RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 TROQ12816 1431 aaPredicted RBP23.56■■□□□ 1.36
RB1-202ENST00000467505 EFCAB2Q5VUJ9 269 aa23.55■■□□□ 1.36
RB1-202ENST00000467505 SCAPERQ9BY12 1400 aa23.55■■□□□ 1.36
RB1-202ENST00000467505 LRRIQ1Q96JM4 1722 aa23.52■■□□□ 1.36
RB1-202ENST00000467505 RIMS1Q86UR5 1692 aaKnown RBP23.51■■□□□ 1.35
RB1-202ENST00000467505 CCDC18Q5T9S5 1454 aa23.51■■□□□ 1.35
RB1-202ENST00000467505 ARHGAP5Q13017 1502 aa23.49■■□□□ 1.35
RB1-202ENST00000467505 CASKIN1Q8WXD9 1431 aa23.49■■□□□ 1.35
RB1-202ENST00000467505 YEATS2Q9ULM3 1422 aa23.49■■□□□ 1.35
RB1-202ENST00000467505 PCF11O94913 1555 aaKnown RBP23.48■■□□□ 1.35
RB1-202ENST00000467505 ZNF518AQ6AHZ1 1483 aa23.46■■□□□ 1.35
RB1-202ENST00000467505 ILDR1Q86SU0 546 aaPredicted RBP23.45■■□□□ 1.34
RB1-202ENST00000467505 ATP10AO60312 1499 aa23.43■■□□□ 1.34
RB1-202ENST00000467505 C9orf84Q5VXU9 1444 aa23.42■■□□□ 1.34
RB1-202ENST00000467505 FER1L4A9Z1Z3 1794 aa23.42■■□□□ 1.34
RB1-202ENST00000467505 FYCO1Q9BQS8 1478 aa23.42■■□□□ 1.34
RB1-202ENST00000467505 CDC42BPBQ9Y5S2 1711 aa23.42■■□□□ 1.34
RB1-202ENST00000467505 SIGLEC1Q9BZZ2 1709 aa23.41■■□□□ 1.34
RB1-202ENST00000467505 PREX2Q70Z35 1606 aa23.41■■□□□ 1.34
RB1-202ENST00000467505 KDM5CP41229 1560 aa23.39■■□□□ 1.33
RB1-202ENST00000467505 MLECQ14165 292 aa23.37■■□□□ 1.33
RB1-202ENST00000467505 MYT1LQ9UL68 1186 aa23.37■■□□□ 1.33
RB1-202ENST00000467505 LMTK3Q96Q04 1460 aa23.36■■□□□ 1.33
RB1-202ENST00000467505 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.33
RB1-202ENST00000467505 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
RB1-202ENST00000467505 CDC42BPAQ5VT25 1732 aa23.33■■□□□ 1.32
RB1-202ENST00000467505 ABCC1P33527 1531 aa23.33■■□□□ 1.32
RB1-202ENST00000467505 ITSN2Q9NZM3 1697 aa23.32■■□□□ 1.32
RB1-202ENST00000467505 PLPPR3Q6T4P5 718 aa23.31■■□□□ 1.32
RB1-202ENST00000467505 REREQ9P2R6 1566 aa23.31■■□□□ 1.32
RB1-202ENST00000467505 MLH3Q9UHC1 1453 aa23.3■■□□□ 1.32
RB1-202ENST00000467505 DIP2CQ9Y2E4 1556 aa23.29■■□□□ 1.32
RB1-202ENST00000467505 ABCA6Q8N139 1617 aa23.26■■□□□ 1.31
RB1-202ENST00000467505 TRAPPC8Q9Y2L5 1435 aa23.24■■□□□ 1.31
RB1-202ENST00000467505 PREX1Q8TCU6 1659 aa23.23■■□□□ 1.31
RB1-202ENST00000467505 AGLP35573 1532 aa23.22■■□□□ 1.31
RB1-202ENST00000467505 KIDINS220Q9ULH0 1771 aa23.2■■□□□ 1.3
RB1-202ENST00000467505 HSPA2P54652 639 aa23.2■■□□□ 1.3
RB1-202ENST00000467505 ZNF777Q9ULD5 760 aaPredicted RBP23.2■■□□□ 1.3
RB1-202ENST00000467505 SAMD9LQ8IVG5 1584 aa23.19■■□□□ 1.3
RB1-202ENST00000467505 GPATCH8Q9UKJ3 1502 aaKnown RBP23.19■■□□□ 1.3
RB1-202ENST00000467505 MTUS2Q5JR59 1369 aa23.19■■□□□ 1.3
RB1-202ENST00000467505 FBXO41Q8TF61 875 aa23.19■■□□□ 1.3
RB1-202ENST00000467505 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
RB1-202ENST00000467505 PLEKHH2Q8IVE3 1493 aa23.18■■□□□ 1.3
RB1-202ENST00000467505 SETD1BQ9UPS6 1966 aaKnown RBP23.18■■□□□ 1.3
RB1-202ENST00000467505 CCNB3Q8WWL7 1395 aa23.16■■□□□ 1.3
RB1-202ENST00000467505 SYCP2Q9BX26 1530 aa23.16■■□□□ 1.3
RB1-202ENST00000467505 CFDP1Q9UEE9 299 aaPredicted RBP23.14■■□□□ 1.29
RB1-202ENST00000467505 KIAA1107Q9UPP5 1409 aa23.14■■□□□ 1.29
RB1-202ENST00000467505 SPAG9O60271 1321 aaKnown RBP23.13■■□□□ 1.29
RB1-202ENST00000467505 CEBPAP49715 358 aaPredicted RBP23.13■■□□□ 1.29
RB1-202ENST00000467505 EHBP1L1Q8N3D4 1523 aa23.13■■□□□ 1.29
RB1-202ENST00000467505 C3P01024 1663 aa23.13■■□□□ 1.29
RB1-202ENST00000467505 UHRF1BP1Q6BDS2 1440 aa23.12■■□□□ 1.29
RB1-202ENST00000467505 CNTLNQ9NXG0 1405 aa23.12■■□□□ 1.29
RB1-202ENST00000467505 CEP162Q5TB80 1403 aa23.1■■□□□ 1.29
RB1-202ENST00000467505 ATP7AQ04656 1500 aa23.09■■□□□ 1.29
RB1-202ENST00000467505 HNRNPMP52272 730 aaKnown RBP eCLIP23.09■■□□□ 1.29
RB1-202ENST00000467505 INO80Q9ULG1 1556 aaPredicted RBP23.06■■□□□ 1.28
RB1-202ENST00000467505 DMRT2Q9Y5R5 561 aa23.06■■□□□ 1.28
RB1-202ENST00000467505 MROH2AA6NES4 1674 aa23.06■■□□□ 1.28
RB1-202ENST00000467505 SUPT6HQ7KZ85 1726 aaKnown RBP23.05■■□□□ 1.28
RB1-202ENST00000467505 TIAM1Q13009 1591 aa23.05■■□□□ 1.28
RB1-202ENST00000467505 A2MP01023 1474 aa23.02■■□□□ 1.28
RB1-202ENST00000467505 ADGBQ8N7X0 1667 aa23.02■■□□□ 1.28
RB1-202ENST00000467505 PLXNC1O60486 1568 aa23.01■■□□□ 1.27
RB1-202ENST00000467505 STRCQ7RTU9 1775 aa22.99■■□□□ 1.27
RB1-202ENST00000467505 NPATQ14207 1427 aa22.97■■□□□ 1.27
RB1-202ENST00000467505 CERKQ8TCT0 537 aa22.96■■□□□ 1.27
RB1-202ENST00000467505 CLTCQ00610 1675 aaKnown RBP22.95■■□□□ 1.26
RB1-202ENST00000467505 RTEL1-TNFRSF6BF6WH68 1400 aa22.94■■□□□ 1.26
RB1-202ENST00000467505 ZMYM3Q14202 1370 aa22.94■■□□□ 1.26
RB1-202ENST00000467505 NCOA2Q15596 1464 aa22.93■■□□□ 1.26
RB1-202ENST00000467505 MBD5Q9P267 1494 aa22.93■■□□□ 1.26
RB1-202ENST00000467505 ZNF644Q9H582 1327 aaPredicted RBP22.93■■□□□ 1.26
RB1-202ENST00000467505 PPP6R1Q9UPN7 881 aa22.93■■□□□ 1.26
RB1-202ENST00000467505 RSPH4AQ5TD94 716 aa22.91■■□□□ 1.26
RB1-202ENST00000467505 PTPRTO14522 1441 aa22.91■■□□□ 1.26
RB1-202ENST00000467505 GGT6Q6P531 493 aa22.9■■□□□ 1.26
RB1-202ENST00000467505 CCDC141Q6ZP82 1450 aa22.9■■□□□ 1.26
RB1-202ENST00000467505 VPS8Q8N3P4 1428 aa22.89■■□□□ 1.25
RB1-202ENST00000467505 CAMSAP2Q08AD1 1489 aa22.88■■□□□ 1.25
RB1-202ENST00000467505 NCOA1Q15788 1441 aa22.85■■□□□ 1.25
RB1-202ENST00000467505 DHX29Q7Z478 1369 aaKnown RBP22.85■■□□□ 1.25
RB1-202ENST00000467505 ZNF142P52746 1687 aaPredicted RBP22.84■■□□□ 1.25
RB1-202ENST00000467505 MYO3AQ8NEV4 1616 aa22.84■■□□□ 1.25
RB1-202ENST00000467505 CAMSAP1Q5T5Y3 1602 aa22.83■■□□□ 1.25
RB1-202ENST00000467505 LRRC9Q6ZRR7 1453 aa22.83■■□□□ 1.25
RB1-202ENST00000467505 ARHGEF5Q12774 1597 aa22.83■■□□□ 1.25
RB1-202ENST00000467505 FAM135AQ9P2D6 1515 aa22.82■■□□□ 1.24
RB1-202ENST00000467505 PTPRKQ15262 1439 aa22.82■■□□□ 1.24
RB1-202ENST00000467505 MAP3K1Q13233 1512 aa22.81■■□□□ 1.24
RB1-202ENST00000467505 TSPY4P0CV99 314 aa22.8■■□□□ 1.24
RB1-202ENST00000467505 TSPY10P0CW01 314 aa22.8■■□□□ 1.24
RB1-202ENST00000467505 CEP170BQ9Y4F5 1589 aaPredicted RBP22.8■■□□□ 1.24
RB1-202ENST00000467505 LOC105371045A0A1W2PR82 267 aa22.79■■□□□ 1.24
RB1-202ENST00000467505 PLA2R1Q13018 1463 aa22.78■■□□□ 1.24
RB1-202ENST00000467505 KIF3BO15066 747 aa22.77■■□□□ 1.24
RB1-202ENST00000467505 KDM5DQ9BY66 1539 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms