAMB1-207ENST00000468999 JPH4Q96JJ6 628 aa19.77■□□□□ 0.76
LAMB1-207ENST00000468999 PRG4Q92954 1404 aaPredicted RBP19.74■□□□□ 0.75
LAMB1-207ENST00000468999 SHROOM2Q13796 1616 aa19.73■□□□□ 0.75
LAMB1-207ENST00000468999 NPM1P06748 294 aaKnown RBP eCLIP19.68■□□□□ 0.74
LAMB1-207ENST00000468999 KIF27Q86VH2 1401 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms