RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 LRRC9Q6ZRR7 1453 aa36.69■■■■□ 3.46
SUMO3-205ENST00000466861 DENND4BO75064 1496 aaPredicted RBP36.69■■■■□ 3.46
SUMO3-205ENST00000466861 SUPT6HQ7KZ85 1726 aaKnown RBP36.68■■■■□ 3.46
SUMO3-205ENST00000466861 APLP2Q06481 763 aa36.67■■■■□ 3.46
SUMO3-205ENST00000466861 GPATCH8Q9UKJ3 1502 aaKnown RBP36.66■■■■□ 3.46
SUMO3-205ENST00000466861 ADGRL1O94910 1474 aa36.66■■■■□ 3.46
SUMO3-205ENST00000466861 CCNB3Q8WWL7 1395 aa36.65■■■■□ 3.46
SUMO3-205ENST00000466861 RICTORQ6R327 1708 aa36.62■■■■□ 3.45
SUMO3-205ENST00000466861 SCAPERQ9BY12 1400 aa36.6■■■■□ 3.45
SUMO3-205ENST00000466861 FRMPD1Q5SYB0 1578 aa36.6■■■■□ 3.45
SUMO3-205ENST00000466861 ITSN2Q9NZM3 1697 aa36.59■■■■□ 3.45
SUMO3-205ENST00000466861 NCOA2Q15596 1464 aa36.58■■■■□ 3.45
SUMO3-205ENST00000466861 RAPGEF3O95398 923 aa36.58■■■■□ 3.45
SUMO3-205ENST00000466861 POGZQ7Z3K3 1410 aa36.54■■■■□ 3.44
SUMO3-205ENST00000466861 ZMYM4Q5VZL5 1548 aa36.54■■■■□ 3.44
SUMO3-205ENST00000466861 CFDP1Q9UEE9 299 aaPredicted RBP36.53■■■■□ 3.44
SUMO3-205ENST00000466861 KANK4Q5T7N3 995 aaPredicted RBP36.52■■■■□ 3.44
SUMO3-205ENST00000466861 ABCC1P33527 1531 aa36.52■■■■□ 3.44
SUMO3-205ENST00000466861 PLEKHH2Q8IVE3 1493 aa36.5■■■■□ 3.43
SUMO3-205ENST00000466861 MAGI2Q86UL8 1455 aa36.5■■■■□ 3.43
SUMO3-205ENST00000466861 ZNF518AQ6AHZ1 1483 aa36.49■■■■□ 3.43
SUMO3-205ENST00000466861 SAMD9LQ8IVG5 1584 aa36.46■■■■□ 3.43
SUMO3-205ENST00000466861 KIAA1107Q9UPP5 1409 aa36.46■■■■□ 3.43
SUMO3-205ENST00000466861 KDM5CP41229 1560 aa36.43■■■■□ 3.42
SUMO3-205ENST00000466861 ARHGEF12Q9NZN5 1544 aa36.4■■■■□ 3.42
SUMO3-205ENST00000466861 ZNF777Q9ULD5 760 aaPredicted RBP36.4■■■■□ 3.42
SUMO3-205ENST00000466861 ARHGEF40Q8TER5 1519 aa36.39■■■■□ 3.42
SUMO3-205ENST00000466861 ZFYVE16Q7Z3T8 1539 aa36.35■■■■□ 3.41
SUMO3-205ENST00000466861 TRAPPC8Q9Y2L5 1435 aa36.34■■■■□ 3.41
SUMO3-205ENST00000466861 SYCP2Q9BX26 1530 aa36.34■■■■□ 3.41
SUMO3-205ENST00000466861 MYOM3Q5VTT5 1437 aa36.34■■■■□ 3.41
SUMO3-205ENST00000466861 MIA2Q96PC5 1412 aa36.34■■■■□ 3.41
SUMO3-205ENST00000466861 MLH3Q9UHC1 1453 aa36.33■■■■□ 3.41
SUMO3-205ENST00000466861 AFAP1Q8N556 730 aa36.33■■■■□ 3.41
SUMO3-205ENST00000466861 HECW2Q9P2P5 1572 aa36.31■■■■□ 3.4
SUMO3-205ENST00000466861 HNRNPMP52272 730 aaKnown RBP eCLIP36.27■■■■□ 3.4
SUMO3-205ENST00000466861 RSPH4AQ5TD94 716 aa36.27■■■■□ 3.4
SUMO3-205ENST00000466861 CAMSAP2Q08AD1 1489 aa36.26■■■■□ 3.4
SUMO3-205ENST00000466861 YEATS2Q9ULM3 1422 aa36.25■■■■□ 3.39
SUMO3-205ENST00000466861 MBD5Q9P267 1494 aa36.25■■■■□ 3.39
SUMO3-205ENST00000466861 ZNF644Q9H582 1327 aaPredicted RBP36.25■■■■□ 3.39
SUMO3-205ENST00000466861 ATP10AO60312 1499 aa36.22■■■■□ 3.39
SUMO3-205ENST00000466861 KIDINS220Q9ULH0 1771 aa36.18■■■■□ 3.38
SUMO3-205ENST00000466861 ARHGEF5Q12774 1597 aa36.18■■■■□ 3.38
SUMO3-205ENST00000466861 SPAG9O60271 1321 aaKnown RBP36.17■■■■□ 3.38
SUMO3-205ENST00000466861 C9orf84Q5VXU9 1444 aa36.17■■■■□ 3.38
SUMO3-205ENST00000466861 REREQ9P2R6 1566 aa36.15■■■■□ 3.38
SUMO3-205ENST00000466861 CCDC141Q6ZP82 1450 aa36.15■■■■□ 3.38
SUMO3-205ENST00000466861 DIP2CQ9Y2E4 1556 aa36.15■■■■□ 3.38
SUMO3-205ENST00000466861 MYT1LQ9UL68 1186 aa36.14■■■■□ 3.38
SUMO3-205ENST00000466861 KDM4FA0A1W2PPD8 638 aa36.13■■■■□ 3.37
SUMO3-205ENST00000466861 RTEL1-TNFRSF6BF6WH68 1400 aa36.13■■■■□ 3.37
SUMO3-205ENST00000466861 INO80Q9ULG1 1556 aaPredicted RBP36.12■■■■□ 3.37
SUMO3-205ENST00000466861 FGD6Q6ZV73 1430 aa36.12■■■■□ 3.37
SUMO3-205ENST00000466861 ATP7AQ04656 1500 aa36.11■■■■□ 3.37
SUMO3-205ENST00000466861 ABCA6Q8N139 1617 aa36.11■■■■□ 3.37
SUMO3-205ENST00000466861 PTPN23Q9H3S7 1636 aa36.08■■■■□ 3.37
SUMO3-205ENST00000466861 TCOF1Q13428 1488 aaKnown RBP36.08■■■■□ 3.37
SUMO3-205ENST00000466861 ARID4BQ4LE39 1312 aaPredicted RBP36.06■■■■□ 3.36
SUMO3-205ENST00000466861 BCORL1Q5H9F3 1711 aa36.05■■■■□ 3.36
SUMO3-205ENST00000466861 AGLP35573 1532 aa36.03■■■■□ 3.36
SUMO3-205ENST00000466861 TSPY4P0CV99 314 aa36.02■■■■□ 3.36
SUMO3-205ENST00000466861 TSPY10P0CW01 314 aa36.02■■■■□ 3.36
SUMO3-205ENST00000466861 ADAMTSL3P82987 1691 aa36.01■■■■□ 3.36
SUMO3-205ENST00000466861 SIGLEC1Q9BZZ2 1709 aa36■■■■□ 3.35
SUMO3-205ENST00000466861 MAST1Q9Y2H9 1570 aa35.99■■■■□ 3.35
SUMO3-205ENST00000466861 ADGBQ8N7X0 1667 aa35.98■■■■□ 3.35
SUMO3-205ENST00000466861 AEBP2Q6ZN18 517 aaPredicted RBP35.96■■■■□ 3.35
SUMO3-205ENST00000466861 A2MP01023 1474 aa35.93■■■■□ 3.34
SUMO3-205ENST00000466861 PLXNC1O60486 1568 aa35.92■■■■□ 3.34
SUMO3-205ENST00000466861 SHANK2Q9UPX8 1470 aa35.92■■■■□ 3.34
SUMO3-205ENST00000466861 DNMT1P26358 1616 aaKnown RBP35.91■■■■□ 3.34
SUMO3-205ENST00000466861 ABCC5O15440 1437 aa35.89■■■■□ 3.34
SUMO3-205ENST00000466861 CROCC2H7BZ55 1655 aa35.88■■■■□ 3.33
SUMO3-205ENST00000466861 DAPK1P53355 1430 aa35.86■■■■□ 3.33
SUMO3-205ENST00000466861 DHX29Q7Z478 1369 aaKnown RBP35.85■■■■□ 3.33
SUMO3-205ENST00000466861 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.84■■■■□ 3.332e-6■■■■■ 39.8
SUMO3-205ENST00000466861 MADDQ8WXG6 1647 aa35.83■■■■□ 3.33
SUMO3-205ENST00000466861 PPARGC1BQ86YN6 1023 aaKnown RBP35.81■■■■□ 3.32
SUMO3-205ENST00000466861 FAM50AQ14320 339 aaKnown RBP35.79■■■■□ 3.32
SUMO3-205ENST00000466861 FER1L4A9Z1Z3 1794 aa35.79■■■■□ 3.32
SUMO3-205ENST00000466861 MLECQ14165 292 aa35.77■■■■□ 3.32
SUMO3-205ENST00000466861 PTPRMP28827 1452 aa35.76■■■■□ 3.32
SUMO3-205ENST00000466861 RIMS1Q86UR5 1692 aaKnown RBP35.74■■■■□ 3.31
SUMO3-205ENST00000466861 PPP6R1Q9UPN7 881 aa35.73■■■■□ 3.31
SUMO3-205ENST00000466861 RRBP1Q9P2E9 1410 aaKnown RBP35.72■■■■□ 3.31
SUMO3-205ENST00000466861 DUOX2Q9NRD8 1548 aa35.71■■■■□ 3.31
SUMO3-205ENST00000466861 ADGRL2O95490 1459 aa35.69■■■■□ 3.3
SUMO3-205ENST00000466861 CNTLNQ9NXG0 1405 aa35.69■■■■□ 3.3
SUMO3-205ENST00000466861 ANKRD30AQ9BXX3 1397 aa35.69■■■■□ 3.3
SUMO3-205ENST00000466861 EIF2AK4Q9P2K8 1649 aaKnown RBP35.67■■■■□ 3.3
SUMO3-205ENST00000466861 KIF15Q9NS87 1388 aa35.66■■■■□ 3.3
SUMO3-205ENST00000466861 NCOA1Q15788 1441 aa35.65■■■■□ 3.3
SUMO3-205ENST00000466861 ESF1Q9H501 851 aaKnown RBP35.64■■■■□ 3.3
SUMO3-205ENST00000466861 FAM135AQ9P2D6 1515 aa35.63■■■■□ 3.29
SUMO3-205ENST00000466861 KIF3BO15066 747 aa35.62■■■■□ 3.29
SUMO3-205ENST00000466861 ERBINQ96RT1 1412 aa35.61■■■■□ 3.29
SUMO3-205ENST00000466861 MROH2AA6NES4 1674 aa35.59■■■■□ 3.29
SUMO3-205ENST00000466861 GGT6Q6P531 493 aa35.59■■■■□ 3.29
SUMO3-205ENST00000466861 RRP7BPQ9NSQ0 103 aa35.58■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms