RNA–Protein interactions for RNA: ENST00000466829.5

COL16A1-207, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 254 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-207ENST00000466829 MYO5CQ9NQX4 1742 aa25.51■■□□□ 1.67
COL16A1-207ENST00000466829 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
COL16A1-207ENST00000466829 RICTORQ6R327 1708 aa25.46■■□□□ 1.67
COL16A1-207ENST00000466829 MTUS2Q5JR59 1369 aa25.44■■□□□ 1.66
COL16A1-207ENST00000466829 ZFYVE16Q7Z3T8 1539 aa25.43■■□□□ 1.66
COL16A1-207ENST00000466829 ZNF777Q9ULD5 760 aaPredicted RBP25.43■■□□□ 1.66
COL16A1-207ENST00000466829 ARHGEF40Q8TER5 1519 aa25.42■■□□□ 1.66
COL16A1-207ENST00000466829 MAGI2Q86UL8 1455 aa25.42■■□□□ 1.66
COL16A1-207ENST00000466829 AFAP1Q8N556 730 aa25.42■■□□□ 1.66
COL16A1-207ENST00000466829 YEATS2Q9ULM3 1422 aa25.42■■□□□ 1.66
COL16A1-207ENST00000466829 ZMYM4Q5VZL5 1548 aa25.41■■□□□ 1.66
COL16A1-207ENST00000466829 MLECQ14165 292 aa25.38■■□□□ 1.65
COL16A1-207ENST00000466829 ZNF518AQ6AHZ1 1483 aa25.38■■□□□ 1.65
COL16A1-207ENST00000466829 CCNB3Q8WWL7 1395 aa25.35■■□□□ 1.65
COL16A1-207ENST00000466829 CFDP1Q9UEE9 299 aaPredicted RBP25.34■■□□□ 1.65
COL16A1-207ENST00000466829 PREX2Q70Z35 1606 aa25.34■■□□□ 1.65
COL16A1-207ENST00000466829 PLPPR3Q6T4P5 718 aa25.33■■□□□ 1.65
COL16A1-207ENST00000466829 CDC42BPBQ9Y5S2 1711 aa25.32■■□□□ 1.64
COL16A1-207ENST00000466829 ATP10AO60312 1499 aa25.32■■□□□ 1.64
COL16A1-207ENST00000466829 PTPRMP28827 1452 aa25.31■■□□□ 1.64
COL16A1-207ENST00000466829 ADAMTSL3P82987 1691 aa25.3■■□□□ 1.64
COL16A1-207ENST00000466829 BCORL1Q5H9F3 1711 aa25.3■■□□□ 1.64
COL16A1-207ENST00000466829 GPATCH8Q9UKJ3 1502 aaKnown RBP25.3■■□□□ 1.64
COL16A1-207ENST00000466829 C9orf84Q5VXU9 1444 aa25.29■■□□□ 1.64
COL16A1-207ENST00000466829 TRAPPC8Q9Y2L5 1435 aa25.29■■□□□ 1.64
COL16A1-207ENST00000466829 HNRNPMP52272 730 aaKnown RBP eCLIP25.27■■□□□ 1.64
COL16A1-207ENST00000466829 ABCC1P33527 1531 aa25.27■■□□□ 1.64
COL16A1-207ENST00000466829 CDC42BPAQ5VT25 1732 aa25.26■■□□□ 1.63
COL16A1-207ENST00000466829 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
COL16A1-207ENST00000466829 MADDQ8WXG6 1647 aa25.25■■□□□ 1.63
COL16A1-207ENST00000466829 KDM5CP41229 1560 aa25.24■■□□□ 1.63
COL16A1-207ENST00000466829 EHBP1L1Q8N3D4 1523 aa25.24■■□□□ 1.63
COL16A1-207ENST00000466829 VPS8Q8N3P4 1428 aa25.23■■□□□ 1.63
COL16A1-207ENST00000466829 HECW2Q9P2P5 1572 aa25.22■■□□□ 1.63
COL16A1-207ENST00000466829 MLH3Q9UHC1 1453 aa25.21■■□□□ 1.63
COL16A1-207ENST00000466829 SPAG9O60271 1321 aaKnown RBP25.2■■□□□ 1.62
COL16A1-207ENST00000466829 PLEKHH2Q8IVE3 1493 aa25.19■■□□□ 1.62
COL16A1-207ENST00000466829 SAMD9LQ8IVG5 1584 aa25.18■■□□□ 1.62
COL16A1-207ENST00000466829 SYCP2Q9BX26 1530 aa25.18■■□□□ 1.62
COL16A1-207ENST00000466829 RIMS1Q86UR5 1692 aaKnown RBP25.18■■□□□ 1.62
COL16A1-207ENST00000466829 ITSN2Q9NZM3 1697 aa25.18■■□□□ 1.62
COL16A1-207ENST00000466829 SIGLEC1Q9BZZ2 1709 aa25.17■■□□□ 1.62
COL16A1-207ENST00000466829 ZNF644Q9H582 1327 aaPredicted RBP25.16■■□□□ 1.62
COL16A1-207ENST00000466829 KIAA1107Q9UPP5 1409 aa25.16■■□□□ 1.62
COL16A1-207ENST00000466829 ESF1Q9H501 851 aaKnown RBP25.15■■□□□ 1.62
COL16A1-207ENST00000466829 DIP2CQ9Y2E4 1556 aa25.14■■□□□ 1.62
COL16A1-207ENST00000466829 APLP2Q06481 763 aa25.14■■□□□ 1.62
COL16A1-207ENST00000466829 TIAM1Q13009 1591 aa25.13■■□□□ 1.61
COL16A1-207ENST00000466829 NCOA2Q15596 1464 aa25.12■■□□□ 1.61
COL16A1-207ENST00000466829 ABCA6Q8N139 1617 aa25.11■■□□□ 1.61
COL16A1-207ENST00000466829 SUPT6HQ7KZ85 1726 aaKnown RBP25.09■■□□□ 1.61
COL16A1-207ENST00000466829 CEBPAP49715 358 aaPredicted RBP25.07■■□□□ 1.6
COL16A1-207ENST00000466829 KANK4Q5T7N3 995 aaPredicted RBP25.07■■□□□ 1.6
COL16A1-207ENST00000466829 FER1L4A9Z1Z3 1794 aa25.07■■□□□ 1.6
COL16A1-207ENST00000466829 LRRC9Q6ZRR7 1453 aa25.07■■□□□ 1.6
COL16A1-207ENST00000466829 KIDINS220Q9ULH0 1771 aa25.06■■□□□ 1.6
COL16A1-207ENST00000466829 REREQ9P2R6 1566 aa25.05■■□□□ 1.6
COL16A1-207ENST00000466829 ATP7AQ04656 1500 aa25.03■■□□□ 1.6
COL16A1-207ENST00000466829 AGLP35573 1532 aa25.02■■□□□ 1.6
COL16A1-207ENST00000466829 HSPA2P54652 639 aa25■■□□□ 1.59
COL16A1-207ENST00000466829 RSPH4AQ5TD94 716 aa25■■□□□ 1.59
COL16A1-207ENST00000466829 MBD5Q9P267 1494 aa25■■□□□ 1.59
COL16A1-207ENST00000466829 MAP3K1Q13233 1512 aa24.99■■□□□ 1.59
COL16A1-207ENST00000466829 A2MP01023 1474 aa24.98■■□□□ 1.59
COL16A1-207ENST00000466829 CAMSAP2Q08AD1 1489 aa24.98■■□□□ 1.59
COL16A1-207ENST00000466829 LMTK3Q96Q04 1460 aa24.98■■□□□ 1.59
COL16A1-207ENST00000466829 TSPY4P0CV99 314 aa24.97■■□□□ 1.59
COL16A1-207ENST00000466829 TSPY10P0CW01 314 aa24.97■■□□□ 1.59
COL16A1-207ENST00000466829 GGT6Q6P531 493 aa24.97■■□□□ 1.59
COL16A1-207ENST00000466829 INO80Q9ULG1 1556 aaPredicted RBP24.95■■□□□ 1.58
COL16A1-207ENST00000466829 CCDC141Q6ZP82 1450 aa24.94■■□□□ 1.58
COL16A1-207ENST00000466829 RTEL1-TNFRSF6BF6WH68 1400 aa24.93■■□□□ 1.58
COL16A1-207ENST00000466829 CNTLNQ9NXG0 1405 aa24.92■■□□□ 1.58
COL16A1-207ENST00000466829 MYOM3Q5VTT5 1437 aa24.88■■□□□ 1.57
COL16A1-207ENST00000466829 DHX29Q7Z478 1369 aaKnown RBP24.87■■□□□ 1.57
COL16A1-207ENST00000466829 UHRF1BP1Q6BDS2 1440 aa24.86■■□□□ 1.57
COL16A1-207ENST00000466829 KIF3BO15066 747 aa24.86■■□□□ 1.57
COL16A1-207ENST00000466829 MIA2Q96PC5 1412 aa24.86■■□□□ 1.57
COL16A1-207ENST00000466829 ZMYM3Q14202 1370 aa24.85■■□□□ 1.57
COL16A1-207ENST00000466829 PLXNC1O60486 1568 aa24.84■■□□□ 1.57
COL16A1-207ENST00000466829 ADGBQ8N7X0 1667 aa24.84■■□□□ 1.57
COL16A1-207ENST00000466829 PPP6R1Q9UPN7 881 aa24.83■■□□□ 1.57
COL16A1-207ENST00000466829 ARHGEF5Q12774 1597 aa24.81■■□□□ 1.56
COL16A1-207ENST00000466829 C3P01024 1663 aa24.81■■□□□ 1.56
COL16A1-207ENST00000466829 PREX1Q8TCU6 1659 aa24.8■■□□□ 1.56
COL16A1-207ENST00000466829 ILDR1Q86SU0 546 aaPredicted RBP24.77■■□□□ 1.56
COL16A1-207ENST00000466829 WASHC2CQ9Y4E1 1318 aa24.75■■□□□ 1.55
COL16A1-207ENST00000466829 SETD1BQ9UPS6 1966 aaKnown RBP24.74■■□□□ 1.55
COL16A1-207ENST00000466829 NPATQ14207 1427 aa24.74■■□□□ 1.55
COL16A1-207ENST00000466829 CLTCQ00610 1675 aaKnown RBP24.74■■□□□ 1.55
COL16A1-207ENST00000466829 DMRT2Q9Y5R5 561 aa24.72■■□□□ 1.55
COL16A1-207ENST00000466829 MROH2AA6NES4 1674 aa24.72■■□□□ 1.55
COL16A1-207ENST00000466829 FGD6Q6ZV73 1430 aa24.7■■□□□ 1.55
COL16A1-207ENST00000466829 RRP7BPQ9NSQ0 103 aa24.69■■□□□ 1.54
COL16A1-207ENST00000466829 PTPN23Q9H3S7 1636 aa24.68■■□□□ 1.54
COL16A1-207ENST00000466829 FAM50AQ14320 339 aaKnown RBP24.68■■□□□ 1.54
COL16A1-207ENST00000466829 PTPRKQ15262 1439 aa24.67■■□□□ 1.54
COL16A1-207ENST00000466829 MAST1Q9Y2H9 1570 aa24.67■■□□□ 1.54
COL16A1-207ENST00000466829 CHIC2Q9UKJ5 165 aa24.66■■□□□ 1.54
COL16A1-207ENST00000466829 ABCC5O15440 1437 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms