RNA–Protein interactions for RNA: ENST00000466021.5

FGFR1-216, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-216ENST00000466021 POGZQ7Z3K3 1410 aa24.79■■□□□ 1.56
FGFR1-216ENST00000466021 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
FGFR1-216ENST00000466021 CLIP1P30622 1438 aa24.78■■□□□ 1.56
FGFR1-216ENST00000466021 MADDQ8WXG6 1647 aa24.78■■□□□ 1.56
FGFR1-216ENST00000466021 YEATS2Q9ULM3 1422 aa24.78■■□□□ 1.56
FGFR1-216ENST00000466021 EFCAB2Q5VUJ9 269 aa24.77■■□□□ 1.56
FGFR1-216ENST00000466021 MAGI2Q86UL8 1455 aa24.77■■□□□ 1.56
FGFR1-216ENST00000466021 CCDC18Q5T9S5 1454 aa24.75■■□□□ 1.55
FGFR1-216ENST00000466021 SIGLEC1Q9BZZ2 1709 aa24.73■■□□□ 1.55
FGFR1-216ENST00000466021 ARHGAP5Q13017 1502 aa24.73■■□□□ 1.55
FGFR1-216ENST00000466021 FYCO1Q9BQS8 1478 aa24.7■■□□□ 1.55
FGFR1-216ENST00000466021 RIMS1Q86UR5 1692 aaKnown RBP24.69■■□□□ 1.54
FGFR1-216ENST00000466021 CDC42BPBQ9Y5S2 1711 aa24.67■■□□□ 1.54
FGFR1-216ENST00000466021 ZNF518AQ6AHZ1 1483 aa24.66■■□□□ 1.54
FGFR1-216ENST00000466021 PREX2Q70Z35 1606 aa24.65■■□□□ 1.54
FGFR1-216ENST00000466021 ATP10AO60312 1499 aa24.64■■□□□ 1.53
FGFR1-216ENST00000466021 KDM5CP41229 1560 aa24.63■■□□□ 1.53
FGFR1-216ENST00000466021 C9orf84Q5VXU9 1444 aa24.61■■□□□ 1.53
FGFR1-216ENST00000466021 AFAP1Q8N556 730 aa24.61■■□□□ 1.53
FGFR1-216ENST00000466021 MLECQ14165 292 aa24.59■■□□□ 1.53
FGFR1-216ENST00000466021 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.53
FGFR1-216ENST00000466021 ABCC1P33527 1531 aa24.58■■□□□ 1.53
FGFR1-216ENST00000466021 FER1L4A9Z1Z3 1794 aa24.57■■□□□ 1.52
FGFR1-216ENST00000466021 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
FGFR1-216ENST00000466021 LMTK3Q96Q04 1460 aa24.56■■□□□ 1.52
FGFR1-216ENST00000466021 ITSN2Q9NZM3 1697 aa24.55■■□□□ 1.52
FGFR1-216ENST00000466021 ILDR1Q86SU0 546 aaPredicted RBP24.54■■□□□ 1.52
FGFR1-216ENST00000466021 DIP2CQ9Y2E4 1556 aa24.54■■□□□ 1.52
FGFR1-216ENST00000466021 TRAPPC8Q9Y2L5 1435 aa24.53■■□□□ 1.52
FGFR1-216ENST00000466021 PLPPR3Q6T4P5 718 aa24.53■■□□□ 1.52
FGFR1-216ENST00000466021 MYT1LQ9UL68 1186 aa24.53■■□□□ 1.52
FGFR1-216ENST00000466021 MLH3Q9UHC1 1453 aa24.52■■□□□ 1.52
FGFR1-216ENST00000466021 ABCA6Q8N139 1617 aa24.51■■□□□ 1.51
FGFR1-216ENST00000466021 GPATCH8Q9UKJ3 1502 aaKnown RBP24.49■■□□□ 1.51
FGFR1-216ENST00000466021 REREQ9P2R6 1566 aa24.49■■□□□ 1.51
FGFR1-216ENST00000466021 SAMD9LQ8IVG5 1584 aa24.47■■□□□ 1.51
FGFR1-216ENST00000466021 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
FGFR1-216ENST00000466021 ZNF777Q9ULD5 760 aaPredicted RBP24.46■■□□□ 1.51
FGFR1-216ENST00000466021 MTUS2Q5JR59 1369 aa24.44■■□□□ 1.5
FGFR1-216ENST00000466021 SYCP2Q9BX26 1530 aa24.44■■□□□ 1.5
FGFR1-216ENST00000466021 KIDINS220Q9ULH0 1771 aa24.44■■□□□ 1.5
FGFR1-216ENST00000466021 CCNB3Q8WWL7 1395 aa24.42■■□□□ 1.5
FGFR1-216ENST00000466021 HSPA2P54652 639 aa24.41■■□□□ 1.5
FGFR1-216ENST00000466021 AGLP35573 1532 aa24.4■■□□□ 1.5
FGFR1-216ENST00000466021 CFDP1Q9UEE9 299 aaPredicted RBP24.39■■□□□ 1.49
FGFR1-216ENST00000466021 CEBPAP49715 358 aaPredicted RBP24.38■■□□□ 1.49
FGFR1-216ENST00000466021 EHBP1L1Q8N3D4 1523 aa24.38■■□□□ 1.49
FGFR1-216ENST00000466021 HNRNPMP52272 730 aaKnown RBP eCLIP24.37■■□□□ 1.49
FGFR1-216ENST00000466021 PLEKHH2Q8IVE3 1493 aa24.37■■□□□ 1.49
FGFR1-216ENST00000466021 KIAA1107Q9UPP5 1409 aa24.36■■□□□ 1.49
FGFR1-216ENST00000466021 PREX1Q8TCU6 1659 aa24.35■■□□□ 1.49
FGFR1-216ENST00000466021 TIAM1Q13009 1591 aa24.35■■□□□ 1.49
FGFR1-216ENST00000466021 SPAG9O60271 1321 aaKnown RBP24.35■■□□□ 1.49
FGFR1-216ENST00000466021 ATP7AQ04656 1500 aa24.32■■□□□ 1.48
FGFR1-216ENST00000466021 INO80Q9ULG1 1556 aaPredicted RBP24.31■■□□□ 1.48
FGFR1-216ENST00000466021 C3P01024 1663 aa24.3■■□□□ 1.48
FGFR1-216ENST00000466021 ESF1Q9H501 851 aaKnown RBP24.28■■□□□ 1.48
FGFR1-216ENST00000466021 ZNF644Q9H582 1327 aaPredicted RBP24.28■■□□□ 1.48
FGFR1-216ENST00000466021 LOC105371045A0A1W2PR82 267 aa24.26■■□□□ 1.47
FGFR1-216ENST00000466021 SUPT6HQ7KZ85 1726 aaKnown RBP24.26■■□□□ 1.47
FGFR1-216ENST00000466021 UHRF1BP1Q6BDS2 1440 aa24.25■■□□□ 1.47
FGFR1-216ENST00000466021 CNTLNQ9NXG0 1405 aa24.25■■□□□ 1.47
FGFR1-216ENST00000466021 PLXNC1O60486 1568 aa24.25■■□□□ 1.47
FGFR1-216ENST00000466021 MBD5Q9P267 1494 aa24.24■■□□□ 1.47
FGFR1-216ENST00000466021 NCOA2Q15596 1464 aa24.23■■□□□ 1.47
FGFR1-216ENST00000466021 SETD1BQ9UPS6 1966 aaKnown RBP24.23■■□□□ 1.47
FGFR1-216ENST00000466021 A2MP01023 1474 aa24.22■■□□□ 1.47
FGFR1-216ENST00000466021 FBXO41Q8TF61 875 aa24.22■■□□□ 1.47
FGFR1-216ENST00000466021 VPS8Q8N3P4 1428 aa24.21■■□□□ 1.47
FGFR1-216ENST00000466021 MROH2AA6NES4 1674 aa24.19■■□□□ 1.46
FGFR1-216ENST00000466021 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
FGFR1-216ENST00000466021 CAMSAP2Q08AD1 1489 aa24.16■■□□□ 1.46
FGFR1-216ENST00000466021 STRCQ7RTU9 1775 aa24.16■■□□□ 1.46
FGFR1-216ENST00000466021 RTEL1-TNFRSF6BF6WH68 1400 aa24.15■■□□□ 1.46
FGFR1-216ENST00000466021 CLTCQ00610 1675 aaKnown RBP24.14■■□□□ 1.45
FGFR1-216ENST00000466021 ZMYM3Q14202 1370 aa24.14■■□□□ 1.45
FGFR1-216ENST00000466021 LRRC9Q6ZRR7 1453 aa24.13■■□□□ 1.45
FGFR1-216ENST00000466021 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
FGFR1-216ENST00000466021 NPATQ14207 1427 aa24.12■■□□□ 1.45
FGFR1-216ENST00000466021 GGT6Q6P531 493 aa24.11■■□□□ 1.45
FGFR1-216ENST00000466021 DMRT2Q9Y5R5 561 aa24.09■■□□□ 1.45
FGFR1-216ENST00000466021 DHX29Q7Z478 1369 aaKnown RBP24.07■■□□□ 1.44
FGFR1-216ENST00000466021 MAP3K1Q13233 1512 aa24.07■■□□□ 1.44
FGFR1-216ENST00000466021 RSPH4AQ5TD94 716 aa24.06■■□□□ 1.44
FGFR1-216ENST00000466021 CERKQ8TCT0 537 aa24.06■■□□□ 1.44
FGFR1-216ENST00000466021 ARHGEF5Q12774 1597 aa24.06■■□□□ 1.44
FGFR1-216ENST00000466021 PPP6R1Q9UPN7 881 aa24.05■■□□□ 1.44
FGFR1-216ENST00000466021 KANK4Q5T7N3 995 aaPredicted RBP24.04■■□□□ 1.44
FGFR1-216ENST00000466021 PTPRKQ15262 1439 aa24.03■■□□□ 1.44
FGFR1-216ENST00000466021 NCOA1Q15788 1441 aa24.02■■□□□ 1.44
FGFR1-216ENST00000466021 MYO3AQ8NEV4 1616 aa24.02■■□□□ 1.44
FGFR1-216ENST00000466021 PTPRTO14522 1441 aa24.01■■□□□ 1.43
FGFR1-216ENST00000466021 CAMSAP1Q5T5Y3 1602 aa23.99■■□□□ 1.43
FGFR1-216ENST00000466021 KIF3BO15066 747 aa23.99■■□□□ 1.43
FGFR1-216ENST00000466021 ZNF142P52746 1687 aaPredicted RBP23.99■■□□□ 1.43
FGFR1-216ENST00000466021 TSPY4P0CV99 314 aa23.98■■□□□ 1.43
FGFR1-216ENST00000466021 TSPY10P0CW01 314 aa23.98■■□□□ 1.43
FGFR1-216ENST00000466021 MYOM3Q5VTT5 1437 aa23.97■■□□□ 1.43
FGFR1-216ENST00000466021 CEP170BQ9Y4F5 1589 aaPredicted RBP23.96■■□□□ 1.43
FGFR1-216ENST00000466021 MIA2Q96PC5 1412 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms