RNA–Protein interactions for RNA: ENST00000468275.5

APTX-215, Transcript of aprataxin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene APTX, Length 1,455 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-215ENST00000468275 PLPPR3Q6T4P5 718 aa18.33■□□□□ 0.52
APTX-215ENST00000468275 FANCAO15360 1455 aa18.31■□□□□ 0.52
APTX-215ENST00000468275 CFAP74Q9C0B2 1584 aa18.31■□□□□ 0.52
APTX-215ENST00000468275 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
APTX-215ENST00000468275 ZMYM4Q5VZL5 1548 aa18.3■□□□□ 0.52
APTX-215ENST00000468275 HECW1Q76N89 1606 aa18.3■□□□□ 0.52
APTX-215ENST00000468275 SIGLEC1Q9BZZ2 1709 aa18.3■□□□□ 0.52
APTX-215ENST00000468275 PLEKHD1A6NEE1 506 aa18.29■□□□□ 0.52
APTX-215ENST00000468275 ZFYVE16Q7Z3T8 1539 aa18.28■□□□□ 0.52
APTX-215ENST00000468275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.28■□□□□ 0.52
APTX-215ENST00000468275 YEATS2Q9ULM3 1422 aa18.28■□□□□ 0.52
APTX-215ENST00000468275 TTC37Q6PGP7 1564 aa18.28■□□□□ 0.52
APTX-215ENST00000468275 RRBP1Q9P2E9 1410 aaKnown RBP18.28■□□□□ 0.52
APTX-215ENST00000468275 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
APTX-215ENST00000468275 TIAM1Q13009 1591 aa18.26■□□□□ 0.51
APTX-215ENST00000468275 CDK13Q14004 1512 aaKnown RBP18.26■□□□□ 0.51
APTX-215ENST00000468275 CASKIN1Q8WXD9 1431 aa18.25■□□□□ 0.51
APTX-215ENST00000468275 CERKQ8TCT0 537 aa18.25■□□□□ 0.51
APTX-215ENST00000468275 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
APTX-215ENST00000468275 MLECQ14165 292 aa18.24■□□□□ 0.51
APTX-215ENST00000468275 MAGI2Q86UL8 1455 aa18.23■□□□□ 0.51
APTX-215ENST00000468275 FER1L4A9Z1Z3 1794 aa18.23■□□□□ 0.51
APTX-215ENST00000468275 FYCO1Q9BQS8 1478 aa18.22■□□□□ 0.51
APTX-215ENST00000468275 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
APTX-215ENST00000468275 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
APTX-215ENST00000468275 CCDC18Q5T9S5 1454 aa18.19■□□□□ 0.5
APTX-215ENST00000468275 SCAPERQ9BY12 1400 aa18.18■□□□□ 0.5
APTX-215ENST00000468275 ARHGEF12Q9NZN5 1544 aa18.17■□□□□ 0.5
APTX-215ENST00000468275 PLCH2O75038 1416 aa18.15■□□□□ 0.5
APTX-215ENST00000468275 PREX1Q8TCU6 1659 aa18.15■□□□□ 0.5
APTX-215ENST00000468275 LRRIQ1Q96JM4 1722 aa18.15■□□□□ 0.5
APTX-215ENST00000468275 SENP3Q9H4L4 574 aaPredicted RBP18.14■□□□□ 0.5
APTX-215ENST00000468275 ATP10AO60312 1499 aa18.14■□□□□ 0.49
APTX-215ENST00000468275 C9orf84Q5VXU9 1444 aa18.14■□□□□ 0.49
APTX-215ENST00000468275 LRRC9Q6ZRR7 1453 aa18.13■□□□□ 0.49
APTX-215ENST00000468275 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
APTX-215ENST00000468275 KANK4Q5T7N3 995 aaPredicted RBP18.12■□□□□ 0.49
APTX-215ENST00000468275 CEBPAP49715 358 aaPredicted RBP18.11■□□□□ 0.49
APTX-215ENST00000468275 CLSPNQ9HAW4 1339 aa18.1■□□□□ 0.49
APTX-215ENST00000468275 DISP3Q9P2K9 1392 aa18.09■□□□□ 0.49
APTX-215ENST00000468275 KIF14Q15058 1648 aa18.08■□□□□ 0.49
APTX-215ENST00000468275 MYO5CQ9NQX4 1742 aa18.08■□□□□ 0.49
APTX-215ENST00000468275 STRCQ7RTU9 1775 aa18.08■□□□□ 0.49
APTX-215ENST00000468275 ILDR2Q71H61 639 aa18.07■□□□□ 0.48
APTX-215ENST00000468275 CCNB3Q8WWL7 1395 aa18.07■□□□□ 0.48
APTX-215ENST00000468275 EFCAB2Q5VUJ9 269 aa18.07■□□□□ 0.48
APTX-215ENST00000468275 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
APTX-215ENST00000468275 ZNF518AQ6AHZ1 1483 aa18.05■□□□□ 0.48
APTX-215ENST00000468275 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
APTX-215ENST00000468275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.03■□□□□ 0.48
APTX-215ENST00000468275 KDM5CP41229 1560 aa18.03■□□□□ 0.48
APTX-215ENST00000468275 SOCS7O14512 581 aa18.01■□□□□ 0.47
APTX-215ENST00000468275 AFAP1Q8N556 730 aa18.01■□□□□ 0.47
APTX-215ENST00000468275 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
APTX-215ENST00000468275 ARHGAP5Q13017 1502 aa18.01■□□□□ 0.47
APTX-215ENST00000468275 MYT1LQ9UL68 1186 aa17.99■□□□□ 0.47
APTX-215ENST00000468275 MTUS2Q5JR59 1369 aa17.99■□□□□ 0.47
APTX-215ENST00000468275 SETD1BQ9UPS6 1966 aaKnown RBP17.99■□□□□ 0.47
APTX-215ENST00000468275 REREQ9P2R6 1566 aa17.98■□□□□ 0.47
APTX-215ENST00000468275 PTPRTO14522 1441 aa17.97■□□□□ 0.47
APTX-215ENST00000468275 SPATA31D1Q6ZQQ2 1576 aa17.97■□□□□ 0.47
APTX-215ENST00000468275 C3P01024 1663 aa17.97■□□□□ 0.47
APTX-215ENST00000468275 ABCA6Q8N139 1617 aa17.97■□□□□ 0.47
APTX-215ENST00000468275 EHBP1L1Q8N3D4 1523 aa17.96■□□□□ 0.47
APTX-215ENST00000468275 MLH3Q9UHC1 1453 aa17.94■□□□□ 0.46
APTX-215ENST00000468275 LTBP4Q8N2S1 1624 aa17.93■□□□□ 0.46
APTX-215ENST00000468275 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
APTX-215ENST00000468275 AGLP35573 1532 aa17.92■□□□□ 0.46
APTX-215ENST00000468275 PREX2Q70Z35 1606 aa17.92■□□□□ 0.46
APTX-215ENST00000468275 CDC42BPBQ9Y5S2 1711 aa17.92■□□□□ 0.46
APTX-215ENST00000468275 TRAPPC8Q9Y2L5 1435 aa17.91■□□□□ 0.46
APTX-215ENST00000468275 ESF1Q9H501 851 aaKnown RBP17.91■□□□□ 0.46
APTX-215ENST00000468275 ABCC1P33527 1531 aa17.9■□□□□ 0.46
APTX-215ENST00000468275 NCOA1Q15788 1441 aa17.9■□□□□ 0.46
APTX-215ENST00000468275 IQSEC2Q5JU85 1478 aa17.89■□□□□ 0.45
APTX-215ENST00000468275 GPATCH8Q9UKJ3 1502 aaKnown RBP17.89■□□□□ 0.45
APTX-215ENST00000468275 CDC42BPAQ5VT25 1732 aa17.88■□□□□ 0.45
APTX-215ENST00000468275 SUPT6HQ7KZ85 1726 aaKnown RBP17.88■□□□□ 0.45
APTX-215ENST00000468275 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
APTX-215ENST00000468275 CNTLNQ9NXG0 1405 aa17.87■□□□□ 0.45
APTX-215ENST00000468275 KIDINS220Q9ULH0 1771 aa17.85■□□□□ 0.45
APTX-215ENST00000468275 NCOA2Q15596 1464 aa17.84■□□□□ 0.45
APTX-215ENST00000468275 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
APTX-215ENST00000468275 CFDP1Q9UEE9 299 aaPredicted RBP17.83■□□□□ 0.45
APTX-215ENST00000468275 FGD6Q6ZV73 1430 aa17.82■□□□□ 0.44
APTX-215ENST00000468275 NPATQ14207 1427 aa17.81■□□□□ 0.44
APTX-215ENST00000468275 ZNF777Q9ULD5 760 aaPredicted RBP17.81■□□□□ 0.44
APTX-215ENST00000468275 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
APTX-215ENST00000468275 SETD5Q9C0A6 1442 aa17.8■□□□□ 0.44
APTX-215ENST00000468275 SAMD9LQ8IVG5 1584 aa17.8■□□□□ 0.44
APTX-215ENST00000468275 PLEKHH2Q8IVE3 1493 aa17.79■□□□□ 0.44
APTX-215ENST00000468275 KIAA1107Q9UPP5 1409 aa17.78■□□□□ 0.44
APTX-215ENST00000468275 ZMYM3Q14202 1370 aa17.78■□□□□ 0.44
APTX-215ENST00000468275 ZNF335Q9H4Z2 1342 aaPredicted RBP17.78■□□□□ 0.44
APTX-215ENST00000468275 NCKAP5LQ9HCH0 1330 aa17.78■□□□□ 0.44
APTX-215ENST00000468275 MYOM3Q5VTT5 1437 aa17.77■□□□□ 0.44
APTX-215ENST00000468275 RAB3GAP2Q9H2M9 1393 aa17.77■□□□□ 0.44
APTX-215ENST00000468275 SYCP2Q9BX26 1530 aa17.76■□□□□ 0.43
APTX-215ENST00000468275 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
APTX-215ENST00000468275 TCOF1Q13428 1488 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms