RNA–Protein interactions for RNA: ENST00000465741.1

SPTA1-203, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 718 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-203ENST00000465741 C3orf67Q6ZVT6 689 aa13.78□□□□□ -0.2
SPTA1-203ENST00000465741 L3MBTL3Q96JM7 780 aaPredicted RBP13.78□□□□□ -0.2
SPTA1-203ENST00000465741 TSHZ2Q9NRE2 1034 aa13.78□□□□□ -0.2
SPTA1-203ENST00000465741 GTPBP6O43824 516 aaPredicted RBP13.77□□□□□ -0.21
SPTA1-203ENST00000465741 POTEB3A0JP26 581 aa13.76□□□□□ -0.21
SPTA1-203ENST00000465741 POTEBQ6S5H4 581 aa13.76□□□□□ -0.21
SPTA1-203ENST00000465741 KDM2AQ9Y2K7 1162 aa13.72□□□□□ -0.21
SPTA1-203ENST00000465741 EMP3P54852 163 aa13.7□□□□□ -0.22
SPTA1-203ENST00000465741 KRTAP3-3Q9BYR6 98 aa13.69□□□□□ -0.22
SPTA1-203ENST00000465741 KRTAP3-2Q9BYR7 98 aa13.69□□□□□ -0.22
SPTA1-203ENST00000465741 CABP2Q9NPB3 220 aa13.68□□□□□ -0.22
SPTA1-203ENST00000465741 BCANQ96GW7 911 aa13.67□□□□□ -0.22
SPTA1-203ENST00000465741 HS3ST6Q96QI5 342 aa13.66□□□□□ -0.22
SPTA1-203ENST00000465741 HOXB3P14651 431 aaPredicted RBP13.63□□□□□ -0.23
SPTA1-203ENST00000465741 FAM205CA6NFA0 338 aa13.62□□□□□ -0.23
SPTA1-203ENST00000465741 BOLA1Q9Y3E2 137 aa13.61□□□□□ -0.23
SPTA1-203ENST00000465741 SOX12O15370 315 aa13.56□□□□□ -0.24
SPTA1-203ENST00000465741 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
SPTA1-203ENST00000465741 NLRP6P59044 892 aa13.54□□□□□ -0.24
SPTA1-203ENST00000465741 EFCAB3Q8N7B9 438 aa13.54□□□□□ -0.24
SPTA1-203ENST00000465741 HOXB1P14653 301 aaPredicted RBP13.49□□□□□ -0.25
SPTA1-203ENST00000465741 G3V3G9 751 aa13.47□□□□□ -0.25
SPTA1-203ENST00000465741 TMEM92Q6UXU6 159 aa13.47□□□□□ -0.25
SPTA1-203ENST00000465741 FBXO22Q8NEZ5 403 aa13.46□□□□□ -0.25
SPTA1-203ENST00000465741 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
SPTA1-203ENST00000465741 NBR1Q14596 966 aa13.4□□□□□ -0.26
SPTA1-203ENST00000465741 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
SPTA1-203ENST00000465741 MICALL2Q8IY33 904 aa13.4□□□□□ -0.26
SPTA1-203ENST00000465741 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
SPTA1-203ENST00000465741 MS4A4AQ96JQ5 239 aa13.4□□□□□ -0.26
SPTA1-203ENST00000465741 WDR70Q9NW82 654 aa13.39□□□□□ -0.27
SPTA1-203ENST00000465741 ERBB3P21860 1342 aa13.37□□□□□ -0.27
SPTA1-203ENST00000465741 PPP1R37O75864 691 aa13.36□□□□□ -0.27
SPTA1-203ENST00000465741 P3H3Q8IVL6 736 aa13.36□□□□□ -0.27
SPTA1-203ENST00000465741 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
SPTA1-203ENST00000465741 VARS2Q5ST30 1063 aaKnown RBP13.32□□□□□ -0.28
SPTA1-203ENST00000465741 GPR153Q6NV75 609 aa13.3□□□□□ -0.28
SPTA1-203ENST00000465741 RIMBP2O15034 1052 aa13.26□□□□□ -0.29
SPTA1-203ENST00000465741 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
SPTA1-203ENST00000465741 PDE4AP27815 886 aa13.22□□□□□ -0.29
SPTA1-203ENST00000465741 ZNF687Q8N1G0 1237 aa13.22□□□□□ -0.29
SPTA1-203ENST00000465741 RNF166Q96A37 237 aaPredicted RBP13.22□□□□□ -0.29
SPTA1-203ENST00000465741 ARSIQ5FYB1 569 aa13.18□□□□□ -0.3
SPTA1-203ENST00000465741 KCNV2Q8TDN2 545 aa13.18□□□□□ -0.3
SPTA1-203ENST00000465741 KHSRPQ92945 711 aaKnown RBP eCLIP13.18□□□□□ -0.3
SPTA1-203ENST00000465741 E2F4Q16254 413 aa13.16□□□□□ -0.3
SPTA1-203ENST00000465741 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
SPTA1-203ENST00000465741 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
SPTA1-203ENST00000465741 TPRNQ4KMQ1 711 aa13.14□□□□□ -0.31
SPTA1-203ENST00000465741 LARP6Q9BRS8 491 aaKnown RBP13.14□□□□□ -0.31
SPTA1-203ENST00000465741 CRISPLD2Q9H0B8 497 aa13.14□□□□□ -0.31
SPTA1-203ENST00000465741 MFSD10Q14728 455 aa13.12□□□□□ -0.31
SPTA1-203ENST00000465741 DDX27Q96GQ7 796 aaKnown RBP13.12□□□□□ -0.31
SPTA1-203ENST00000465741 ARHGEF1Q92888 912 aaKnown RBP13.11□□□□□ -0.31
SPTA1-203ENST00000465741 ZNF316A6NFI3 1004 aaPredicted RBP13.09□□□□□ -0.31
SPTA1-203ENST00000465741 KIF3CO14782 793 aa13.09□□□□□ -0.31
SPTA1-203ENST00000465741 PRKCSHP14314 528 aaPredicted RBP13.08□□□□□ -0.32
SPTA1-203ENST00000465741 GPHNQ9NQX3 736 aaPredicted RBP13.05□□□□□ -0.32
SPTA1-203ENST00000465741 C2orf72A6NCS6 295 aa13.03□□□□□ -0.32
SPTA1-203ENST00000465741 TULP1O00294 542 aaPredicted RBP13.03□□□□□ -0.32
SPTA1-203ENST00000465741 ANKRD13DQ6ZTN6 518 aa13.02□□□□□ -0.33
SPTA1-203ENST00000465741 PPP1R15BQ5SWA1 713 aa13.01□□□□□ -0.33
SPTA1-203ENST00000465741 POTEEQ6S8J3 1075 aa13.01□□□□□ -0.33
SPTA1-203ENST00000465741 TMC2Q8TDI7 906 aa13.01□□□□□ -0.33
SPTA1-203ENST00000465741 PTGER2P43116 358 aa13□□□□□ -0.33
SPTA1-203ENST00000465741 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
SPTA1-203ENST00000465741 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
SPTA1-203ENST00000465741 NUDT7P0C024 238 aa12.98□□□□□ -0.33
SPTA1-203ENST00000465741 ARIH1Q9Y4X5 557 aaPredicted RBP12.98□□□□□ -0.33
SPTA1-203ENST00000465741 LHX6Q9UPM6 363 aa12.95□□□□□ -0.34
SPTA1-203ENST00000465741 FOXK1P85037 733 aa12.93□□□□□ -0.34
SPTA1-203ENST00000465741 PCDHGA4Q9Y5G9 962 aa12.93□□□□□ -0.34
SPTA1-203ENST00000465741 CCDC180Q9P1Z9 1646 aa12.92□□□□□ -0.34
SPTA1-203ENST00000465741 AXIN2Q9Y2T1 843 aa12.92□□□□□ -0.34
SPTA1-203ENST00000465741 SLC34A2O95436 690 aa12.91□□□□□ -0.34
SPTA1-203ENST00000465741 DSG2Q14126 1118 aa12.91□□□□□ -0.34
SPTA1-203ENST00000465741 SMYD5Q6GMV2 418 aa12.9□□□□□ -0.34
SPTA1-203ENST00000465741 LMOD2Q6P5Q4 547 aa12.89□□□□□ -0.35
SPTA1-203ENST00000465741 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTA1-203ENST00000465741 TESPA1A2RU30 521 aaPredicted RBP12.88□□□□□ -0.35
SPTA1-203ENST00000465741 SEMA3EO15041 775 aa12.88□□□□□ -0.35
SPTA1-203ENST00000465741 PBX2P40425 430 aa12.88□□□□□ -0.35
SPTA1-203ENST00000465741 PLPP6Q8IY26 295 aa12.86□□□□□ -0.35
SPTA1-203ENST00000465741 KDM4FA0A1W2PPD8 638 aa12.84□□□□□ -0.35
SPTA1-203ENST00000465741 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
SPTA1-203ENST00000465741 EMILIN3Q9NT22 766 aa12.81□□□□□ -0.36
SPTA1-203ENST00000465741 DPYSL4O14531 572 aa12.8□□□□□ -0.36
SPTA1-203ENST00000465741 PDIA6Q15084 440 aa12.78□□□□□ -0.36
SPTA1-203ENST00000465741 ADGRD1Q6QNK2 874 aa12.76□□□□□ -0.37
SPTA1-203ENST00000465741 ABCC9O60706 1549 aa12.76□□□□□ -0.37
SPTA1-203ENST00000465741 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
SPTA1-203ENST00000465741 MAP3K9P80192 1104 aa12.74□□□□□ -0.37
SPTA1-203ENST00000465741 PTCD2Q8WV60 388 aaKnown RBP12.74□□□□□ -0.37
SPTA1-203ENST00000465741 DMRTA1Q5VZB9 504 aa12.73□□□□□ -0.37
SPTA1-203ENST00000465741 PLA2G2EQ9NZK7 142 aa12.72□□□□□ -0.37
SPTA1-203ENST00000465741 HRO43593 1189 aa12.71□□□□□ -0.37
SPTA1-203ENST00000465741 PSEN2P49810 448 aa12.7□□□□□ -0.38
SPTA1-203ENST00000465741 MLLT3P42568 568 aaPredicted RBP12.69□□□□□ -0.38
SPTA1-203ENST00000465741 ZC3H15Q8WU90 426 aaKnown RBP12.69□□□□□ -0.38
SPTA1-203ENST00000465741 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms