RNA–Protein interactions for RNA: ENST00000467716.1

C1GALT1-206, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 5

Gene C1GALT1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-206ENST00000467716 PLCH2O75038 1416 aa28.13■■■□□ 2.09
C1GALT1-206ENST00000467716 MLECQ14165 292 aa28.13■■■□□ 2.09
C1GALT1-206ENST00000467716 HECW1Q76N89 1606 aa28.13■■■□□ 2.09
C1GALT1-206ENST00000467716 CDK11AQ9UQ88 783 aaPredicted RBP28.12■■■□□ 2.09
C1GALT1-206ENST00000467716 MAGI2Q86UL8 1455 aa28.1■■■□□ 2.09
C1GALT1-206ENST00000467716 LMTK3Q96Q04 1460 aa28.09■■■□□ 2.09
C1GALT1-206ENST00000467716 EFCAB2Q5VUJ9 269 aa28.08■■■□□ 2.09
C1GALT1-206ENST00000467716 CEP162Q5TB80 1403 aa28.08■■■□□ 2.09
C1GALT1-206ENST00000467716 FBXO41Q8TF61 875 aa28.06■■■□□ 2.08
C1GALT1-206ENST00000467716 LOC105371045A0A1W2PR82 267 aa28.05■■■□□ 2.08
C1GALT1-206ENST00000467716 SIGLEC1Q9BZZ2 1709 aa28.02■■■□□ 2.08
C1GALT1-206ENST00000467716 HSPA2P54652 639 aa28.02■■■□□ 2.08
C1GALT1-206ENST00000467716 MYO5CQ9NQX4 1742 aa28.01■■■□□ 2.07
C1GALT1-206ENST00000467716 KIF14Q15058 1648 aa28■■■□□ 2.07
C1GALT1-206ENST00000467716 TROQ12816 1431 aaPredicted RBP28■■■□□ 2.07
C1GALT1-206ENST00000467716 CASKIN1Q8WXD9 1431 aa27.99■■■□□ 2.07
C1GALT1-206ENST00000467716 ATP10AO60312 1499 aa27.98■■■□□ 2.07
C1GALT1-206ENST00000467716 MYT1LQ9UL68 1186 aa27.98■■■□□ 2.07
C1GALT1-206ENST00000467716 ARHGAP5Q13017 1502 aa27.97■■■□□ 2.07
C1GALT1-206ENST00000467716 C9orf84Q5VXU9 1444 aa27.96■■■□□ 2.07
C1GALT1-206ENST00000467716 FYCO1Q9BQS8 1478 aa27.95■■■□□ 2.07
C1GALT1-206ENST00000467716 FER1L4A9Z1Z3 1794 aa27.94■■■□□ 2.06
C1GALT1-206ENST00000467716 CCDC18Q5T9S5 1454 aa27.94■■■□□ 2.06
C1GALT1-206ENST00000467716 ZNF518AQ6AHZ1 1483 aa27.93■■■□□ 2.06
C1GALT1-206ENST00000467716 AFAP1Q8N556 730 aa27.92■■■□□ 2.06
C1GALT1-206ENST00000467716 ARHGEF12Q9NZN5 1544 aa27.88■■■□□ 2.05
C1GALT1-206ENST00000467716 LRRIQ1Q96JM4 1722 aa27.85■■■□□ 2.05
C1GALT1-206ENST00000467716 CEBPAP49715 358 aaPredicted RBP27.84■■■□□ 2.05
C1GALT1-206ENST00000467716 KDM5CP41229 1560 aa27.83■■■□□ 2.05
C1GALT1-206ENST00000467716 DIP2CQ9Y2E4 1556 aa27.77■■■□□ 2.04
C1GALT1-206ENST00000467716 CDC42BPBQ9Y5S2 1711 aa27.77■■■□□ 2.04
C1GALT1-206ENST00000467716 VPS8Q8N3P4 1428 aa27.76■■■□□ 2.04
C1GALT1-206ENST00000467716 PREX2Q70Z35 1606 aa27.76■■■□□ 2.03
C1GALT1-206ENST00000467716 TRAPPC8Q9Y2L5 1435 aa27.75■■■□□ 2.03
C1GALT1-206ENST00000467716 ABCC1P33527 1531 aa27.74■■■□□ 2.03
C1GALT1-206ENST00000467716 ESF1Q9H501 851 aaKnown RBP27.74■■■□□ 2.03
C1GALT1-206ENST00000467716 MLH3Q9UHC1 1453 aa27.74■■■□□ 2.03
C1GALT1-206ENST00000467716 PREX1Q8TCU6 1659 aa27.73■■■□□ 2.03
C1GALT1-206ENST00000467716 ABCA6Q8N139 1617 aa27.73■■■□□ 2.03
C1GALT1-206ENST00000467716 ZNF777Q9ULD5 760 aaPredicted RBP27.72■■■□□ 2.03
C1GALT1-206ENST00000467716 CERKQ8TCT0 537 aa27.71■■■□□ 2.03
C1GALT1-206ENST00000467716 UHRF1BP1Q6BDS2 1440 aa27.7■■■□□ 2.03
C1GALT1-206ENST00000467716 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
C1GALT1-206ENST00000467716 ITSN2Q9NZM3 1697 aa27.68■■■□□ 2.02
C1GALT1-206ENST00000467716 MTUS2Q5JR59 1369 aa27.63■■■□□ 2.01
C1GALT1-206ENST00000467716 AGLP35573 1532 aa27.63■■■□□ 2.01
C1GALT1-206ENST00000467716 CDC42BPAQ5VT25 1732 aa27.63■■■□□ 2.01
C1GALT1-206ENST00000467716 DMRT2Q9Y5R5 561 aa27.62■■■□□ 2.01
C1GALT1-206ENST00000467716 KIDINS220Q9ULH0 1771 aa27.59■■■□□ 2.01
C1GALT1-206ENST00000467716 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
C1GALT1-206ENST00000467716 SYCP2Q9BX26 1530 aa27.58■■■□□ 2.01
C1GALT1-206ENST00000467716 HNRNPMP52272 730 aaKnown RBP eCLIP27.58■■■□□ 2.015e-7■■■■□ 25.9
C1GALT1-206ENST00000467716 SPAG9O60271 1321 aaKnown RBP27.58■■■□□ 2.01
C1GALT1-206ENST00000467716 C3P01024 1663 aa27.58■■■□□ 2.01
C1GALT1-206ENST00000467716 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
C1GALT1-206ENST00000467716 SAMD9LQ8IVG5 1584 aa27.57■■■□□ 2
C1GALT1-206ENST00000467716 TIAM1Q13009 1591 aa27.56■■■□□ 2
C1GALT1-206ENST00000467716 CFDP1Q9UEE9 299 aaPredicted RBP27.55■■■□□ 2
C1GALT1-206ENST00000467716 CNTLNQ9NXG0 1405 aa27.55■■■□□ 2
C1GALT1-206ENST00000467716 APLP2Q06481 763 aa27.54■■■□□ 2
C1GALT1-206ENST00000467716 SETD1BQ9UPS6 1966 aaKnown RBP27.54■■■□□ 2
C1GALT1-206ENST00000467716 STRCQ7RTU9 1775 aa27.53■■■□□ 2
C1GALT1-206ENST00000467716 MAP3K1Q13233 1512 aa27.53■■■□□ 2
C1GALT1-206ENST00000467716 CCNB3Q8WWL7 1395 aa27.53■■■□□ 2
C1GALT1-206ENST00000467716 PLEKHH2Q8IVE3 1493 aa27.48■■□□□ 1.99
C1GALT1-206ENST00000467716 ATP7AQ04656 1500 aa27.46■■□□□ 1.99
C1GALT1-206ENST00000467716 KIAA1107Q9UPP5 1409 aa27.46■■□□□ 1.99
C1GALT1-206ENST00000467716 SUPT6HQ7KZ85 1726 aaKnown RBP27.45■■□□□ 1.99
C1GALT1-206ENST00000467716 PTPRTO14522 1441 aa27.45■■□□□ 1.98
C1GALT1-206ENST00000467716 ZMYM3Q14202 1370 aa27.44■■□□□ 1.98
C1GALT1-206ENST00000467716 LRRC9Q6ZRR7 1453 aa27.43■■□□□ 1.98
C1GALT1-206ENST00000467716 A2MP01023 1474 aa27.42■■□□□ 1.98
C1GALT1-206ENST00000467716 GGT6Q6P531 493 aa27.41■■□□□ 1.98
C1GALT1-206ENST00000467716 NPATQ14207 1427 aa27.41■■□□□ 1.98
C1GALT1-206ENST00000467716 NCOA1Q15788 1441 aa27.4■■□□□ 1.98
C1GALT1-206ENST00000467716 INO80Q9ULG1 1556 aaPredicted RBP27.39■■□□□ 1.98
C1GALT1-206ENST00000467716 MROH2AA6NES4 1674 aa27.38■■□□□ 1.97
C1GALT1-206ENST00000467716 ZNF644Q9H582 1327 aaPredicted RBP27.38■■□□□ 1.97
C1GALT1-206ENST00000467716 PLXNC1O60486 1568 aa27.36■■□□□ 1.97
C1GALT1-206ENST00000467716 NCOA2Q15596 1464 aa27.36■■□□□ 1.97
C1GALT1-206ENST00000467716 CAMSAP1Q5T5Y3 1602 aa27.35■■□□□ 1.97
C1GALT1-206ENST00000467716 CLTCQ00610 1675 aaKnown RBP27.35■■□□□ 1.97
C1GALT1-206ENST00000467716 NCKAP5LQ9HCH0 1330 aa27.31■■□□□ 1.96
C1GALT1-206ENST00000467716 PTPRKQ15262 1439 aa27.28■■□□□ 1.96
C1GALT1-206ENST00000467716 KANK4Q5T7N3 995 aaPredicted RBP27.28■■□□□ 1.96
C1GALT1-206ENST00000467716 LTBP4Q8N2S1 1624 aa27.27■■□□□ 1.96
C1GALT1-206ENST00000467716 MBD5Q9P267 1494 aa27.27■■□□□ 1.96
C1GALT1-206ENST00000467716 ADGBQ8N7X0 1667 aa27.27■■□□□ 1.96
C1GALT1-206ENST00000467716 DISP3Q9P2K9 1392 aa27.26■■□□□ 1.95
C1GALT1-206ENST00000467716 PPP6R1Q9UPN7 881 aa27.25■■□□□ 1.95
C1GALT1-206ENST00000467716 MYO3AQ8NEV4 1616 aa27.25■■□□□ 1.95
C1GALT1-206ENST00000467716 RTEL1-TNFRSF6BF6WH68 1400 aa27.23■■□□□ 1.95
C1GALT1-206ENST00000467716 CEP170BQ9Y4F5 1589 aaPredicted RBP27.22■■□□□ 1.95
C1GALT1-206ENST00000467716 PKD2Q13563 968 aa27.21■■□□□ 1.95
C1GALT1-206ENST00000467716 DHX29Q7Z478 1369 aaKnown RBP27.21■■□□□ 1.95
C1GALT1-206ENST00000467716 ZNF335Q9H4Z2 1342 aaPredicted RBP27.2■■□□□ 1.95
C1GALT1-206ENST00000467716 ZNF142P52746 1687 aaPredicted RBP27.2■■□□□ 1.94
C1GALT1-206ENST00000467716 KIF3BO15066 747 aa27.19■■□□□ 1.94
C1GALT1-206ENST00000467716 PLA2R1Q13018 1463 aa27.19■■□□□ 1.94
C1GALT1-206ENST00000467716 IQSEC2Q5JU85 1478 aa27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms