RNA–Protein interactions for RNA: ENST00000468330.1

CMC1-207, Transcript of C-X9-C motif containing 1, humanhuman

TSL 4

Gene CMC1, Length 551 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-207ENST00000468330 TMC2Q8TDI7 906 aa11.72□□□□□ -0.53
CMC1-207ENST00000468330 C3orf67Q6ZVT6 689 aa11.71□□□□□ -0.53
CMC1-207ENST00000468330 DDX27Q96GQ7 796 aaKnown RBP11.69□□□□□ -0.54
CMC1-207ENST00000468330 CRISPLD2Q9H0B8 497 aa11.69□□□□□ -0.54
CMC1-207ENST00000468330 GPHNQ9NQX3 736 aaPredicted RBP11.67□□□□□ -0.54
CMC1-207ENST00000468330 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
CMC1-207ENST00000468330 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.64□□□□□ -0.55
CMC1-207ENST00000468330 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
CMC1-207ENST00000468330 E2F4Q16254 413 aa11.63□□□□□ -0.55
CMC1-207ENST00000468330 MFSD10Q14728 455 aa11.62□□□□□ -0.55
CMC1-207ENST00000468330 PPP1R15BQ5SWA1 713 aa11.62□□□□□ -0.55
CMC1-207ENST00000468330 BCANQ96GW7 911 aa11.61□□□□□ -0.55
CMC1-207ENST00000468330 DSG2Q14126 1118 aa11.6□□□□□ -0.55
CMC1-207ENST00000468330 NBR1Q14596 966 aa11.59□□□□□ -0.55
CMC1-207ENST00000468330 FOXK1P85037 733 aa11.58□□□□□ -0.56
CMC1-207ENST00000468330 TMEM92Q6UXU6 159 aa11.58□□□□□ -0.56
CMC1-207ENST00000468330 KCNV2Q8TDN2 545 aa11.58□□□□□ -0.56
CMC1-207ENST00000468330 POTEB2H3BUK9 544 aa11.57□□□□□ -0.56
CMC1-207ENST00000468330 PLPP6Q8IY26 295 aa11.57□□□□□ -0.56
CMC1-207ENST00000468330 KIF3CO14782 793 aa11.56□□□□□ -0.56
CMC1-207ENST00000468330 SCUBE2Q9NQ36 999 aa11.56□□□□□ -0.56
CMC1-207ENST00000468330 MAMSTRQ6ZN01 415 aa11.55□□□□□ -0.56
CMC1-207ENST00000468330 POTEJP0CG39 1038 aa11.54□□□□□ -0.56
CMC1-207ENST00000468330 ARHGEF1Q92888 912 aaKnown RBP11.52□□□□□ -0.57
CMC1-207ENST00000468330 CAMK2BQ13554 666 aa11.5□□□□□ -0.57
CMC1-207ENST00000468330 SLAIN1Q8ND83 568 aa11.5□□□□□ -0.57
CMC1-207ENST00000468330 UPF1Q92900 1129 aaKnown RBP eCLIP11.46□□□□□ -0.57
CMC1-207ENST00000468330 EMILIN3Q9NT22 766 aa11.45□□□□□ -0.58
CMC1-207ENST00000468330 MAP3K9P80192 1104 aa11.44□□□□□ -0.58
CMC1-207ENST00000468330 LHX8Q68G74 356 aa11.44□□□□□ -0.58
CMC1-207ENST00000468330 DPYSL4O14531 572 aa11.43□□□□□ -0.58
CMC1-207ENST00000468330 TBC1D12O60347 775 aa11.4□□□□□ -0.58
CMC1-207ENST00000468330 ARIH1Q9Y4X5 557 aaPredicted RBP11.4□□□□□ -0.58
CMC1-207ENST00000468330 TULP1O00294 542 aaPredicted RBP11.37□□□□□ -0.59
CMC1-207ENST00000468330 DOK7Q18PE1 504 aa11.37□□□□□ -0.59
CMC1-207ENST00000468330 OXER1Q8TDS5 423 aa11.37□□□□□ -0.59
CMC1-207ENST00000468330 SEMA3EO15041 775 aa11.36□□□□□ -0.59
CMC1-207ENST00000468330 OTUD5Q96G74 571 aa11.36□□□□□ -0.59
CMC1-207ENST00000468330 SPDYE16A6NNV3 312 aaPredicted RBP11.35□□□□□ -0.59
CMC1-207ENST00000468330 SLC34A2O95436 690 aa11.35□□□□□ -0.59
CMC1-207ENST00000468330 ZNF316A6NFI3 1004 aaPredicted RBP11.34□□□□□ -0.59
CMC1-207ENST00000468330 RIMBP2O15034 1052 aa11.34□□□□□ -0.59
CMC1-207ENST00000468330 ZNF710Q8N1W2 664 aa11.34□□□□□ -0.59
CMC1-207ENST00000468330 PTCD2Q8WV60 388 aaKnown RBP11.34□□□□□ -0.59
CMC1-207ENST00000468330 SNPHO15079 494 aa11.33□□□□□ -0.6
CMC1-207ENST00000468330 PDIA6Q15084 440 aa11.32□□□□□ -0.6
CMC1-207ENST00000468330 SMYD5Q6GMV2 418 aa11.32□□□□□ -0.6
CMC1-207ENST00000468330 EVI5O60447 810 aa11.31□□□□□ -0.6
CMC1-207ENST00000468330 PCDHGA4Q9Y5G9 962 aa11.31□□□□□ -0.6
CMC1-207ENST00000468330 TESPA1A2RU30 521 aaPredicted RBP11.29□□□□□ -0.6
CMC1-207ENST00000468330 HOXB3P14651 431 aaPredicted RBP11.29□□□□□ -0.6
CMC1-207ENST00000468330 GRXCR2A6NFK2 248 aa11.26□□□□□ -0.61
CMC1-207ENST00000468330 MLLT3P42568 568 aaPredicted RBP11.26□□□□□ -0.61
CMC1-207ENST00000468330 ARSIQ5FYB1 569 aa11.26□□□□□ -0.61
CMC1-207ENST00000468330 ZSWIM6Q9HCJ5 1215 aa11.25□□□□□ -0.61
CMC1-207ENST00000468330 DDX12PQ92771 950 aa11.24□□□□□ -0.61
CMC1-207ENST00000468330 NUDT7P0C024 238 aa11.23□□□□□ -0.61
CMC1-207ENST00000468330 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.23□□□□□ -0.61
CMC1-207ENST00000468330 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.619e-7■■■□□ 17.4
CMC1-207ENST00000468330 LMOD2Q6P5Q4 547 aa11.22□□□□□ -0.61
CMC1-207ENST00000468330 TPRNQ4KMQ1 711 aa11.2□□□□□ -0.62
CMC1-207ENST00000468330 GPR153Q6NV75 609 aa11.2□□□□□ -0.62
CMC1-207ENST00000468330 PTGER2P43116 358 aa11.19□□□□□ -0.62
CMC1-207ENST00000468330 ANO8Q9HCE9 1232 aaPredicted RBP11.19□□□□□ -0.62
CMC1-207ENST00000468330 HOXB1P14653 301 aaPredicted RBP11.15□□□□□ -0.62
CMC1-207ENST00000468330 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
CMC1-207ENST00000468330 KDM4FA0A1W2PPD8 638 aa11.13□□□□□ -0.63
CMC1-207ENST00000468330 PHF14O94880 888 aa11.13□□□□□ -0.63
CMC1-207ENST00000468330 PRKCSHP14314 528 aaPredicted RBP11.13□□□□□ -0.63
CMC1-207ENST00000468330 ZNF454Q8N9F8 522 aa11.13□□□□□ -0.63
CMC1-207ENST00000468330 FAM163AQ96GL9 167 aaPredicted RBP11.13□□□□□ -0.63
CMC1-207ENST00000468330 OSBPP22059 807 aa11.12□□□□□ -0.63
CMC1-207ENST00000468330 EPAS1Q99814 870 aa11.12□□□□□ -0.63
CMC1-207ENST00000468330 LHX6Q9UPM6 363 aa11.12□□□□□ -0.63
CMC1-207ENST00000468330 NUTM2FA1L443 756 aa11.11□□□□□ -0.63
CMC1-207ENST00000468330 GPIHBP1Q8IV16 184 aa11.11□□□□□ -0.63
CMC1-207ENST00000468330 RBM33Q96EV2 1170 aaKnown RBP11.11□□□□□ -0.63
CMC1-207ENST00000468330 JPH4Q96JJ6 628 aa11.11□□□□□ -0.63
CMC1-207ENST00000468330 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
CMC1-207ENST00000468330 MAP3K7O43318 606 aa11.09□□□□□ -0.63
CMC1-207ENST00000468330 ST18O60284 1047 aa11.09□□□□□ -0.63
CMC1-207ENST00000468330 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
CMC1-207ENST00000468330 PSDA5PKW4 1024 aaPredicted RBP11.08□□□□□ -0.64
CMC1-207ENST00000468330 FOSBP53539 338 aa11.08□□□□□ -0.64
CMC1-207ENST00000468330 FBXW7Q969H0 707 aa11.08□□□□□ -0.64
CMC1-207ENST00000468330 PPP4R3BQ5MIZ7 849 aa11.07□□□□□ -0.64
CMC1-207ENST00000468330 ZDHHC16Q969W1 377 aa11.06□□□□□ -0.64
CMC1-207ENST00000468330 ERBB3P21860 1342 aa11.06□□□□□ -0.64
CMC1-207ENST00000468330 EMP3P54852 163 aa11.05□□□□□ -0.64
CMC1-207ENST00000468330 EN1Q05925 392 aaPredicted RBP11.05□□□□□ -0.64
CMC1-207ENST00000468330 ZC3H15Q8WU90 426 aaKnown RBP11.05□□□□□ -0.64
CMC1-207ENST00000468330 PRIM1P49642 420 aaKnown RBP11.04□□□□□ -0.64
CMC1-207ENST00000468330 MARVELD3Q96A59 401 aa11.04□□□□□ -0.64
CMC1-207ENST00000468330 FCHSD2O94868 740 aa11□□□□□ -0.65
CMC1-207ENST00000468330 TSR1Q2NL82 804 aaKnown RBP11□□□□□ -0.65
CMC1-207ENST00000468330 ADAM33Q9BZ11 813 aa11□□□□□ -0.65
CMC1-207ENST00000468330 VARS2Q5ST30 1063 aaKnown RBP10.99□□□□□ -0.65
CMC1-207ENST00000468330 KRI1Q8N9T8 703 aaKnown RBP10.99□□□□□ -0.65
CMC1-207ENST00000468330 FAM205CA6NFA0 338 aa10.98□□□□□ -0.65
CMC1-207ENST00000468330 C6orf132Q5T0Z8 1188 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms