RNA–Protein interactions for RNA: ENST00000467716.1

C1GALT1-206, Transcript of core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1, humanhuman

TSL 5

Gene C1GALT1, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1GALT1-206ENST00000467716 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
C1GALT1-206ENST00000467716 ABCC9O60706 1549 aa38.63■■■■□ 3.78
C1GALT1-206ENST00000467716 CCDC180Q9P1Z9 1646 aa38.34■■■■□ 3.73
C1GALT1-206ENST00000467716 RB1CC1Q8TDY2 1594 aa36.64■■■■□ 3.46
C1GALT1-206ENST00000467716 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
C1GALT1-206ENST00000467716 DNAJC5BQ9UF47 199 aa36.33■■■■□ 3.41
C1GALT1-206ENST00000467716 NACADO15069 1562 aa36.32■■■■□ 3.41
C1GALT1-206ENST00000467716 PABPN1Q86U42 306 aaKnown RBP eCLIP35.99■■■■□ 3.35
C1GALT1-206ENST00000467716 MYO15BQ96JP2 1530 aa35.72■■■■□ 3.31
C1GALT1-206ENST00000467716 UNC13AQ9UPW8 1703 aa35.71■■■■□ 3.31
C1GALT1-206ENST00000467716 BICRAQ9NZM4 1560 aa35.53■■■■□ 3.28
C1GALT1-206ENST00000467716 ZCCHC6Q5VYS8 1495 aaKnown RBP35.38■■■■□ 3.25
C1GALT1-206ENST00000467716 DCAF1Q9Y4B6 1507 aa35.22■■■■□ 3.23
C1GALT1-206ENST00000467716 SCRIBQ14160 1630 aa35.05■■■■□ 3.2
C1GALT1-206ENST00000467716 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
C1GALT1-206ENST00000467716 CC2D2AQ9P2K1 1620 aa34.82■■■■□ 3.16
C1GALT1-206ENST00000467716 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
C1GALT1-206ENST00000467716 EIF4G1Q04637 1599 aaKnown RBP34.71■■■■□ 3.15
C1GALT1-206ENST00000467716 NCAPD3P42695 1498 aa33.54■■■□□ 2.96
C1GALT1-206ENST00000467716 DNAJC5Q9H3Z4 198 aa33.46■■■□□ 2.95
C1GALT1-206ENST00000467716 ATAD2BQ9ULI0 1458 aa33.44■■■□□ 2.94
C1GALT1-206ENST00000467716 ERCC6Q03468 1493 aa33.41■■■□□ 2.94
C1GALT1-206ENST00000467716 SMARCA4P51532 1647 aa33.36■■■□□ 2.93
C1GALT1-206ENST00000467716 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
C1GALT1-206ENST00000467716 CUX2O14529 1486 aa33.3■■■□□ 2.92
C1GALT1-206ENST00000467716 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
C1GALT1-206ENST00000467716 BAZ1AQ9NRL2 1556 aaPredicted RBP33.18■■■□□ 2.9
C1GALT1-206ENST00000467716 BAZ1BQ9UIG0 1483 aaKnown RBP33.16■■■□□ 2.9
C1GALT1-206ENST00000467716 NESP48681 1621 aa33.12■■■□□ 2.89
C1GALT1-206ENST00000467716 PEG3Q9GZU2 1588 aa32.97■■■□□ 2.87
C1GALT1-206ENST00000467716 MROH2BQ7Z745 1585 aa32.94■■■□□ 2.86
C1GALT1-206ENST00000467716 LAMC3Q9Y6N6 1575 aa32.81■■■□□ 2.84
C1GALT1-206ENST00000467716 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
C1GALT1-206ENST00000467716 PDS5BQ9NTI5 1447 aa32.69■■■□□ 2.82
C1GALT1-206ENST00000467716 KIF21AQ7Z4S6 1674 aa32.63■■■□□ 2.81
C1GALT1-206ENST00000467716 CADPSQ9ULU8 1353 aa32.56■■■□□ 2.8
C1GALT1-206ENST00000467716 WIZO95785 1651 aa32.53■■■□□ 2.8
C1GALT1-206ENST00000467716 MRC2Q9UBG0 1479 aa32.41■■■□□ 2.78
C1GALT1-206ENST00000467716 WDR62O43379 1518 aa32.29■■■□□ 2.76
C1GALT1-206ENST00000467716 CEP164Q9UPV0 1460 aa32.27■■■□□ 2.76
C1GALT1-206ENST00000467716 RSF1Q96T23 1441 aaPredicted RBP32.21■■■□□ 2.75
C1GALT1-206ENST00000467716 FANCD2Q9BXW9 1451 aa32.21■■■□□ 2.75
C1GALT1-206ENST00000467716 CFTRP13569 1480 aa32.13■■■□□ 2.73
C1GALT1-206ENST00000467716 TOP2AP11388 1531 aaKnown RBP32.11■■■□□ 2.73
C1GALT1-206ENST00000467716 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
C1GALT1-206ENST00000467716 URB2Q14146 1524 aaKnown RBP31.93■■■□□ 2.7
C1GALT1-206ENST00000467716 OSCARQ8IYS5 282 aa31.81■■■□□ 2.68
C1GALT1-206ENST00000467716 CCDC88BA6NC98 1476 aa31.77■■■□□ 2.68
C1GALT1-206ENST00000467716 PRDM2Q13029 1718 aa31.71■■■□□ 2.67
C1GALT1-206ENST00000467716 IFT140Q96RY7 1462 aa31.6■■■□□ 2.65
C1GALT1-206ENST00000467716 ZNF608Q9ULD9 1512 aaPredicted RBP31.58■■■□□ 2.65
C1GALT1-206ENST00000467716 TOPBP1Q92547 1522 aa31.56■■■□□ 2.64
C1GALT1-206ENST00000467716 ABCC8Q09428 1581 aa31.47■■■□□ 2.63
C1GALT1-206ENST00000467716 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
C1GALT1-206ENST00000467716 EIF4G3O43432 1585 aaKnown RBP31.38■■■□□ 2.61
C1GALT1-206ENST00000467716 SUPT5HO00267 1087 aaKnown RBP31.37■■■□□ 2.61
C1GALT1-206ENST00000467716 RIMBP3CA6NJZ7 1639 aa31.36■■■□□ 2.61
C1GALT1-206ENST00000467716 RIMBP3BA6NNM3 1639 aa31.36■■■□□ 2.61
C1GALT1-206ENST00000467716 RIMBP3Q9UFD9 1639 aa31.36■■■□□ 2.61
C1GALT1-206ENST00000467716 AQRO60306 1485 aaKnown RBP eCLIP31.29■■■□□ 2.68e-7■■■□□ 16.1
C1GALT1-206ENST00000467716 ARHGEF11O15085 1522 aa31.27■■■□□ 2.6
C1GALT1-206ENST00000467716 TARBP1Q13395 1621 aaKnown RBP31.24■■■□□ 2.59
C1GALT1-206ENST00000467716 POLA1P09884 1462 aaPredicted RBP31.24■■■□□ 2.59
C1GALT1-206ENST00000467716 FBLN2P98095 1184 aa31.22■■■□□ 2.59
C1GALT1-206ENST00000467716 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
C1GALT1-206ENST00000467716 CHD1O14646 1710 aa31.14■■■□□ 2.58
C1GALT1-206ENST00000467716 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
C1GALT1-206ENST00000467716 SOGA1O94964 1423 aa31.12■■■□□ 2.57
C1GALT1-206ENST00000467716 TDRD9Q8NDG6 1382 aaKnown RBP31.1■■■□□ 2.57
C1GALT1-206ENST00000467716 FGD5Q6ZNL6 1462 aa31.03■■■□□ 2.56
C1GALT1-206ENST00000467716 SNAPC4Q5SXM2 1469 aa30.97■■■□□ 2.55
C1GALT1-206ENST00000467716 CUX1P39880 1505 aa30.96■■■□□ 2.55
C1GALT1-206ENST00000467716 ARAP1Q96P48 1450 aa30.95■■■□□ 2.55
C1GALT1-206ENST00000467716 CHMP7Q8WUX9 453 aaPredicted RBP30.92■■■□□ 2.54
C1GALT1-206ENST00000467716 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
C1GALT1-206ENST00000467716 TRHP20396 242 aaPredicted RBP30.88■■■□□ 2.53
C1GALT1-206ENST00000467716 GRIN2BQ13224 1484 aa30.85■■■□□ 2.53
C1GALT1-206ENST00000467716 MAGI1Q96QZ7 1491 aaPredicted RBP30.84■■■□□ 2.53
C1GALT1-206ENST00000467716 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
C1GALT1-206ENST00000467716 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
C1GALT1-206ENST00000467716 SYNJ2O15056 1496 aa30.76■■■□□ 2.51
C1GALT1-206ENST00000467716 GAPVD1Q14C86 1478 aa30.73■■■□□ 2.51
C1GALT1-206ENST00000467716 PBRM1Q86U86 1689 aa30.66■■■□□ 2.5
C1GALT1-206ENST00000467716 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
C1GALT1-206ENST00000467716 ABCA5Q8WWZ7 1642 aa30.58■■■□□ 2.49
C1GALT1-206ENST00000467716 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
C1GALT1-206ENST00000467716 GRIN2AQ12879 1464 aa30.44■■■□□ 2.46
C1GALT1-206ENST00000467716 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
C1GALT1-206ENST00000467716 ADAMTS12P58397 1594 aa30.39■■■□□ 2.46
C1GALT1-206ENST00000467716 BIVM-ERCC5R4GMW8 1640 aa30.38■■■□□ 2.45
C1GALT1-206ENST00000467716 FHAD1B1AJZ9 1412 aa30.33■■■□□ 2.45
C1GALT1-206ENST00000467716 CEP170Q5SW79 1584 aa30.32■■■□□ 2.45
C1GALT1-206ENST00000467716 ERCC6L2Q5T890 1561 aa30.32■■■□□ 2.45
C1GALT1-206ENST00000467716 NUP160Q12769 1436 aa30.32■■■□□ 2.44
C1GALT1-206ENST00000467716 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
C1GALT1-206ENST00000467716 SHROOM2Q13796 1616 aa30.15■■■□□ 2.42
C1GALT1-206ENST00000467716 PRG4Q92954 1404 aaPredicted RBP30.11■■■□□ 2.41
C1GALT1-206ENST00000467716 AEBP2Q6ZN18 517 aaPredicted RBP30.1■■■□□ 2.41
C1GALT1-206ENST00000467716 JPH4Q96JJ6 628 aa30.07■■■□□ 2.4
C1GALT1-206ENST00000467716 RUSC2Q8N2Y8 1516 aa29.96■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms