RNA–Protein interactions for RNA: ENST00000466892.5

HLA-C-205, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-205ENST00000466892 MIA2Q96PC5 1412 aa25.26■■□□□ 1.63
HLA-C-205ENST00000466892 ITSN2Q9NZM3 1697 aa25.26■■□□□ 1.63
HLA-C-205ENST00000466892 CFDP1Q9UEE9 299 aaPredicted RBP25.25■■□□□ 1.63
HLA-C-205ENST00000466892 ARHGAP5Q13017 1502 aa25.25■■□□□ 1.63
HLA-C-205ENST00000466892 PPRC1Q5VV67 1664 aaKnown RBP25.25■■□□□ 1.63
HLA-C-205ENST00000466892 CDC42BPAQ5VT25 1732 aa25.22■■□□□ 1.63
HLA-C-205ENST00000466892 AKNAQ7Z591 1439 aa25.2■■□□□ 1.62
HLA-C-205ENST00000466892 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
HLA-C-205ENST00000466892 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
HLA-C-205ENST00000466892 KIAA1107Q9UPP5 1409 aa25.17■■□□□ 1.62
HLA-C-205ENST00000466892 FGD6Q6ZV73 1430 aa25.15■■□□□ 1.62
HLA-C-205ENST00000466892 TSPOAP1O95153 1857 aa25.14■■□□□ 1.61
HLA-C-205ENST00000466892 ADGRL1O94910 1474 aa25.14■■□□□ 1.61
HLA-C-205ENST00000466892 ABCC1P33527 1531 aa25.12■■□□□ 1.61
HLA-C-205ENST00000466892 PPARGC1BQ86YN6 1023 aaKnown RBP25.11■■□□□ 1.61
HLA-C-205ENST00000466892 SAMD9LQ8IVG5 1584 aa25.1■■□□□ 1.61
HLA-C-205ENST00000466892 DENND4BO75064 1496 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-205ENST00000466892 TCOF1Q13428 1488 aaKnown RBP25.09■■□□□ 1.61
HLA-C-205ENST00000466892 ZNF777Q9ULD5 760 aaPredicted RBP25.09■■□□□ 1.61
HLA-C-205ENST00000466892 SCAPERQ9BY12 1400 aa25.09■■□□□ 1.61
HLA-C-205ENST00000466892 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
HLA-C-205ENST00000466892 RSPH4AQ5TD94 716 aa25.08■■□□□ 1.61
HLA-C-205ENST00000466892 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.07■■□□□ 1.6
HLA-C-205ENST00000466892 POGZQ7Z3K3 1410 aa25.05■■□□□ 1.6
HLA-C-205ENST00000466892 RRBP1Q9P2E9 1410 aaKnown RBP25.05■■□□□ 1.6
HLA-C-205ENST00000466892 ZNF518AQ6AHZ1 1483 aa25.05■■□□□ 1.6
HLA-C-205ENST00000466892 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
HLA-C-205ENST00000466892 KDM6BO15054 1643 aa25.04■■□□□ 1.6
HLA-C-205ENST00000466892 MBD5Q9P267 1494 aa25.03■■□□□ 1.6
HLA-C-205ENST00000466892 ZNF644Q9H582 1327 aaPredicted RBP25.03■■□□□ 1.6
HLA-C-205ENST00000466892 COL17A1Q9UMD9 1497 aaPredicted RBP25.02■■□□□ 1.6
HLA-C-205ENST00000466892 SYCP2Q9BX26 1530 aa25.02■■□□□ 1.6
HLA-C-205ENST00000466892 ARHGEF12Q9NZN5 1544 aa25.02■■□□□ 1.6
HLA-C-205ENST00000466892 ARHGEF5Q12774 1597 aa25.01■■□□□ 1.59
HLA-C-205ENST00000466892 CCDC141Q6ZP82 1450 aa24.98■■□□□ 1.59
HLA-C-205ENST00000466892 KDM5CP41229 1560 aa24.97■■□□□ 1.59
HLA-C-205ENST00000466892 HNRNPMP52272 730 aaKnown RBP eCLIP24.97■■□□□ 1.59
HLA-C-205ENST00000466892 ZMYM4Q5VZL5 1548 aa24.96■■□□□ 1.59
HLA-C-205ENST00000466892 MAGI2Q86UL8 1455 aa24.96■■□□□ 1.59
HLA-C-205ENST00000466892 TRAPPC8Q9Y2L5 1435 aa24.96■■□□□ 1.59
HLA-C-205ENST00000466892 RAPGEF3O95398 923 aa24.96■■□□□ 1.59
HLA-C-205ENST00000466892 FRMPD1Q5SYB0 1578 aa24.95■■□□□ 1.58
HLA-C-205ENST00000466892 RICTORQ6R327 1708 aa24.94■■□□□ 1.58
HLA-C-205ENST00000466892 FAM50AQ14320 339 aaKnown RBP24.93■■□□□ 1.58
HLA-C-205ENST00000466892 AFAP1Q8N556 730 aa24.93■■□□□ 1.58
HLA-C-205ENST00000466892 MLH3Q9UHC1 1453 aa24.93■■□□□ 1.58
HLA-C-205ENST00000466892 SHANK2Q9UPX8 1470 aa24.92■■□□□ 1.58
HLA-C-205ENST00000466892 RTEL1-TNFRSF6BF6WH68 1400 aa24.92■■□□□ 1.58
HLA-C-205ENST00000466892 TSPY4P0CV99 314 aa24.91■■□□□ 1.58
HLA-C-205ENST00000466892 TSPY10P0CW01 314 aa24.91■■□□□ 1.58
HLA-C-205ENST00000466892 DNMT1P26358 1616 aaKnown RBP24.9■■□□□ 1.58
HLA-C-205ENST00000466892 DAPK1P53355 1430 aa24.9■■□□□ 1.58
HLA-C-205ENST00000466892 SPAG9O60271 1321 aaKnown RBP24.88■■□□□ 1.57
HLA-C-205ENST00000466892 ABCC5O15440 1437 aa24.88■■□□□ 1.57
HLA-C-205ENST00000466892 HECW2Q9P2P5 1572 aa24.87■■□□□ 1.57
HLA-C-205ENST00000466892 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
HLA-C-205ENST00000466892 C9orf84Q5VXU9 1444 aa24.84■■□□□ 1.57
HLA-C-205ENST00000466892 INO80Q9ULG1 1556 aaPredicted RBP24.84■■□□□ 1.57
HLA-C-205ENST00000466892 ZFYVE16Q7Z3T8 1539 aa24.83■■□□□ 1.57
HLA-C-205ENST00000466892 ATP7AQ04656 1500 aa24.82■■□□□ 1.56
HLA-C-205ENST00000466892 ARHGEF40Q8TER5 1519 aa24.81■■□□□ 1.56
HLA-C-205ENST00000466892 CROCC2H7BZ55 1655 aa24.8■■□□□ 1.56
HLA-C-205ENST00000466892 ADGRL2O95490 1459 aa24.78■■□□□ 1.56
HLA-C-205ENST00000466892 ROCK1Q13464 1354 aa24.78■■□□□ 1.56
HLA-C-205ENST00000466892 ANKRD30AQ9BXX3 1397 aa24.77■■□□□ 1.56
HLA-C-205ENST00000466892 PLXNC1O60486 1568 aa24.76■■□□□ 1.55
HLA-C-205ENST00000466892 KIDINS220Q9ULH0 1771 aa24.76■■□□□ 1.55
HLA-C-205ENST00000466892 MYT1LQ9UL68 1186 aa24.76■■□□□ 1.55
HLA-C-205ENST00000466892 YEATS2Q9ULM3 1422 aa24.76■■□□□ 1.55
HLA-C-205ENST00000466892 ATP10AO60312 1499 aa24.76■■□□□ 1.55
HLA-C-205ENST00000466892 REREQ9P2R6 1566 aa24.75■■□□□ 1.55
HLA-C-205ENST00000466892 DIP2CQ9Y2E4 1556 aa24.73■■□□□ 1.55
HLA-C-205ENST00000466892 PTPRKQ15262 1439 aa24.73■■□□□ 1.55
HLA-C-205ENST00000466892 NCOA1Q15788 1441 aa24.73■■□□□ 1.55
HLA-C-205ENST00000466892 ABCA6Q8N139 1617 aa24.71■■□□□ 1.55
HLA-C-205ENST00000466892 A2MP01023 1474 aa24.69■■□□□ 1.54
HLA-C-205ENST00000466892 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
HLA-C-205ENST00000466892 KIF15Q9NS87 1388 aa24.68■■□□□ 1.54
HLA-C-205ENST00000466892 DUOX2Q9NRD8 1548 aa24.67■■□□□ 1.54
HLA-C-205ENST00000466892 ADGBQ8N7X0 1667 aa24.67■■□□□ 1.54
HLA-C-205ENST00000466892 ITGAEP38570 1179 aa24.67■■□□□ 1.54
HLA-C-205ENST00000466892 CHIC2Q9UKJ5 165 aa24.67■■□□□ 1.54
HLA-C-205ENST00000466892 AGLP35573 1532 aa24.66■■□□□ 1.54
HLA-C-205ENST00000466892 TRIM26Q12899 539 aaPredicted RBP24.65■■□□□ 1.54
HLA-C-205ENST00000466892 ERBINQ96RT1 1412 aa24.65■■□□□ 1.54
HLA-C-205ENST00000466892 HFM1A2PYH4 1435 aa24.62■■□□□ 1.53
HLA-C-205ENST00000466892 RRP7BPQ9NSQ0 103 aa24.62■■□□□ 1.53
HLA-C-205ENST00000466892 ANKRD50Q9ULJ7 1429 aa24.58■■□□□ 1.53
HLA-C-205ENST00000466892 EIF2AK4Q9P2K8 1649 aaKnown RBP24.57■■□□□ 1.52
HLA-C-205ENST00000466892 BCORL1Q5H9F3 1711 aa24.55■■□□□ 1.52
HLA-C-205ENST00000466892 NAIPQ13075 1403 aa24.55■■□□□ 1.52
HLA-C-205ENST00000466892 ACIN1Q9UKV3 1341 aaKnown RBP24.55■■□□□ 1.52
HLA-C-205ENST00000466892 PPP6R1Q9UPN7 881 aa24.53■■□□□ 1.52
HLA-C-205ENST00000466892 ARID4BQ4LE39 1312 aaPredicted RBP24.52■■□□□ 1.52
HLA-C-205ENST00000466892 FAM135AQ9P2D6 1515 aa24.5■■□□□ 1.51
HLA-C-205ENST00000466892 GCC2Q8IWJ2 1684 aa24.5■■□□□ 1.51
HLA-C-205ENST00000466892 KIF3BO15066 747 aa24.49■■□□□ 1.51
HLA-C-205ENST00000466892 SIGLEC1Q9BZZ2 1709 aa24.47■■□□□ 1.51
HLA-C-205ENST00000466892 RNF17Q9BXT8 1623 aaKnown RBP24.46■■□□□ 1.51
HLA-C-205ENST00000466892 SETD5Q9C0A6 1442 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms