RNA–Protein interactions for RNA: ENST00000466021.5

FGFR1-216, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 2

Gene FGFR1, Length 823 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-216ENST00000466021 NISCHQ9Y2I1 1504 aa37.9■■■■□ 3.66
FGFR1-216ENST00000466021 CCDC180Q9P1Z9 1646 aa33.96■■■■□ 3.03
FGFR1-216ENST00000466021 ABCC9O60706 1549 aa33.8■■■■□ 3
FGFR1-216ENST00000466021 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
FGFR1-216ENST00000466021 NACADO15069 1562 aa32.05■■■□□ 2.72
FGFR1-216ENST00000466021 DCAF8L2P0C7V8 631 aa31.9■■■□□ 2.7
FGFR1-216ENST00000466021 MYO15BQ96JP2 1530 aa31.66■■■□□ 2.66
FGFR1-216ENST00000466021 DNAJC5BQ9UF47 199 aa31.56■■■□□ 2.64
FGFR1-216ENST00000466021 UNC13AQ9UPW8 1703 aa31.52■■■□□ 2.64
FGFR1-216ENST00000466021 PABPN1Q86U42 306 aaKnown RBP eCLIP31.48■■■□□ 2.63
FGFR1-216ENST00000466021 ZCCHC6Q5VYS8 1495 aaKnown RBP31.45■■■□□ 2.62
FGFR1-216ENST00000466021 BICRAQ9NZM4 1560 aa31.31■■■□□ 2.6
FGFR1-216ENST00000466021 DCAF1Q9Y4B6 1507 aa31.31■■■□□ 2.6
FGFR1-216ENST00000466021 SCRIBQ14160 1630 aa30.95■■■□□ 2.55
FGFR1-216ENST00000466021 SHROOM4Q9ULL8 1493 aa30.89■■■□□ 2.54
FGFR1-216ENST00000466021 CC2D2AQ9P2K1 1620 aa30.55■■■□□ 2.48
FGFR1-216ENST00000466021 EIF4G1Q04637 1599 aaKnown RBP30.52■■■□□ 2.48
FGFR1-216ENST00000466021 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
FGFR1-216ENST00000466021 NCAPD3P42695 1498 aa29.59■■■□□ 2.33
FGFR1-216ENST00000466021 SMARCA4P51532 1647 aa29.54■■■□□ 2.32
FGFR1-216ENST00000466021 ATAD2BQ9ULI0 1458 aa29.52■■■□□ 2.32
FGFR1-216ENST00000466021 SMARCA2P51531 1590 aa29.45■■■□□ 2.31
FGFR1-216ENST00000466021 BAZ1AQ9NRL2 1556 aaPredicted RBP29.41■■■□□ 2.3
FGFR1-216ENST00000466021 HMGXB3Q12766 1538 aa29.4■■■□□ 2.3
FGFR1-216ENST00000466021 BAZ1BQ9UIG0 1483 aaKnown RBP29.25■■■□□ 2.27
FGFR1-216ENST00000466021 PEG3Q9GZU2 1588 aa29.25■■■□□ 2.27
FGFR1-216ENST00000466021 MROH2BQ7Z745 1585 aa29.21■■■□□ 2.27
FGFR1-216ENST00000466021 ERCC6Q03468 1493 aa29.17■■■□□ 2.26
FGFR1-216ENST00000466021 NESP48681 1621 aa29.09■■■□□ 2.25
FGFR1-216ENST00000466021 CUX2O14529 1486 aa29.06■■■□□ 2.24
FGFR1-216ENST00000466021 LAMC3Q9Y6N6 1575 aa28.9■■■□□ 2.22
FGFR1-216ENST00000466021 WIZO95785 1651 aa28.87■■■□□ 2.21
FGFR1-216ENST00000466021 DNAJC5Q9H3Z4 198 aa28.86■■■□□ 2.21
FGFR1-216ENST00000466021 THOC2Q8NI27 1593 aaKnown RBP28.77■■■□□ 2.2
FGFR1-216ENST00000466021 KIF21AQ7Z4S6 1674 aa28.73■■■□□ 2.19
FGFR1-216ENST00000466021 PDS5BQ9NTI5 1447 aa28.71■■■□□ 2.19
FGFR1-216ENST00000466021 CADPSQ9ULU8 1353 aa28.69■■■□□ 2.18
FGFR1-216ENST00000466021 RSF1Q96T23 1441 aaPredicted RBP28.65■■■□□ 2.18
FGFR1-216ENST00000466021 TOP2AP11388 1531 aaKnown RBP28.52■■■□□ 2.16
FGFR1-216ENST00000466021 MRC2Q9UBG0 1479 aa28.47■■■□□ 2.15
FGFR1-216ENST00000466021 WDR62O43379 1518 aa28.41■■■□□ 2.14
FGFR1-216ENST00000466021 CFTRP13569 1480 aa28.4■■■□□ 2.14
FGFR1-216ENST00000466021 CEP164Q9UPV0 1460 aa28.39■■■□□ 2.13
FGFR1-216ENST00000466021 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
FGFR1-216ENST00000466021 CCDC88BA6NC98 1476 aa28.19■■■□□ 2.1
FGFR1-216ENST00000466021 PRDM2Q13029 1718 aa28.15■■■□□ 2.1
FGFR1-216ENST00000466021 URB2Q14146 1524 aaKnown RBP28.14■■■□□ 2.1
FGFR1-216ENST00000466021 TOPBP1Q92547 1522 aa27.86■■■□□ 2.05
FGFR1-216ENST00000466021 IFT140Q96RY7 1462 aa27.82■■■□□ 2.04
FGFR1-216ENST00000466021 ABCC8Q09428 1581 aa27.79■■■□□ 2.04
FGFR1-216ENST00000466021 DNMBPQ6XZF7 1577 aa27.77■■■□□ 2.04
FGFR1-216ENST00000466021 ZNF608Q9ULD9 1512 aaPredicted RBP27.77■■■□□ 2.04
FGFR1-216ENST00000466021 OSCARQ8IYS5 282 aa27.74■■■□□ 2.03
FGFR1-216ENST00000466021 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
FGFR1-216ENST00000466021 EIF4G3O43432 1585 aaKnown RBP27.63■■■□□ 2.01
FGFR1-216ENST00000466021 TARBP1Q13395 1621 aaKnown RBP27.61■■■□□ 2.01
FGFR1-216ENST00000466021 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
FGFR1-216ENST00000466021 AQRO60306 1485 aaKnown RBP eCLIP27.52■■■□□ 2
FGFR1-216ENST00000466021 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
FGFR1-216ENST00000466021 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
FGFR1-216ENST00000466021 SOGA1O94964 1423 aa27.44■■□□□ 1.98
FGFR1-216ENST00000466021 CUX1P39880 1505 aa27.44■■□□□ 1.98
FGFR1-216ENST00000466021 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
FGFR1-216ENST00000466021 CHD1O14646 1710 aa27.4■■□□□ 1.98
FGFR1-216ENST00000466021 RIMBP3CA6NJZ7 1639 aa27.4■■□□□ 1.98
FGFR1-216ENST00000466021 RIMBP3BA6NNM3 1639 aa27.4■■□□□ 1.98
FGFR1-216ENST00000466021 RIMBP3Q9UFD9 1639 aa27.4■■□□□ 1.98
FGFR1-216ENST00000466021 TDRD9Q8NDG6 1382 aaKnown RBP27.38■■□□□ 1.97
FGFR1-216ENST00000466021 ARHGEF11O15085 1522 aa27.33■■□□□ 1.97
FGFR1-216ENST00000466021 WDR97A6NE52 1622 aa27.32■■□□□ 1.96
FGFR1-216ENST00000466021 FBLN2P98095 1184 aa27.3■■□□□ 1.96
FGFR1-216ENST00000466021 SNAPC4Q5SXM2 1469 aa27.25■■□□□ 1.95
FGFR1-216ENST00000466021 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
FGFR1-216ENST00000466021 MAGI1Q96QZ7 1491 aaPredicted RBP27.19■■□□□ 1.94
FGFR1-216ENST00000466021 ABCA10Q8WWZ4 1543 aa27.13■■□□□ 1.93
FGFR1-216ENST00000466021 GAPVD1Q14C86 1478 aa27.13■■□□□ 1.93
FGFR1-216ENST00000466021 PBRM1Q86U86 1689 aa27.12■■□□□ 1.93
FGFR1-216ENST00000466021 CHMP7Q8WUX9 453 aaPredicted RBP27.12■■□□□ 1.93
FGFR1-216ENST00000466021 SYNJ2O15056 1496 aa27.1■■□□□ 1.93
FGFR1-216ENST00000466021 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
FGFR1-216ENST00000466021 CYB5RLQ6IPT4 315 aa27.09■■□□□ 1.93
FGFR1-216ENST00000466021 CLASP1Q7Z460 1538 aa27.08■■□□□ 1.93
FGFR1-216ENST00000466021 SYNJ1O43426 1573 aa27.07■■□□□ 1.92
FGFR1-216ENST00000466021 ARAP1Q96P48 1450 aa27.06■■□□□ 1.92
FGFR1-216ENST00000466021 BIVM-ERCC5R4GMW8 1640 aa27.05■■□□□ 1.92
FGFR1-216ENST00000466021 WRNQ14191 1432 aaPredicted RBP eCLIP27.04■■□□□ 1.92
FGFR1-216ENST00000466021 TOP2BQ02880 1626 aa27.04■■□□□ 1.92
FGFR1-216ENST00000466021 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
FGFR1-216ENST00000466021 GRIN2AQ12879 1464 aa26.86■■□□□ 1.89
FGFR1-216ENST00000466021 ERICH3Q5RHP9 1530 aa26.79■■□□□ 1.88
FGFR1-216ENST00000466021 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
FGFR1-216ENST00000466021 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
FGFR1-216ENST00000466021 NUP160Q12769 1436 aa26.76■■□□□ 1.87
FGFR1-216ENST00000466021 TRHP20396 242 aaPredicted RBP26.73■■□□□ 1.87
FGFR1-216ENST00000466021 ERCC6L2Q5T890 1561 aa26.67■■□□□ 1.86
FGFR1-216ENST00000466021 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
FGFR1-216ENST00000466021 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
FGFR1-216ENST00000466021 RUSC2Q8N2Y8 1516 aa26.49■■□□□ 1.83
FGFR1-216ENST00000466021 PRG4Q92954 1404 aaPredicted RBP26.48■■□□□ 1.83
FGFR1-216ENST00000466021 IGF1RP08069 1367 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms