RNA–Protein interactions for RNA: ENST00000467505.5

RB1-202, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 1 (best)

Gene RB1, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-202ENST00000467505 NISCHQ9Y2I1 1504 aa35.93■■■■□ 3.34
RB1-202ENST00000467505 CCDC180Q9P1Z9 1646 aa32.32■■■□□ 2.76
RB1-202ENST00000467505 ABCC9O60706 1549 aa32.11■■■□□ 2.73
RB1-202ENST00000467505 RB1CC1Q8TDY2 1594 aa30.71■■■□□ 2.51
RB1-202ENST00000467505 NACADO15069 1562 aa30.51■■■□□ 2.47
RB1-202ENST00000467505 DCAF8L2P0C7V8 631 aa30.28■■■□□ 2.44
RB1-202ENST00000467505 MYO15BQ96JP2 1530 aa30.12■■■□□ 2.41
RB1-202ENST00000467505 UNC13AQ9UPW8 1703 aa29.98■■■□□ 2.39
RB1-202ENST00000467505 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
RB1-202ENST00000467505 PABPN1Q86U42 306 aaKnown RBP eCLIP29.86■■■□□ 2.37
RB1-202ENST00000467505 ZCCHC6Q5VYS8 1495 aaKnown RBP29.79■■■□□ 2.36
RB1-202ENST00000467505 DCAF1Q9Y4B6 1507 aa29.74■■■□□ 2.35
RB1-202ENST00000467505 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.35
RB1-202ENST00000467505 SHROOM4Q9ULL8 1493 aa29.47■■■□□ 2.31
RB1-202ENST00000467505 SCRIBQ14160 1630 aa29.35■■■□□ 2.29
RB1-202ENST00000467505 CC2D2AQ9P2K1 1620 aa29.05■■■□□ 2.24
RB1-202ENST00000467505 EIF4G1Q04637 1599 aaKnown RBP29.02■■■□□ 2.24
RB1-202ENST00000467505 CECR2Q9BXF3 1484 aa28.96■■■□□ 2.23
RB1-202ENST00000467505 NCAPD3P42695 1498 aa28.11■■■□□ 2.09
RB1-202ENST00000467505 SMARCA4P51532 1647 aa28.03■■■□□ 2.08
RB1-202ENST00000467505 SMARCA2P51531 1590 aa28.02■■■□□ 2.08
RB1-202ENST00000467505 ATAD2BQ9ULI0 1458 aa28.01■■■□□ 2.07
RB1-202ENST00000467505 HMGXB3Q12766 1538 aa27.95■■■□□ 2.06
RB1-202ENST00000467505 BAZ1AQ9NRL2 1556 aaPredicted RBP27.94■■■□□ 2.06
RB1-202ENST00000467505 ERCC6Q03468 1493 aa27.81■■■□□ 2.04
RB1-202ENST00000467505 BAZ1BQ9UIG0 1483 aaKnown RBP27.79■■■□□ 2.04
RB1-202ENST00000467505 PEG3Q9GZU2 1588 aa27.77■■■□□ 2.04
RB1-202ENST00000467505 CUX2O14529 1486 aa27.75■■■□□ 2.03
RB1-202ENST00000467505 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
RB1-202ENST00000467505 DNAJC5Q9H3Z4 198 aa27.58■■■□□ 2.01
RB1-202ENST00000467505 NESP48681 1621 aa27.58■■■□□ 2.01
RB1-202ENST00000467505 LAMC3Q9Y6N6 1575 aa27.53■■■□□ 2
RB1-202ENST00000467505 THOC2Q8NI27 1593 aaKnown RBP27.35■■□□□ 1.97
RB1-202ENST00000467505 PDS5BQ9NTI5 1447 aa27.35■■□□□ 1.97
RB1-202ENST00000467505 WIZO95785 1651 aa27.34■■□□□ 1.97
RB1-202ENST00000467505 KIF21AQ7Z4S6 1674 aa27.31■■□□□ 1.96
RB1-202ENST00000467505 CADPSQ9ULU8 1353 aa27.25■■□□□ 1.95
RB1-202ENST00000467505 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
RB1-202ENST00000467505 MRC2Q9UBG0 1479 aa27.08■■□□□ 1.93
RB1-202ENST00000467505 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
RB1-202ENST00000467505 WDR62O43379 1518 aa27.01■■□□□ 1.91
RB1-202ENST00000467505 CEP164Q9UPV0 1460 aa27.01■■□□□ 1.91
RB1-202ENST00000467505 CFTRP13569 1480 aa26.95■■□□□ 1.91
RB1-202ENST00000467505 FANCD2Q9BXW9 1451 aa26.95■■□□□ 1.91
RB1-202ENST00000467505 PRDM2Q13029 1718 aa26.81■■□□□ 1.88
RB1-202ENST00000467505 URB2Q14146 1524 aaKnown RBP26.69■■□□□ 1.86
RB1-202ENST00000467505 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
RB1-202ENST00000467505 ABCC8Q09428 1581 aa26.49■■□□□ 1.83
RB1-202ENST00000467505 IFT140Q96RY7 1462 aa26.47■■□□□ 1.83
RB1-202ENST00000467505 OSCARQ8IYS5 282 aa26.46■■□□□ 1.83
RB1-202ENST00000467505 TOPBP1Q92547 1522 aa26.44■■□□□ 1.82
RB1-202ENST00000467505 DNMBPQ6XZF7 1577 aa26.39■■□□□ 1.82
RB1-202ENST00000467505 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
RB1-202ENST00000467505 ZNF608Q9ULD9 1512 aaPredicted RBP26.32■■□□□ 1.8
RB1-202ENST00000467505 EIF4G3O43432 1585 aaKnown RBP26.26■■□□□ 1.79
RB1-202ENST00000467505 TARBP1Q13395 1621 aaKnown RBP26.2■■□□□ 1.78
RB1-202ENST00000467505 POLA1P09884 1462 aaPredicted RBP26.17■■□□□ 1.78
RB1-202ENST00000467505 AQRO60306 1485 aaKnown RBP eCLIP26.11■■□□□ 1.77
RB1-202ENST00000467505 RIMBP3CA6NJZ7 1639 aa26.1■■□□□ 1.77
RB1-202ENST00000467505 RIMBP3BA6NNM3 1639 aa26.1■■□□□ 1.77
RB1-202ENST00000467505 RIMBP3Q9UFD9 1639 aa26.1■■□□□ 1.77
RB1-202ENST00000467505 CHD1O14646 1710 aa26.07■■□□□ 1.76
RB1-202ENST00000467505 SOGA1O94964 1423 aa26.06■■□□□ 1.76
RB1-202ENST00000467505 WDR97A6NE52 1622 aa26.06■■□□□ 1.76
RB1-202ENST00000467505 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
RB1-202ENST00000467505 FGD5Q6ZNL6 1462 aa26.02■■□□□ 1.76
RB1-202ENST00000467505 ARHGEF11O15085 1522 aa26.01■■□□□ 1.75
RB1-202ENST00000467505 CUX1P39880 1505 aa25.98■■□□□ 1.75
RB1-202ENST00000467505 FBLN2P98095 1184 aa25.97■■□□□ 1.75
RB1-202ENST00000467505 TDRD9Q8NDG6 1382 aaKnown RBP25.95■■□□□ 1.75
RB1-202ENST00000467505 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
RB1-202ENST00000467505 SNAPC4Q5SXM2 1469 aa25.88■■□□□ 1.73
RB1-202ENST00000467505 MAGI1Q96QZ7 1491 aaPredicted RBP25.87■■□□□ 1.73
RB1-202ENST00000467505 GRIN2BQ13224 1484 aa25.85■■□□□ 1.73
RB1-202ENST00000467505 CHMP7Q8WUX9 453 aaPredicted RBP25.82■■□□□ 1.72
RB1-202ENST00000467505 SYNJ1O43426 1573 aa25.8■■□□□ 1.72
RB1-202ENST00000467505 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
RB1-202ENST00000467505 PBRM1Q86U86 1689 aa25.79■■□□□ 1.72
RB1-202ENST00000467505 SYNJ2O15056 1496 aa25.77■■□□□ 1.72
RB1-202ENST00000467505 GAPVD1Q14C86 1478 aa25.76■■□□□ 1.71
RB1-202ENST00000467505 CLASP1Q7Z460 1538 aa25.74■■□□□ 1.71
RB1-202ENST00000467505 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
RB1-202ENST00000467505 ARAP1Q96P48 1450 aa25.73■■□□□ 1.71
RB1-202ENST00000467505 ABCA5Q8WWZ7 1642 aa25.7■■□□□ 1.71
RB1-202ENST00000467505 WRNQ14191 1432 aaPredicted RBP eCLIP25.67■■□□□ 1.7
RB1-202ENST00000467505 BIVM-ERCC5R4GMW8 1640 aa25.65■■□□□ 1.7
RB1-202ENST00000467505 TOP2BQ02880 1626 aa25.64■■□□□ 1.7
RB1-202ENST00000467505 TRHP20396 242 aaPredicted RBP25.53■■□□□ 1.68
RB1-202ENST00000467505 ADAMTS12P58397 1594 aa25.52■■□□□ 1.68
RB1-202ENST00000467505 GRIN2AQ12879 1464 aa25.51■■□□□ 1.67
RB1-202ENST00000467505 ERICH3Q5RHP9 1530 aa25.46■■□□□ 1.67
RB1-202ENST00000467505 FHAD1B1AJZ9 1412 aa25.45■■□□□ 1.66
RB1-202ENST00000467505 NUP160Q12769 1436 aa25.41■■□□□ 1.66
RB1-202ENST00000467505 CEP170Q5SW79 1584 aa25.39■■□□□ 1.65
RB1-202ENST00000467505 SHROOM2Q13796 1616 aa25.31■■□□□ 1.64
RB1-202ENST00000467505 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
RB1-202ENST00000467505 KIF27Q86VH2 1401 aa25.16■■□□□ 1.62
RB1-202ENST00000467505 PRG4Q92954 1404 aaPredicted RBP25.15■■□□□ 1.62
RB1-202ENST00000467505 JPH4Q96JJ6 628 aa25.15■■□□□ 1.62
RB1-202ENST00000467505 RUSC2Q8N2Y8 1516 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms